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Revision as of 14:47, 9 April 2008

multiple endproducts of genes Protein Ontology RnaO GO SO PATO MAO RNA and protein sequences and structures NCBI Taxonomy Data formats, NCBI data model http://www.ncbi.nlm.nih.gov/IEB/ToolBox/SDKDOCS/DATAMODL.HTML

Ontologies	PRO/PROEVO	http://www.bioontology.org/wiki/index.php/PRO
in development
protein structure, function	implementation
http://roc.bgsu.edu/	RNA sequence, structure, motifs, alignments	in development
implementation
implementation
http://www.bioontology.org/wiki/index.php/PATO	phenotypic and trait ontology implementation
http://bips.u-strasbg.fr/LBGI/MAO/mao.html	multiple alignments of DNA,
implementation
http://www.ncbi.nlm.nih.gov/Taxonomy/	Organismal classification, genetic code	used widely
database schemas
sequences, alignments, annotations used at NCBI

@@ Line 1: / Line 1: @@
 {|
 |-
-!a
+!Ontologies
-!b
+!PRO/PROEVO
+!http://www.bioontology.org/wiki/index.php/PRO
+!protein evolutionary families,
 |-
-|c
+	    multiple endproducts of genes
-|d
+|in development
-|}
+|-
+Protein Ontology
+|http://proteinontology.info/	|protein structure, function
+|implementation
+|-
+RnaO
+|http://roc.bgsu.edu/
+|RNA sequence, structure, motifs, alignments
+|in development
+|-
+GO
+|	implementation
+|-
+SO
+|	implementation
+|-
+PATO
+|http://www.bioontology.org/wiki/index.php/PATO
+|phenotypic and trait ontology
+	implementation
+|-
+MAO
+|http://bips.u-strasbg.fr/LBGI/MAO/mao.html
+|multiple alignments of DNA,
+|-
+RNA and protein sequences and structures
+|implementation
+|-
+NCBI Taxonomy
+|http://www.ncbi.nlm.nih.gov/Taxonomy/
+|Organismal classification, genetic code
+|used widely
+|-
+Data formats,
+| database schemas
+|-
+NCBI data model	http://www.ncbi.nlm.nih.gov/IEB/ToolBox/SDKDOCS/DATAMODL.HTML
+|sequences, alignments, annotations	used at NCBI