Wiki Table Editor

From Wiki

Revision as of 07:41, 10 April 2008 (edit) Ripp (Talk | contribs) ← Previous diff		Current revision (07:45, 10 April 2008) (edit) (undo) Ripp (Talk | contribs)
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	{|		{|
	|CIC		|CIC
-	|Code	+	!Code
-	|Date	+	!Date
-	|Sex	+	!Sex
-	|I1	+	!I1
-	|I2	+	!I2
-	|StaTube-Ref	+	!StaTube-Ref
-	|StaTube-Con	+	!StaTube-Con
-	|DateEx-Ref	+	!DateEx-Ref
-	|DateEx-Con	+	!DateEx-Con
-	|Dose-Ref	+	!Dose-Ref
-	|Dose-Con	+	!Dose-Con
-	|Quant-Ref	+	!Quant-Ref
-	|Quant-Con	+	!Quant-Con
-	|R260280-Ref	+	!R260280-Ref
-	|R260280-Con	+	!R260280-Con
-	|R230260-Ref	+	!R230260-Ref
	|-		|-
	|		|
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	|-		|-
	|.201		|.201
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-	|
-	|
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-	|
-	|-
-	|CIC00005
-	|5TIR
-	|18/07/1947
-	|M
-	|129 112
-	|102063
-	|
-	|
-	|15/03/2007
-	|16/03/2007
-	|370.2
-	|155
-	|277.65
-	|116.25
-	|1.84
-	|1.80
-	|1.77
-	|1.79
-	|0.209
-	|0.210
-	|0.370
-	|0.27
-	|0.201
-	|0.28
-	|-
-	|
	|		|
	|		|
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---

Current revision

The Wiki Table Editor allows to create tables

here is an example : 

CIC	Code	Date	Sex	I1	I2	StaTube-Ref	StaTube-Con	DateEx-Ref	DateEx-Con	Dose-Ref	Dose-Con	Quant-Ref	Quant-Con	R260280-Ref	R260280-Con	R230260-Ref
	R230260-Con	A230-Ref	A230-Con	A260-Ref	A260-Con	A280-Ref	A280-Con	NuGel-Ref	NuGel-Con	PoGel-Ref	PoGel-Con	Image-Ref	Image-Con
CIC00001	1JOS	16/11/1973	M	129 104	102055			15/03/2007	15/03/2007	276.7	255.3	207.53	191.48	1.9	1.96	1.72	1.75	0.195	0.190	0.277	0.255	0.145	0.
151
CIC00002	2KUF	23/09/1939	F	129 102	102053			15/03/2007	15/03/2007	117.7	186.4	88.28	139.8	1.92	2.01	1.79	1.82	0.191	0.196	0.118	0.245	0.161	0.1
50
CIC00003	3EVO	05/02/1958	M	129 115	102066			15/03/2007	16/03/2007	423.8	161.06	317.85	120.8	1.85	1.85	1.82	1.72	0.233	0.113	0.424	0.161	0.229	0
.087
CIC00004	4PAL	06/02/1968	F	129 113	102064			15/03/2007	16/03/2007	376.6	270.2	282.45	202.65	1.84	1.88	1.70	1.90	0.222	0.214	0.377	0.258	0.204	0
.201

PRO/PROEVO	http://www.bioontology.org/wiki/index.php/PRO	protein evolutionary families, multiple endproducts of genes	in development
Protein Ontology	http://proteinontology.info/	protein structure, function	implementation
RnaO	http://roc.bgsu.edu/	RNA sequence, structure, motifs, alignments	in development
GO			implementation
SO			implementation
PATO	http://www.bioontology.org/wiki/index.php/PATO	phenotypic and trait ontology	implementation
MAO	http://bips.u-strasbg.fr/LBGI/MAO/mao.html	multiple alignments of DNA,
RNA and protein sequences and structures	implementation
NCBI Taxonomy	http://www.ncbi.nlm.nih.gov/Taxonomy/	Organismal classification,
genetic code	used widely
Data formats, database schemas
NCBI data model	http://www.ncbi.nlm.nih.gov/IEB/ToolBox/SDKDOCS/DATAMODL.HTML	sequences, alignments, annotations	used at NCBI
NEXUS format	Maddison, et al., 1997	character data, trees, assumptions, sets, notes	used widely
NeXML	https://www.nescent.org/wg_evoinfo/Future_Data_Exchange_Standard	character data, trees, models, meta-info	in development
pPOD		processing of data related to phylogenetic analysis workflows	in development
CHADO	http://www.gmod.org/wiki/index.php/Schema	sequence, genotypes, phenotypes, phylogenies	used in GMOD
TreeBase	http://www.treebase.org	character data, trees, meta-info on analyses	in use