GenePaint Gene Annotation with ImAnno
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==Eye== | ==Eye== | ||
- | The tissue types which | + | The tissue types which have been annotated are : |
- | + | # Neural Retina Inner neuroblastic layer | |
- | + | # Neural Retina Outer neuroblastic layer | |
- | + | # Lens Central cells | |
- | + | # Lens Anterior epithelium | |
- | + | # Corneal Mesothelium | |
- | + | # Corneal Epithelium | |
- | + | # Epithelia Palpebral folds | |
- | + | # Epithelia Conjunctival/perioptic epithelium | |
- | + | # Mesenchyme Eyelid | |
- | + | # Mesenchyme Scleral | |
- | + | # Mesenchyme Condensed perioptic mes. including ocular muscles | |
- | + | # Mesenchyme Loose perioptic mes. including orbital bone | |
- | + | # Mesenchyme Retrolenticular | |
- | + | # Mesenchyme Hyaloid plexi | |
- | + | # Non-ocular head tissues Surface epithelium | |
- | + | # Non-ocular head tissues Mesenchyme | |
- | + | # Non-ocular head tissues Muscles | |
- | + | # Non-ocular head tissues Bone | |
- | + | # Non-ocular head tissues Vasculatur | |
+ | # Other body regions Central nervous system | ||
+ | # Other body regions Other body regions | ||
+ | |||
Foreach tissue type you have to select between | Foreach tissue type you have to select between |
Revision as of 18:14, 23 January 2012
The website GenePaint provides thousands of the In Situ Hybridization images. These images correspond to the 24 sagittal sections at embryonic day 14.5.
The goal of GenePaint Gene Annotation with ImAnno is to annotate sets of genes provided by GenePaint.
Three projects were launched : eye, teeth and ear
Eye
The tissue types which have been annotated are :
- Neural Retina Inner neuroblastic layer
- Neural Retina Outer neuroblastic layer
- Lens Central cells
- Lens Anterior epithelium
- Corneal Mesothelium
- Corneal Epithelium
- Epithelia Palpebral folds
- Epithelia Conjunctival/perioptic epithelium
- Mesenchyme Eyelid
- Mesenchyme Scleral
- Mesenchyme Condensed perioptic mes. including ocular muscles
- Mesenchyme Loose perioptic mes. including orbital bone
- Mesenchyme Retrolenticular
- Mesenchyme Hyaloid plexi
- Non-ocular head tissues Surface epithelium
- Non-ocular head tissues Mesenchyme
- Non-ocular head tissues Muscles
- Non-ocular head tissues Bone
- Non-ocular head tissues Vasculatur
- Other body regions Central nervous system
- Other body regions Other body regions
Foreach tissue type you have to select between
- NA
- Negative
- Weak
- Strong
and you can add zero or more keyword
- patchy
- spotted
- regionalized
- dev nerves
Teeth
Ear
(And other tissues)