| Ontologies
| PRO/PROEVO
| http://www.bioontology.org/wiki/index.php/PRO
| protein evolutionary families,
|
| multiple endproducts of genes
| in development
|
Protein Ontology
| protein structure, function
| implementation
|
| RnaO
| http://roc.bgsu.edu/
| RNA sequence, structure, motifs, alignments
| in development
|
| GO
| implementation
|
| SO
| implementation
|
| PATO
| http://www.bioontology.org/wiki/index.php/PATO
| phenotypic and trait ontology
| implementation
|
| MAO
| http://bips.u-strasbg.fr/LBGI/MAO/mao.html
| multiple alignments of DNA,
|
| RNA and protein sequences and structures
| implementation
|
| NCBI Taxonomy
| http://www.ncbi.nlm.nih.gov/Taxonomy/
| Organismal classification, genetic code
| used widely
|
| Data formats,
| database schemas
|
| NCBI data model http://www.ncbi.nlm.nih.gov/IEB/ToolBox/SDKDOCS/DATAMODL.HTML
| sequences, alignments, annotations used at NCBI
|
