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{|
{|
|-
|-
-
!a
+
!Ontologies
-
!b
+
!PRO/PROEVO
 +
!http://www.bioontology.org/wiki/index.php/PRO
 +
!protein evolutionary families,
|-
|-
-
|c
+
multiple endproducts of genes
-
|d
+
|in development
-
|}
+
|-
 +
Protein Ontology
 +
|http://proteinontology.info/ |protein structure, function
 +
|implementation
 +
|-
 +
RnaO
 +
|http://roc.bgsu.edu/
 +
|RNA sequence, structure, motifs, alignments
 +
|in development
 +
|-
 +
GO
 +
| implementation
 +
|-
 +
SO
 +
| implementation
 +
|-
 +
PATO
 +
|http://www.bioontology.org/wiki/index.php/PATO
 +
|phenotypic and trait ontology
 +
implementation
 +
|-
 +
MAO
 +
|http://bips.u-strasbg.fr/LBGI/MAO/mao.html
 +
|multiple alignments of DNA,
 +
|-
 +
RNA and protein sequences and structures
 +
|implementation
 +
|-
 +
NCBI Taxonomy
 +
|http://www.ncbi.nlm.nih.gov/Taxonomy/
 +
|Organismal classification, genetic code
 +
|used widely
 +
|-
 +
Data formats,
 +
| database schemas
 +
|-
 +
NCBI data model http://www.ncbi.nlm.nih.gov/IEB/ToolBox/SDKDOCS/DATAMODL.HTML
 +
|sequences, alignments, annotations used at NCBI

Revision as of 14:47, 9 April 2008

multiple endproducts of genes Protein Ontology RnaO GO SO PATO MAO RNA and protein sequences and structures NCBI Taxonomy Data formats, NCBI data model http://www.ncbi.nlm.nih.gov/IEB/ToolBox/SDKDOCS/DATAMODL.HTML
Ontologies PRO/PROEVO http://www.bioontology.org/wiki/index.php/PRO protein evolutionary families,
in development
protein structure, function implementation
http://roc.bgsu.edu/ RNA sequence, structure, motifs, alignments in development
implementation
implementation
http://www.bioontology.org/wiki/index.php/PATO phenotypic and trait ontology

implementation

http://bips.u-strasbg.fr/LBGI/MAO/mao.html multiple alignments of DNA,
implementation
http://www.ncbi.nlm.nih.gov/Taxonomy/ Organismal classification, genetic code used widely
database schemas
sequences, alignments, annotations used at NCBI
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