faa_ref6 - reference 1

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Multiple alignment of complete sequences
Name                FAA
Number of sequences 37


Key

alpha helix         RED
beta strand         GREEN
core blocks         UNDERSCORE
repeat              **********


                 ********************************************************************************************************************************************************************************************************************************************************************************************************************
faaa_mouse  121  igDYTDFYSSRQHATnvgimfrgken...................allpnwlHLPVGYHGRASSIVVSGTPIRRPMGQmrpdnskpp..........vygacrlLDMELEMAFFVg.pgnrfgepipisk.AHEHIFGMVLMNDWSARDiqqwe..yvplgpFLGKSf..gttisPWVVpmdalmpfvvpn..pkqdpkplpylchsqpy...tfdinLSVSLKGEGmsqaaticrsnfkhMYWTMLQQLTHHSvngcnlrpGDLLASGTISGsd.............pesfGSMLELSWKGtkaidv   375  
q00770      128  igDYTDFYAGLNHAYnvgvlfrgpdn...................alqpnykHLPVAYHGRASSVVTSGTPLHRPQGQiltnpaanp.......klptfspckkLDIELELAFFVs.tpndlghpvhidk.AEDHIFGVVLMNDWSARDiqawe..yvplgpFNAKNf..gttitPWVVlidalepfrtvglepgnresllpylrekrad..taydipLEVEVTNAGgep.tvisrsnaknLLYSFPQMLAHHTitgcnlntGDLLGSGTISGke.............nqteGSFLEQT.NGknpikl   386  
o65374      142  igDYTDFFASMHHAKncglmfrgpen...................ainpnwfRLPIAYHGRASSIVISGTDIIRPRGQghpqgnsep..........yfgpskkLDFELEMAAVVg.pgnelgkpidvnn.AADHIFGLLLMNDWSARDiqawe..yvplgpFLGKSf..gttisPWIVtldalepfgcqa..pkqdppplpylaekesv...nydisLE.............................LAHHTvngcnlrpGDLLGTGTISGpe.............pdsyGCLLELTWNGqkplsl   367  
FAAA_HUMAN  121  igDYTDFYSSRQHATnvgimfrdken...................almpnwlHLPVGYHGRASSVVVSGTPIRRPMGQmkpddskpp..........vygacklLDMELEMAFFVg.pgnrlgepipisk.AHEHIFGMVLMNDWSARDiqkwe..yvplgpFLGKSf..gttvsPWVVpmdalmpfavpn..pkqdprplpylchdepy...tfdinLSVNLKGEGmsqaaticksnfkyMYWTMLQQLTHHSvngcnlrpGDLLASGTISGpe.............penfGSMLELSWKGtkpidl   375  
faaa_rat    121  igDYTDFYSSLQHATnvgimfrgken...................allpnwlHLPVGYHGRASSVVVSGTPIRRPMGQmrpdnskpp..........vygaskrLDMELEMAFFVg.pgnrfgepipisk.AQEHIFGMVLMNDWSARDiqqwe..yvplgpFLGKSf..gttisPWVVpmdalmpfvvpn..pkqdpkplpylchsqpy...tfdinLSVALKGEGmsqaaticrsnfkhMYWTILQQLTHHSvngcnlrpGDLLASGTISGsd.............pesfGSMLELSWKGtkaidv   375  
Q94272      122  igDYTDFYSSIHHATnvgimfrgken...................almpnwkWLPVGYHGRASSIVVSGTDLKRPVGQtkapdaevp..........sfgpsklMDFELEMAFFVggpenelgtrvpiek.AEDRIFGVVLMNDWSARDiqawe..yvplgpFLAKSf..attvsPWVVsiealrpyfven..pvqdpvppaylhhddpf...tldinLAVSIRPEGdavdhivcktnfkhLYWTLKQQLAHHTvngcnlraGDLLGSGTVSGpe.............egayGSMLELSWRGakevpv   377  
Q9XAS2      118  vaDYVDFYASENHARnvgqifrpdaad..................sltpnwkHLPIGYHGRSGTVVVSGTDVVRPSGQrkapadaap..........vfgpsvrLDIEAEVGFVVgvps.elgspvalgd.FREHVFGLCLLNDWSARDvqawe..yvplgpFLGKSf..ttsvsAWITpldaleearvap..perthellpylddtdtdqdapggydLRISVAVNGh....vvseppfstMYWTAAQQLAHMTvngaslrtGDLYGSGTVSGpt.............ererGSLLELTWNGrdplel   372  
O30145      104  pkLMVDFSTFEEHVR.mgfeklgm.....................sipqewyQVPVGYKMNPYSVIGPEEPVIWPSFT........................qiLDYELEFGIVVg....krgknvsked.AMDYVLGYTIVNDISARDmefielkamplgpLKSKDfdnatpmgPCIVtkdeik.............................dphnLKMVARVNGe....vwseastkdMHWKIPDLIAHLSkdqt.ihpGTVMLSGTPGGgc.......gmhvgkllkpGDVVELEIEGigvlrn   319  
Q9X4X0       87  ppQMRDCSCFELHLRqafaaarraralrtedpeatlkamntradervietfnRQPIYYKCNRFAVIGADDEFLWPAFS........................kaLDFELEFGCYIg....kkgkdisrdn.ARDHIVGFTIFNDMSARDaqaaem.pgmlgpAKSKDfdtanimgPCLVtadelg.............................dpydLNMVARVNGe....ewgrgntrdMRWRFEDVIAHISrset.lypGEFLGSGTVGNgc.......gleqlrylkpGDRVELEVDGiaccap   323  
O86346       71  ppSIRDSLCFLDHMRncqeamgggr....................vlmdtwyRIPAFYFACPSTVLGPYDDAPTAPGS........................awQDFELEIAAVIg....tsgkdltveq.AERSIIGYTIFNDWSARDlqmle.gqlrigqAKGKDs..gitlgPYLVtpdelepycrg........................gklsLRVIALVNGt....vigsgstaqMDWSFGEVIAYASrgvt.ltpGDVFGSGTVPTctlvehlrppesfpgwlhdGDVVTLQVEGlgetrq   297  
o86527       59  skVVAFGRNYAEHARelgn..............................evpDAPFAFFKPSTSVIGPGDAVQYPSFT........................eeLHHEAELAVVIg....rmcrevprer.VQDVIFGYTCANDITARDvq.....rrekqwARAKGfdsscplgPWVEtdldla.............................aagdLTVQLTVNGa....qrqlgrtseMIHSIEDLIVNISeamt.llpGDVILTGTPAGvg.............plnvGDEVAVTIEGigtltn   255  
o07877        1  ................mgfkvdr.............................EAPFYFNKAASTFVASGSTIPYPPGT........................snYHYEMELVVAIg....kqafqiseae.AGSIIYGFACGLDMTRRDlqlva.rekgrpwDLGKDfeqsavvaPITKaaqf...............................aienQRISLSVNGe....ikqdqvladLVWSVPELIADLSrfyh.lapGDLIFTGTPAGvg.............pvvaGDTLEGTIDGltpvql   184  
o86042        1  ................mgrpvdk...........................svEQAFYFTKSPQTLVESGATVAYPPRT........................snYHYEMELVLAIg....kpgfrvsedq.AHELIYGYAAGLDMTRRDlqlva.rdkgrpwDTGKDieegsvcsEIVPmqgv...............................vveqGAIALEVNGq....tkqssnvdkLIWNVREIIADLStyyh.lqpGDLIYTGTPEGvg.............avvaGDKIIGRVEGiaeisl   186  
o86922       24  rrIFCVGRNYAEHARemgrdpdr.............................EPPFFFTKWAETIVPSDVEVAYPSAT........................anFHYEAELVVAIg....legrdipvet.ALDHVFGYATGLDMTRRDlqlka.raegrpwDTGKNveqssplgLLHPvaecg..............................hlstGAISLTVNGe....vkqsadladLIWPVADIIAFLSglyr.llpGDLIYTGTPAGvg.............pvvpGDEIDVRIDGltptri   224  
yo23_caeel   12  tkIVCVGRNYKDHALelgn..............................aipKKPMLFVKTVNSFIVEGEPIVAPPGC........................qnLHQEVELGVVIs....kkasrisksd.AMDYIGGYTVALDMTARDfqdea.kkagapwFLAKSfdgscpigGFLPvsdip..............................nphdVELFCKINGk....dqqrcrtdvMIFDIPTLLEYTTqfft.levGDVVLTGTPAGvt.............kinsGDVIEFGLTDklnskf   211  
O23443       14  tkIVCVGRNYAAHAKelgn..............................avpKEPVIFLKPTSSYLENGGTIEIPHPL........................dsLHHEVELALVIg....qkardvpesi.AMDYIGGYAVALDMTARElqasa.kasglpwTVAKGqdtftpisSVLPkamvr..............................dpdnLELWLKVDGe....trqkgltkdMIFKVPYLISYISsimt.ly.GDVILTGTPEGvg.............pvkiGQKITAGITGlsevqf   212  
p76004       17  skVVCVGSNYAKHIKemgs..............................avpEEPVLFIKPETALCDLRQPLAIPSDF........................gsVHHEVELAVLIg....atlrqateeh.VRKAIAGYGVALDLTLRDvqgkm.kkagqpwEKAKAfdnscplsGFIPaaeftg.............................dpqnTTLSLSVNGe....qrqqgttadMIHKIVPLIAYMSkfft.lkaGDVVLTGTPDGvg.............plqsGDELTVTFDGhslttr   217  
ynq8_yeast   10  rkIICIGRNYAAHIKelnn..............................stpKQPFFFLKPTSSIVTPLSSSLVKTTRpanstfnglnedgtnpgpifiprgvkVHHEIELALIVskhl.snvtkmkpee.VYDSISGVALALDLTARNvqdea.kkkglpwTISKGfdtfmpisAIVSrekfssyksn.........................lqdiFRVKCSVNGq....lrqdggtnlMLHPLHKILQHIStmis.lepGDIILTGTPAGvg.............elkpGDRVHCELLQnndniv   241  
o58377       21  tkIVALAKNYAEHARemgs..............................eppEEPIIFLKPPSALIGPGSSIILPRRS........................krVDHEVELAVIMg....kraknvpask.AFDYILGYTIILDITARDlqaea.rkkgypwTISKGfdtfapigPRVVdsrel..............................dpsdLEIGLKVNGk....irqlgrtsqMIFKIPELIEYIShimt.lepGDIIATGTPPGvg.............plrhGDRIEAWIEGigkmef   220  
Q9UYW0       16  tkIIALAKNYAEHARemgs..............................eppEEPVIFLKPPSALIGPNSVIVLPRRS........................krVDHEVELAVIIg....kraknvpaek.AFDYILGYTILLDITARDlqaea.rkkgypwTVSKGfdtfapigPRIVdkrel..............................dpsdLEIGLKVNGk....vrqlgrtseMIFKIPELIEYISsimt.lepGDIIATGTPPGvg.............plrhGDKIEAWVEGigvlee   215  
q9yg48       84  vsAWGVGRSYAEHARemg................................msKQIAFFSKPVTSLTGHLNPVVVPPVS........................ekPDYEGEIVIIIg....kriknastae.AGKAIAGYTAGADITDRLlqd......mmswSMAKGldtygpvgPVATiidspd.............................dldgLCVHTWLNGe....kvqrgctgdMIVSIPDMVSRLSalat.lrpGDIVFTGTPPGvg......harkpprylrhGDELEVRVSGlpplrn   284  
o06724       92  knIICIGKNYRDHAIemgsea............................dipEHPMVFTKSPVTVTGHGDIVKSHEEV.......................tsqLDYEGELAVVIg....ksgtrisked.AYDHVFGYTIVNDITARDlq.....krhkqfFIGKSldttcpmgPVLVhkssiq.............................eperLKVETRVNGe....lrqsgsasdMIFSIPELIETLSkgmt.leaGDIIATGTPSGvg......kgftppkflrsGDKIDITIDPigtlsn   298  
O53242       35  skVVCVGKNYADHIAemgg..............................rppADPVIFLKPNTAIIGPNTPIRLPANA........................spVHFEGELAIVIg....rackdvpaaq.AVDNILGYTIGNDVSARDqq.....qsdgqwTRAKGhdtfcpvgPWIVtdlapf.............................dpadLELRTVVNGd....vkqhartslMIHDIGAIVEWISaimt.llpGDLILTGTPAGvg.............piedGDTVSITIEGigtltn   231  
o33119       35  skVVCIGKNYADHIVemggqtg...........................lasADPVIFLKPNTAIIGPNVPIRLPANA........................spVHFEGELALVVg....rsckdvpavq.AVDCILGYTIGNDMSARDqq.....radgqwTRAKGhdtfcpvgPWIVtdlgpl.............................dpadLELRTAVNGe....vkqhsrtslMIHGIGAIMEWISavmt.llpGDLILTGTPAGvg.............pvedGDIVSITVEGigtltn   234  
q59050       38  tkIICVGLNYIDHAKelnm..............................eipEYPIIFLKPTSAIIYNEDYIIRPRIS........................krVDYEVELAIVIg....kkcknikkde.ANDYIMGYTILNDVTARDlq.....qkdgqwTRAKSfdtfcpigPRIVkdi................................dpmnLNIECRVNGe....ikqksntknMIFDVYELVEFVAsimt.lypGDIISTGTPPGvg.............elkaGDVVECEIEGigilrn   231  
o28058       44  skIIAVGLNYIDHAEelnm..............................pvpEEPILFMKPSTAVIGHDDCIILPQIS........................qrVDYEGELAVVIa....edcrnvpetn.AADYILGYTCFNDVTARDlq.....akdgqwTRAKSfdtfaplgPYIAeid................................dpskLGIQTRVNGk....vvqksntsnLIFDVFQLVSFVSsvmt.lkaGDVIATGTPAGvg.............mlkdGDVVEVEIEKigilrn   237  
o27551       58  skVVCVGLNYRDHAAelgm..............................dipDEPIIFLKPPTTVIGSGDTVIYPEMS........................seVDYEVELAAVVs....erarrvdssa.ASEFIAGYTVLNDVTARDlq.....rrdgqwTRAKSfdtfcpigPVIEtdv................................tpdnLDISLKLNGe....vrqssntsnMIFTVHELLEFIShvmt.lepGDVIATGTPPGvg.............qmvpGDTVRATVEGvgtlvn   251  
p73637       58  skIVAVGRNYRAHAAelgn..............................dvpAEPLLFFKPPSAIAADQEEIVYPSQS........................qrVDYEGELAVIIg....kqvkditeee.AASAIWGYTIANDITARDlq.....rqdsqwTRAKGfdgfcplgPWVVrhi................................dp.eAHLETTVNDe..etprqataisdMVFTPPVLVSYISrvmt.lypGDVILTGTPEGis.............alqvGDKVEVEIEGignltn   252  
q9y3b0      106  dkVVCVGMNYVDHCKeqnv..............................pvpKEPIIFSKFASSIVGPYDEVVLPPQS........................qeVDWEVELAVVIg....kkgkhikatd.AMAHVGGFTVAHDVSARDwqmr...rngkqwLLGKTfdtfcplgPALVtkdsva.............................dphnLKICCRVNGe....vvqsgntnqMVFKTEDLIAWVSqfvt.fypGDVILTGTPPGvg......vfrkppvflkkGDEVQCEIEElgviin   311  
o07875        3  rqVFAVGLNYRDHALgeaglk............................elpTSPLIFTKFPTCIAGPYDDLPLPVGN..........................VDWEIELVAVIg....trasrvsved.ALDHVAGYAVGQDFSERLmqlsgg...mpqfSLGKSfpgfgpfgPWLVtldald.............................etngLAVECTVNGv....kvqgsdtsqLIFPVNDLVSRLShvct.llpGDVIFTGTPAGvg......narnpkwflkpGDEVVSTIAQigsikq   208  
o69352       71  gqIFAVGVNYRDHVEesgl..............................slpEAPFVFTKFPGSITGPYNNIELPDGS..........................VDFEVELVAVIg....raarhvdasn.GWDYVAGVTLGQDLSERQlqlsgp..apqqfSLGKSyagfapigPVLVtpdefa.............................dpddIGVSTRLSGd....emqnsrtrhLIFPIPELVAYLSsilp.lspGDLIFTGTPEGig......wtrepkrlistDDELVSTADVigemrh   275  
o68122       71  gkLIAIGLNYADHAEeagl..............................tvpPEPVVFMKATSAICGPDDDVEAPRGS........................ekLDWEVELAFVIg....trakyvtled.AMDHVAGYMICNDVSERSfqiers....gqwVKGKShdtfaplgPWLVtkdeik.............................dpqaLDLWLNVNGv....rrqtgttatMVYGVAFLVHYLSqfmt.lepGDIITTGTPPGvg......mgsrppkflhaGDVIELGITGlgsqrq   275  
Q9RJW4       73  gaVVCIGQNYAAHAAesgs..............................eppTRPVIFFKPPNTVVGPNDEVEIPRGS........................arTDWEVELAVVIg....rtaryldspgqALEHVAGYAVSNDVSERDfqlehs...ggqwSKGKScatfnplgPFLVpadevp.............................dvqaLRLRSFVNGe....prqdsrtadMIFSVAQLVYDLSqylv.ldpGDVINTGTPEGva......lsgrfp.ylrpGDVMEIEIEGlgrqrq   278  
q9x4x5       68  arVFGVGLNYLSHLQhlgs..............................tapEHPLGYIKPESALVGASDDIQYPALT........................aqLDYEVELVAVI.......aralgdepcASACLLGYTCGNDISARDagkrig...rldlLTQKAmdrttpvgPWVVtldeigv............................gqphLDIELSVNDe....crqfdntrqMLFPIDELLNYVDarit.lqpGDLVFTGSTHGvg.......ledgr.flqpGDRVEVRIEGigsmsn   270  
Q9RYT2       45  gkVIALALNYADHVAelgf..............................kapEEPVMFLKPNTSLLPHQGTVIYPRGA........................kfMHYEVELGIVIg....rdarrvkakd.ADDYVGGYTIANDLVVRDyvs....nyyrppMRAKGwdtfgplgPYLVsadevp.............................dpynLGLRAYVNGe....lrqegstrdMILKAPELIEFMSrfmt.leaGDVILTGTPKGvs.............hvhpGDVMRLEIDGlgalen   242  
Q46978_1      3  gtIFAVALNHRSQLDawqeafqqspyk......................appKTAVWFIKPRNTVIGCGEPIPFPQGE.........................kVLSGATVALIVg....ktatkvreed.AAEYIAGYALANDVSLPEe......sfyrpaIKAKCrdgfcpigETVAls.................................nvdnLTIYTEINGr....padhwntadLQRNAAQLLSALSefat.lnpGDAILLGTPQArv.............eiqpGDRVRVLAEGfpplen   201  
Q46978_2    223  gtLFALGLNYADHASelef..............................kppEEPLVFLKAPNTLTGDNQTSVRPNNI........................eyMHYEAELVVVIg....kqarnvsead.AMDYVAGYTVCNDYAIRDyle....nyyrpnLRVKSrdgltpmlSTIVpkeaip.............................dphnLTLRTFVNGe....lrqqgttadLIFSVPFLIAYLSefmt.lnpGDMIATGTPKGls.............dvvpGDEVVVEVEGvgrlvn   420  
Q9RPU5_1      3  gtVFAVALNHRSQLDawqeafsqppyn......................appKTAVWFIKPRNTVIRHGEPILYPQGE.........................kVLSGATVALIVg....ktasrkrsea.AAEYIAGYALANEVSLPEe......sfyrpaIKAKCrdgfcplgEMAPls.................................dvdnLTIITEINGr....eadhwntadLQRSAAQLLSALSefat.lnpGDAILLGTPQNrv.............alrpGDRVRILAKGlpalen   201  
Q9RPU5_2    223  gtLFALGLNYADHASelaf..............................tppKEPLVFIKAPNTFTEHHQTSVRPNNV........................eyMHYEAELVVVIg....ktarkvseae.AMEYVAGYTVCNDYAIRDyle....nyyrpnLRVKSrdgltpigPWIVdkeavs.............................dphnLTLRTFVNGe....lrqegttadLIFSIPFLISYLSefmt.lqpGDMIATGTPKGls.............dvvpGDEVVLEIKGvgrlvn   420  

Key

alpha helix         RED
beta strand         GREEN
core blocks         UNDERSCORE
repeat              **********
Multiple alignment of the complete sequences
You can also look at the alignment in RSF format, or MSF format
You can also get the unaligned sequences in FASTA format
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