ion_ref6 - reference 6
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Multiple alignment of complete sequences
Multiple alignment of repeats only
Number of sequences              49
Key:
| A | ION_TM repeat - type A | 
| B | ION_TM repeat - type B | 
| U | ION_TM repeat - type unknown | 
Sequence Name  |    # Repeats  | 
 |  |  |  211    |    491  |  | 
CIK1_DROME  |       1     | 
  | 
A | 
  | 
 |  |  |  199    |    479  |  | 
CIK2_DROME  |       1     | 
  | 
A | 
  | 
 |  |  |  211    |    491  |  | 
CIK4_DROME  |       1     | 
  | 
A | 
  | 
 |  |  |  180    |    448  |  | 
Q16968  |       1     | 
  | 
A | 
  | 
 |  |  |  158    |    471  |  | 
CIK6_HUMAN  |       1     | 
  | 
A | 
  | 
 |  |  |  147    |    423  |  | 
CIK2_HUMAN  |       1     | 
  | 
A | 
  | 
 |  |  |  147    |    423  |  | 
CIK2_XENLA  |       1     | 
  | 
A | 
  | 
 |  |  |  291    |    573  |  | 
CIK4_HUMAN  |       1     | 
  | 
A | 
  | 
 |  |  |  234    |    529  |  | 
CIK5_HUMAN  |       1     | 
  | 
A | 
  | 
 |  |  |  166    |    441  |  | 
CIK3_HUMAN  |       1     | 
  | 
A | 
  | 
 |  |  |  151    |    421  |  | 
CIK1_HUMAN  |       1     | 
  | 
A | 
  | 
 |  |  |  177    |    430  |  | 
CIKB_HUMAN  |       1     | 
  | 
A | 
  | 
 |  |  |  177    |    430  |  | 
CIKB_CANFA  |       1     | 
  | 
A | 
  | 
 |  |  |  169    |    422  |  | 
CIKA_HUMAN  |       1     | 
  | 
A | 
  | 
 |  |  |  419    |    672  |  | 
CIKB_DROME  |       1     | 
  | 
A | 
  | 
 |  |  |  158    |    426  |  | 
CIKW_DROME  |       1     | 
  | 
A | 
  | 
 |  |  |  174    |    449  |  | 
CIKD_HUMAN  |       1     | 
  | 
A | 
  | 
 |  |  |  213    |    486  |  | 
CIKE_RAT  |       1     | 
  | 
A | 
  | 
 |  |  |  210    |    485  |  | 
CIKG_HUMAN  |       1     | 
  | 
A | 
  | 
 |  |  |  169    |    419  |  | 
CIKL_DROME  |       1     | 
  | 
A | 
  | 
 |  |  |  53     |    304  |  | 
 406    |    671  |  | 
Q9ZT83  |       2     | 
  | 
U | 
  | 
U | 
  | 
 |  |  |  330    |    723  |  | 
 754    |   1009  |  | 
 1194   |   1481  |  | 
 1510   |   1769  |  | 
CCH1_YEAST  |       4     | 
  | 
U | 
  | 
U | 
  | 
U | 
  | 
U | 
  | 
 |  |  |  72     |    338  |  | 
P92960  |       1     | 
  | 
B | 
  | 
 |  |  |  64     |    326  |  | 
Q9SUU2  |       1     | 
  | 
B | 
  | 
 |  |  |  43     |    302  |  | 
Q38998  |       1     | 
  | 
B | 
  | 
 |  |  |  61     |    326  |  | 
Q38898  |       1     | 
  | 
B | 
  | 
 |  |  |  41     |    307  |  | 
O24538  |       1     | 
  | 
B | 
  | 
 |  |  |  55     |    321  |  | 
Q9SM12  |       1     | 
  | 
B | 
  | 
 |  |  |  63     |    329  |  | 
Q9XH40  |       1     | 
  | 
B | 
  | 
 |  |  |  393    |    676  |  | 
O54852  |       1     | 
  | 
B | 
  | 
 |  |  |  242    |    525  |  | 
O54853  |       1     | 
  | 
B | 
  | 
 |  |  |  378    |    658  |  | 
O19119  |       1     | 
  | 
B | 
  | 
 |  |  |  207    |    483  |  | 
O88877  |       1     | 
  | 
B | 
  | 
 |  |  |  212    |    488  |  | 
Q9UQ05  |       1     | 
  | 
B | 
  | 
 |  |  |  210    |    514  |  | 
Q9UQ06  |       1     | 
  | 
B | 
  | 
 |  |  |  210    |    517  |  | 
O89047  |       1     | 
  | 
B | 
  | 
 |  |  |  222    |    502  |  | 
CIKE_DROME  |       1     | 
  | 
B | 
  | 
 |  |  |  181    |    469  |  | 
O44164  |       1     | 
  | 
B | 
  | 
 |  |  |  203    |    512  |  | 
O95259  |       1     | 
  | 
B | 
  | 
 |  |  |  124    |    378  |  | 
CNG_ICTPU  |       1     | 
  | 
B | 
  | 
 |  |  |  147    |    406  |  | 
CNG1_HUMAN  |       1     | 
  | 
B | 
  | 
 |  |  |  128    |    387  |  | 
CNG2_MOUSE  |       1     | 
  | 
B | 
  | 
 |  |  |  173    |    432  |  | 
CNG3_BOVIN  |       1     | 
  | 
B | 
  | 
 |  |  |  93     |    360  |  | 
CNG_DROME  |       1     | 
  | 
B | 
  | 
 |  |  |  20     |    279  |  | 
CNGX_RAT  |       1     | 
  | 
B | 
  | 
 |  |  |  66     |    408  |  | 
Q9XFS1  |       1     | 
  | 
B | 
  | 
 |  |  |  64     |    407  |  | 
CAB45784  |       1     | 
  | 
B | 
  | 
 |  |  |  78     |    417  |  | 
O65717  |       1     | 
  | 
B | 
  | 
 |  |  |  64     |    404  |  | 
O65816  |       1     | 
  | 
B | 
  | 
Key:
| A | ION_TM repeat - type A | 
| B | ION_TM repeat - type B | 
| U | ION_TM repeat - type unknown | 
Multiple alignment of complete sequences
Multiple alignment of repeats only
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