kringle_ref6 - reference 6


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Multiple alignment of complete sequences
Multiple alignment of repeats only
Number of sequences              35

Key:

AKringle repeat - type A
BKringle repeat - type B
CKringle repeat - type C
DKringle repeat - type D
EKringle repeat - type E
FKringle repeat - type F
GKringle repeat - type G
UKringle repeat - type unknown

Sequence Name
   # Repeats
69   
  151
UROK_HUMAN
      1   
U
102  
  181
184  
  262
274  
  352
376  
  454
480  
  560
PLMN_HUMAN
      5   
A A A A B
27   
  105
141  
  219
255  
  333
369  
  447
483  
  561
597  
  675
711  
  789
825  
  903
939  
 1017
1053 
 1131
1167 
 1245
1281 
 1359
1395 
 1473
1509 
 1587
1623 
 1701
1737 
 1815
1851 
 1929
1965 
 2043
2079 
 2157
2193 
 2271
2307 
 2385
2421 
 2499
2535 
 2613
2649 
 2727
2763 
 2841
2877 
 2955
2991 
 3069
3105 
 3183
3219 
 3297
3333 
 3411
3447 
 3525
3561 
 3639
3675 
 3753
3781 
 3859
3895 
 3973
4009 
 4087
4123 
 4201
4227 
 4307
APOA_HUMAN
     38   
A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A B
1    
   13
49   
  127
163  
  241
277  
  355
391  
  469
505  
  583
619  
  697
725  
  803
839  
  917
953  
 1031
1067 
 1145
APOA_MACMU-F
     11   
A A A A A A A A A A A
1    
   65
101  
  179
O46506-F
      2   
A A
1    
   65
80   
  158
173  
  251
266  
  344
359  
  437
452  
  530
545  
  623
638  
  716
731  
  809
824  
  902
917  
  995
1010 
 1088
1103 
 1181
1196 
 1274
1289 
 1367
1382 
 1460
1475 
 1553
1568 
 1646
1661 
 1739
1754 
 1832
1847 
 1925
1940 
 2018
2032 
 2110
2125 
 2203
2218 
 2296
2311 
 2389
2404 
 2482
2497 
 2575
2590 
 2668
2683 
 2761
2776 
 2854
Q28398
     31   
A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
109  
  188
191  
  269
281  
  359
383  
  461
484  
  564
PLMN_BOVIN
      5   
A A A A B
102  
  181
184  
  262
274  
  352
378  
  456
481  
  561
PLMN_ERIEU
      5   
A A A A B
102  
  181
184  
  262
274  
  352
376  
  454
480  
  560
PLMN_MACMU
      5   
A A A A B
102  
  181
184  
  262
274  
  352
376  
  454
480  
  560
PLMN_MOUSE
      5   
A A A A B
83   
  162
165  
  243
255  
  333
357  
  435
460  
  540
PLMN_PIG
      5   
A A A A B
102  
  181
184  
  262
274  
  352
370  
  448
475  
  555
O18783
      5   
A A A A B
102  
  181
184  
  262
274  
  352
375  
  454
480  
  560
Q9R0W3
      5   
A A A A B
127  
  206
210  
  288
304  
  383
390  
  469
HGF_HUMAN
      4   
C A A D
128  
  207
211  
  289
305  
  384
391  
  470
HGF_MOUSE
      4   
C A A D
128  
  207
211  
  289
305  
  384
391  
  470
HGF_RAT
      4   
C A A D
123  
  202
206  
  284
300  
  379
386  
  467
Q90978
      4   
C A A D
114  
  193
197  
  275
288  
  367
374  
  453
Q91402-F
      4   
C A A D
117  
  194
198  
  276
289  
  368
376  
  454
Q91691
      4   
E A A A
109  
  186
190  
  268
282  
  361
369  
  448
HGFL_HUMAN
      4   
F A A A
109  
  186
190  
  268
291  
  370
378  
  457
HGFL_MOUSE
      4   
F A A A
107  
  184
188  
  266
278  
  357
365  
  444
Q90865
      4   
U A A A
1    
   21
29   
  108
Q9PU78-F
      2   
A A
109  
  186
190  
  268
291  
  370
378  
  457
P70521
      4   
F A A A
118  
  195
199  
  277
290  
  369
377  
  455
P70006
      4   
E A A A
84   
  161
165  
  243
257  
  336
344  
  423
Q13208
      4   
F A A A
109  
  186
190  
  268
282  
  361
369  
  448
Q14870
      4   
F A A A
216  
  295
FA12_HUMAN
      1   
U
236  
  310
Q24488
      1   
U
193  
  276
Q14520
      1   
U
126  
  208
214  
  296
UROT_HUMAN
      2   
G U
127  
  209
URT1_DESRO
      1   
G
84   
  157
O08762
      1   
U
463  
  542
Q07153
      1   
A
107  
  186
212  
  291
THRB_HUMAN
      2   
U U



Key:

AKringle repeat - type A
BKringle repeat - type B
CKringle repeat - type C
DKringle repeat - type D
EKringle repeat - type E
FKringle repeat - type F
GKringle repeat - type G
UKringle repeat - type unknown


Multiple alignment of complete sequences
Multiple alignment of repeats only

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