dead_ref6 - reference 1

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Multiple alignment of complete sequences
Name                DEAD
Number of sequences 7


Key

alpha helix         RED
beta strand         GREEN
core blocks         UNDERSCORE
repeat              **********


                   *************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************
BRR2_YEAST_1  477  .lkeitslpdwcqeafpssettslnpiQSKVFHAAFEGDSNMLICAPTGSGKTNIALLTVLkalshhynpktk.......klnlsafKIVYIAPLKALVQEQVREFQrrlaf.lGIKVAELTg.dsrlsrKQIDETQVLVSTPEKWDITTrns.nnlaIVELVRLLIIDEIHLLhdd.rgPVLESIVARtfwaskygqeypRIIGLSATLpnyedvgrflrv.pkeglfyfdssfrpcplsqqfcgiker.nslkklkamndacyekvlesin..egnqIIVFVHSRKETSRTATWLknkfaeenithkltkndagskqil.kteaanvldpslrkliesgigthhagltrsdrsLSEDLFadgLLQVLVCTATLAWGVNLPAHTVIIKgtdvyspekgsweqlspQDVLQMLGRAGRPRY   880  
BRR2_YEAST_2 1329  istselgnd.dfsevfe...fktfnkiQSQVFESLYNSNDSVFVGSGKGTGKTAMAELALLnhwrqn..................kgRAVYINPSGEKIDFLLSDWNkrfshlaGGKIINKLgndpslnlKLLAKSHVLLATPVQFELLSrrw.rqrkNIQSLELMIYDDAHEIsqgvygAVYETLISRmifiatqlekkiRFVCLSNCLanardfgewagm.tksniynfspseriepleiniqsfkdv.ehisfnfsmlqmafeasaaaag..nrnsSSVFLPSRKDCMEVASAFmkfskaiewdmlnv....eeeqiv..pyiekltdghlraplkhgvgilykgmasnderIVKRLYeygAVSVLLISKDCSAFACKTDEVIIL.gtnlydgaehkympytiNELLEMVGLASGNDS  1715  
O48534_1      485  klvkisdlpewaqpafr..gmqqlnrvQSKVYGTALFKADNILLCAPTGAGKTNVAVLTILhqlglnmnpgg........tfnhgnyKIVYVAPMKALVAEVVDSLSqrlkd.fGVTVKELSg.dqsltgQEIKETQIIVTTPEKWDIITrks.gdrtYTQLVRLLIIDEIHLLddn.rgPVLESIVARtlrqiestkehiRLVGLSATLpncddvasflrvdlknglfifdrsyrpvplgqqyiginvk.kplrrfqlmndicyqkvvava...gkhqVLIFVHSRKETAKTARAIrdtamandtlsrflkedsqsreil.kclagllknndlkellpygfaihhagltrtdreIVENQFrwgNLQVLISTATLAWGVNLPAHTVIIKgtqvynpergewmelspLDVMQMIGRAGRPQY   886  
O48534_2     1332  lpvmalrnp.syetlyqd..fkhfnpvQTQVFTVLYNTSDNVVVAAPTGSGKTICAEFAILrnhlegpds...............amRVVYIAPLEAIAKEQFRDWEkkfgkglGLRVVELTg.etlldlKLLEKGQIIISTPEKWDALSrrw.kqrkYIQQVSLFIVDELHLIggq.ggQVLEVIVSRmryissqvgnkiRIVALSTSLanakdlgewiga.sscgvfnfppnvrpvpleihihgvdil.sfearmqamtkptytaivqhak..nkkpAIVFVPTRKHVRLTAVDLiayshmdnmkspdfll.gnleele..pfliqiceetlketlrhgigylheglsnldqeIVTQLFeagRIQVCVMSSSLCWGTPLKAHLVVVMgthfydgrenshsdypiSNLLQMMGRGSRPLL  1724  
Q9SYP1_1      484  klvkitempdwaqpafk..gmqqlnrvQSKVYDTALFKAENILLCAPTGAGKTNVAMLTILqqlemnrntdg........tynhgdyKIVYVAPMKALVAEVVGNLSnrlkd.yGVIVRELSg.dqsltgREIEETQIIVTTPEKWDIITrks.gdrtYTQLVRLLIIDEIHLLhdn.rgPVLESIVARtlrqiettkeniRLVGLSATLpnyedvalflrvdlkkglfkfdrsyrpvplhqqyigisvk.kplqrfqlmndlcyqkvlaga...gkhqVLIFVHSRKETSKTARAIrdtamandtlsrflkedsvtrdvl.hshedivknsdlkdilpygfaihhaglsrgdreIVETLFsqgHVQVLVSTATLAWGVNLPAHTVIIKgtqvynpekgawmelspLDVMQMLGRAGRPQY   885  
Q9SYP1_2     1331  lpvtalrnp.nyeilyqd..fkhfnpvQTQVFTVLYNTNDNVLVAAPTGSGKTICAEFAILrnhhegpda...............tmRVVYIAPLEAIAKEQFRIWEgkfgkglGLRVVELTg.etaldlKLLEKGQIIISTPEKWDALSrrw.kqrkYVQQVSLFIVDELHLIggq.hgPVLEVIVSRmryissqvinkiRIVALSTSLanakdlgewiga.sshglfnfppgvrpvpleihiqgvdis.sfearmqamtkptytaivqhak..nkkpAIVFVPTRKHVRLTAVDLmayshmdnpqspdfll.gkleeld..pfveqireetlketlchgigylheglssldqeIVTQLFeagRIQVCVMSSSLCWGTPLTAHLVVVMgtqyydgrenshsdypvPDLLQMMGRASRPLL  1723  
O75643_1       25  qllpveklpkyaqagfe..gfktlnriQSKLYRAALETDENLLLCAPTGAGKTNVALMCMLreigkhinmdg........tinvddfKIIYIAPMRSLVQEMVGSFGkrlat.yGITVAELTg.dhqlckEEISATQIIVCTPEKWDIITrkg.gertYTQLVRLIVLDEIHLLhdd.rgPVLEALVARairniemtqedvRLIGLSATLpnyedvatflrvdpakglfyfdnsfrpvpleqtyvgitek.kaikrfqimneivyekimeha...gknqVLVFVHSRKETGKTARAIrdmclekdtlglflregsastevl.rteaeqcknlelkdllpygfaihhagmtrvdrtLVEDLFgdkHIQVLVSTATLAWGVNLPAHTVIIKgtqvyspekgrwtelgaLDILQMLGRAGRPQY   426  
O75643_2      872  lpvsalrns.afeslyqd.kfpffnpiQTQVFNTVYNSDDNVFVGAPTGSGKTICAEFAILrmllqns.................egRCVYITPMRLWQEQVYMDWYekfqdrlNKKVVLLTg.etstdlKLLGKGNIIISTPEKWDILSrrw.kqrkNVQNINLFVVDEVHLIgge.ngPVLEVICSRmryissqierpiRIVALSSSLsnakdvahwlgc.satstfnfhpnvrpvplelhiqgfnis.htqtrllsmakpvfhaitkhs...pkkpVIVFVPSRKQTRLTAIDIlttcaadiqrqrflhc..tekdli..pyleklsdstlketllngvgylheglspmerrLVEQLFssgAIQVVVASRSLCWGMNVAAHLVIIMdtlyyngkihayvdypiYDVLQMVGHANRPLQ  1261  
Q9U2G0_1      454  klvsvselpkwaqpafd..gykslnriQSRLCDSALRSKEHLLLCAPTGAGKTNVALLTMLqeignhlaedg........svkldefKIVYIAPMKSLVQEMVGSFSkrlap.fGITVGEMTg.daqmskEQFMATQVIVCTPEKYDVVTrkg.geraYNQMVRLLIIDEIHLLhdd.rgPVLESIVVRtirqmeqnhdecRLVGLSATLpnyqdvatflrv.kpehlhffdnsyrpvpleqqyigvtek.kalkrfqamnevvydkimeha...gksqVLVFVHSRKETAKTAKAIrdaclekdtlsafmregsasteil.rteaeqaknldlkdllpygfaihhagmnrvdrtLVEDLFadrHIQVLFSTATLAWGVNLPAHTVIIKgtqiynpekgrwtelgaLDIMQMLGRAGRPQY   854  
Q9U2G0_2     1300  lpisavtnk.efqtvfaesgfkvfnpiQTQVFRTVFESNENVIVCAPNGSGKTAIAELAVLrhfentp.................eaKAVYITPMEDMATKVYADWKrrlepaiGHTIVLLTg.eqtmdlKLAQRGQLIISTPERWDNISrrw.kqrkSVQNVKLFIADDLHMIgas.ngAVFEVVCSRtryissqlesavRVVALSSSLtnardlgmwlgc.sasatfnfmpstrpvpldleiksfnls.hnasrfaamerpvyqaicrhagklepkpALVFVPVRRQTRPVAVALltmaladgapkrflrlaehddtfq..alladiedeslresvscgvgflhegtapkdvhIVQQLFesnAIQVCVVPRGMCYQIEMSAYLVVVMdtqfyngkyhvyedypiADMLHMVGLANRPIL  1695  
P53327_1      268  kllkisdldhfcktvf...pyetlnqiQSLVYPVAYKTNENMLICAPTGAGKTDIALLTIIntikqfsvvngenei....diqyddfKVIYVAPLKALAAEIVDKFSkklap.fNIQVRELTg.dmqltkAEILATQVIVTTPEKWDVVTrkangdndLVSKVKLLIIDEVHLLhed.rgPVIETLVARtlrqvessqsmiRIIGLSATLpnfmdvadflgvnrqigmfyfdqsfrpkpleqqllgcrgkagsrqskenidkvaydklsemiq..rgyqVMVFVHSRKETVKSARNFiklaesnhevdlfapd.piekdky.srslvknrdkdmkeifqfgfgihhagmarsdrnLTEKMFkdgAIKVLCCTATLAWGVNLPADCVIIKgtqvydskkggfidlgiSDVIQIFGRGGRPGF   674  
P53327_2     1121  lptsalqnp.liesiy...pfkyfnpmQTMTFYTLYNTNENAFVGSPTGSGKTIVAELAIWhafktfp.................gkKIVYIAPMKALVRERVDDWRkkitpvtGDKVVELTg.dslpdpKDVHDATIVITTPEKFDGISrnw.qtrkFVQDVSLIIMDEIHLLasd.rgPILEMIVSRmnyissqtkqpvRLLGMSTAVsnaydmagwlgv.kdhglynfpssvrpvplkmyidgfpdnlafcplmktmnkpvfmaikqhs...pdkpALIFVASRRQTRLTALDLihlcgmednprrflni.ddeeelq..yylsqvtddtlklslqfgiglhhaglvqkdrsISHQLFqknKIQILIATSTLAWGVNLPAHLVIIKgtqffdakiegyrdmdlTDILQMMGRAGRPAY  1510  
O60072_1      257  klleissmdilcrktfl..syqtlnriQSLVYPIAYKTNENMLICAPTGAGKTDVALLAMLqtisnyvesmnlmdesepldvhrddfKIVYIAPMKALAAEVVEKMGkrlaw.lGLKTRELTg.dmqltkTEIAETQILVTTPEKWDVVTrksvgdtqLAEKVRLVIIDEVHMLhde.rgAVIESLVARtqrlvetsqqmiRIVGLSATLpnyldvadflgvnrykglfyfssafrpcpieqhfigakg..spkivnsnideacfdkvlkliq..eghqVMIFVHSRKETINSAKKLreqffhegeadlldns.qhekyslaqrdvsksknkelkelfkysmgihnagmlrsdrhLTERLFsmgILKILCCTATLAWGVNLPAYAVLIKgtqlydpqkgsfvdlgvLDVLQIFGRAGRPQF   667  
O60072_2     1114  lpitalhdp.vlegicak.rfsffnavQTQFFHTIYHTDTNIFVGAPTGSGKTMAAELATWralhnyp.................ksKVVYIAPMKALVKERVKDWGhrlvepmGISMIELTg.dtnpdvKAVTNANIIITTPEKWDGITrsw.ksrkYVQDVSLIILDEIHLLgsd.rgPVLEMIVSRmnyvasqtnkkvRVLGLSTAVanandlanwlni..rdglfnfrhsvrpvpleiyidgfpgr.aycprmmsmnkpafqaikths...ptqpVLIFVSSRRQTRLTAKDLiafcglednprrflym..deeele..mivsevedkslklalpfgialhhagltendrkISEELFvnnKVQILIATSTLAWGVNTPAHLVIVKgteyydakiggykdmdlTDVLQMLGRAGRPQF  1502  

Key

alpha helix         RED
beta strand         GREEN
core blocks         UNDERSCORE
repeat              **********
Multiple alignment of the complete sequences
You can also look at the alignment in RSF format, or MSF format
You can also get the unaligned sequences in FASTA format
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