Name SH3
Number of sequences 6
Key
alpha helix RED
beta strand GREEN
core blocks UNDERSCORE
repeat **********
***********************************************************
Q24218_1 15 .................................................................................................................................................................................................magnmkhgksqddvcyVVAKYDYAAQGaQELDLRKNERYLLLDDS...kHWWRVqnsr.nQSGYVPSNYVkkekpslfdsikkkvkkgsgsktlpncspsrqvesptmsrrlppdpaeai...........................................................................................................................................................................................................................................................................................................................................................................................
Q24218_2 117 ...............................................................................................................................................................................................................gtAVVKYNYQAQQpDELSLTKGTRILILEKS..ndGWWRGqsg..nSVGWFPSNYTtedcdndgeihtyamaenvl.........................................................................................................................................................................................................................................................................................................................................................................................................................
Q24218_3 189 ...............................................................................................................................................................................................................diVVALYSFTSNNdQELSFEKGDRLEIVDRPasdpDWYKArnnq.gQVGLVPRNYLqelndylatpyrntsasagngngggsnggagggggndsmerrnegnkpaaqssgqpierpnlagkswyygaitrsqcdtvlnghghdgdflirdsetnmgdysvslkapgrnkhfrvhveqnmycigqrkfhsldqlvdhyqrapiytnkqgeklylvrslpkangt......................................................................................................................................................................................................................................................................
NCK_HUMAN_1 5 ...........................................................................................................................................................................................................maeevvVVAKFDYVAQQeQELDIKKNERLWLLDDS...kSWWRVrnsm.nKTGFVPSNYVerknsarkasivknlkdtlgigkvkrkpsvpdsaspaddsfvdpgerlydln.........................................................................................................................................................................................................................................................................................................................................................................................
NCK_HUMAN_2 109 ...............................................................................................................................................................................................................mpAYVKFNYMAEReDELSLIKGTKVIVMEKC..sdGWWRGsyn..gQVGWFPSNYVteegdsplgd...................................................................................................................................................................................................................................................................................................................................................................................................................................
NCK_HUMAN_3 171 ...............................................................................................................................................................................................................hvVQALYPFSSSNdEELNFEKGDVMDVIEKPendpEWWKCrkin.gMVGLVPKNYVtvmqnnpltsglepsppqcdyirpsltgkfagnpwyygkvtrhqaemalnerghegdflirdsesspndfsvslkaqgknkhfkvqlketvycigqrkfstmeelvehykkapiftseqgeklylvkhls...........................................................................................................................................................................................................................................................................................................
sem5_caeel_1 1 ...............................................................................................................................................................................................................meAVAEHDFQAGSpDELSFKRGNTLKVLNKD.edpHWYKAeld..gNEGFIPSNYIrmtecnwylgkitrndaevllkkptvrdghflvrqcesspgefsisvrfqdsvqhfkvlrdqngkyylwavkfnslnelvayhrtasvsrthtillsdmnvet......................................................................................................................................................................................................................................................................................................................................
sem5_caeel_2 157 ...............................................................................................................................................................................................................kfVQALFDFNPQEsGELAFKRGDVITLINKD..dpNWWEGqln..nRRGIFPSNYVcpynsnksnsnvapgfnfgn.........................................................................................................................................................................................................................................................................................................................................................................................................................
YES_HUMAN 94 ..............................................................................................................mgcikskenkspaikyrpentpep.vstsvshygaepttvspcpsssakgtavnfsslsmtpfgg.ssgvtpfggasssfsvv..pssypagltggvtiFVALYDYEARTtEDLSFKKGERFQIINNT..egDWWEArsiatgKNGYIPSNYVapa...............dsiqaee......wyfgkmgrkdaerlllnpgnqrgiflvresettkgayslsirdwdeirgd....nvkhykirkldn...ggyyittraqfdtlqklvkhytehadglchklttvcptvkpqtqgl.....akdaweipreslrlevklgqgcfgevwmgtwngttkvaiktlkpgtmmpeaflqeaqimkklrhdklvplyavvseepiyivtefmskgslldflkegdgkylklpqlvdmaaqiadgmayiermnyihrdlraanilvgenlvckiadfglarliedneytarqgakfpikwtapeaalygrftiksdvwsfgilqtelvtkgrvpypgmvnrevleqvergyrmpcpqgcpeslhelmnlcwkkdpderptfeyiqsfledyftatepqyqpgenl
LAS1_HUMAN 205 mnpncarcgkivyptekvncldkfwhkacfhcetckmtlnmknykgyekkpycnahypkqsftmvadtpenlrlkqqselqsqvrykeefeknkgkgfsvvadtpelqrikktqdqisnikyheefeksrmgpsggegmeperrdsqdgssyrrpleqqqp...hhiptsapvyqqpqqqpvaqsyggykepaapvsiqrsapggggkrYRAVYDYSAADeDEVSFQDGDTIVNVQQI..ddGWMYGtvertgDTGMLPANYVeai..........................................................................................................................................................................................................................................................................................................................................................................................................................................
grap_human_1 1 ...............................................................................................................................................................................................................meSVALYSFQATEsDELAFNKGDTLKILNME.ddqNWYKAelr..gVEGFIPKNYIrvkphpwysgrisrqlaeeilmkrnhlgafliresesspgefsvsvnygdqvqhfkvlreasgkyflweekfnslnelvdfyrtttiakkrqiflrdeepllkspga..................................................................................................................................................................................................................................................................................................................................
grap_human_2 161 ...............................................................................................................................................................................................................cfAQAQFDFSAQDpSQLSFRRGDIIEVLERP..dpHWWRGrsc..gRVGFFPRSYVqpvhl........................................................................................................................................................................................................................................................................................................................................................................................................................................
Key
alpha helix RED
beta strand GREEN
core blocks UNDERSCORE
repeat **********
Multiple alignment of repeats only
You can also look at the alignment in RSF format, or MSF format
You can also get the unaligned sequences in FASTA format
Back to Schema