kringle_2_ref6 - reference 6

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Multiple alignment of repeats only
Name                KRINGLE
Number of sequences 5


Key

alpha helix         RED
beta strand         GREEN
core blocks         UNDERSCORE
repeat              **********


                                                                                                                        *********************************************************************************                                                                                                                                                                                                                                                                   
PLMN_HUMAN_1  102  mehkevvlllllflksgqgeplddyvntqgaslfsvtkkqlgagsieecaakceedeeftcrafqyhskeqqcvimaenrkssiiirmrdvvlfekkvylsECKTGNGKNYRGTMSKTKNGITCQKWSSTSPHRP.RFSPATHPSEGLEENYCRNPDNDPQGPWCYTTDPEKRYDYCDILEC.ee................................................................................................................................................................................................................................................................
PLMN_HUMAN_2  184  .....................................................................................................ECMHCSGENYDGKISKTMSGLECQAWDSQSPHAH.GYIPSKFPNKNLKKNYCRNPDRE.LRPWCFTTDPNKRWELCDIPRC.ttpppssgpty.......................................................................................................................................................................................................................................................
PLMN_HUMAN_3  274  .....................................................................................................QCLKGTGENYRGNVAVTVSGHTCQHWSAQTPHTH.NRTPENFPCKNLDENYCRNPDGK.RAPWCHTTNSQVRWEYCKIPSC.dsspvsteqlaptappeltpvvq...........................................................................................................................................................................................................................................
PLMN_HUMAN_4  376  .....................................................................................................DCYHGDGQSYRGTSSTTTTGKKCQSWSSMTPHRH.QKTPENYPNAGLTMNYCRNPDAD.KGPWCFTTDPSVRWEYCNLKKC.sgteasvvapppvvllpdvetpsee.........................................................................................................................................................................................................................................
PLMN_HUMAN_5  480  .....................................................................................................DCMFGNGKGYRGKRATTVTGTPCQDWAAQEPHRHSIFTPETNPRAGLEKNYCRNPDGDVGGPWCYTTNPRKLYDYCDVPQC.aapsfdcgkpqvepkkcpg.......rvvggcvahphswpwqvslrtrfgmhfcggtlispewvltaahcleksprpssykvilgahqevnlephvqeievsrlfleptrkdiallklsspavitdkvipaclpspnyvvadrtecfitgwgetqgtfgagllkeaqlpvienkvcnryeflngrvqstelcaghlaggtdscqgdsggplvcfekdkyilqgvtswglgcarpnkpgvyvrvsrfvtwiegvmrnn.
PLMN_ERIEU_1  102  mqrkelvllfllflqpghgiplddyvttqgaslcsstkkqlsvgsteecavkceketsficrsfqyhskeqqcvimaenskstpvlrmrdvilfekkmylsECKVGNGKYYRGTVSKTKTGLTCQKWSAETPHKP.RFSPDENPSEGLDQNYCRNPDNDPKGPWCYTMDPEVRYEYCEIIQC.ed................................................................................................................................................................................................................................................................
PLMN_ERIEU_2  184  .....................................................................................................ECMHCSGQNYVGKISRTMSGLECQPWDSQIPHPH.GFIPSKFPSKNLKMNYCRNPDGE.PRPWCFTMDRNKRWEYCDIPRC.ttppppsgpty.......................................................................................................................................................................................................................................................
PLMN_ERIEU_3  274  .....................................................................................................QCLMGNGEHYQGNVAVTVSGLTCQRWGEQSPHRH.DRTPENYPCKNLDENYCRNPDGE.PAPWCFTTNSSVRWEFCKIPDC.vssasetehsdapvivppeqtpvvq.........................................................................................................................................................................................................................................
PLMN_ERIEU_4  378  .....................................................................................................ECYQGNGQTYRGTSSTTITGKKCQPWTSMRPHRH.SKTPENYPDADLTMNYCRNPDGD.KGPWCYTTDPSVRWEFCNLKKC.sgtemsatnsspvqvssasesseq..........................................................................................................................................................................................................................................
PLMN_ERIEU_5  481  .....................................................................................................DCIIDNGKGYRGTKATTGAGTPCQAWAAQEPHRHSIFTPETNPRADLQENYCRNPDGDANGPWCYTTNPRKLFDYCDIPHCvspssadcgkpkvepkkcpg.......r.vggcvahphswpwqvslrrfgqhfcggtlispewvvtaahclekfsnpaiykvvlgahqetrlerdvqikgvtkmflepyradiallklsspaiitdkdhpaclpnsnymvadrslcyitgwgetkgtygagllkeaqlpvienkvcnrqsflngrvrstelcaghlaggvdscqgdsggplvcfekdryilqgvtswglgcarltrpgvyvrvsryvswlqdvmrnn..
PLMN_PIG_1     83  ...................dslddyvntqgaflfslsrkqvaarsveecaakceaetnficrafqyhskdqqcvvmaensktspiarmrdvvlfekriylsECKTGNGKNYRGTTSKTKSGVICQKWSVSSPHIP.KYSPEKFPLAGLEENYCRNPDNDEKGPWCYTTDPETRFDYCDIPEC.ed................................................................................................................................................................................................................................................................
PLMN_PIG_2    165  .....................................................................................................ECMHCSGEHYEGKISKTMSGIECQSWGSQSPHAH.GYLPSKFPNKNLKMNYCRNPDGE.PRPWCFTTDPNKRWEFCDIPRC.ttppptsgpty.......................................................................................................................................................................................................................................................
PLMN_PIG_3    255  .....................................................................................................QCLKGRGENYRGTVSVTASGHTCQRWSAQSPHKH.NRTPENFPCKNLEENYCRNPDGE.TAPWCYTTDSEVRWDYCKIPSC.gssttstehldapvppeqtpvaq...........................................................................................................................................................................................................................................
PLMN_PIG_4    357  .....................................................................................................DCYRGNGESYRGTSSTTITGRKCQSWVSMTPHRH.EKTPGNFPNAGLTMNYCRNPDAD.KSPWCYTTDPRVRWEYCNLKKC.seteqqvtnfpaiaqvpsvedlse..........................................................................................................................................................................................................................................
PLMN_PIG_5    460  .....................................................................................................DCMFGNGKRYRGKRATTVAGVPCQEWAAQEPHRHSIFTPETNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCDVPQC.vtssfdcgkpkvepkkcpa.......rvvggcvsiphswpwqislryryrghfcggtlispewvltakhclekssspssykvilgaheeyhlgegvqeidvsklfkepseadiallklsspavitdkvipaclptpnyvvadrtacyitgwgetkgtygagllkearlpvienkvcnryeylggkvspnelcaghlaggidscqgdsggplvcfekdkyilqgvtswglgcalpnkpgvyvrvsrfvtwieeimrrn.
O18783_1      102  meygkviflfllflksgqgeslenyiktegaslsnsqkkqfvassteecealceketefvcrsfehynkeqkcvimsensktssverkrdvvlfekriylsDCKSGNGRNYRGTLSKTKSGITCQKWSDLSPHVP.NYAPSKYPDAGLEKNYCRNPDDDVKGPWCYTTNPDIRYEYCDVPEC.ed................................................................................................................................................................................................................................................................
O18783_2      184  .....................................................................................................ECMHCSGENYRGTISKTESGIECQPWDSQEPHSH.EYIPSKFPSKDLKENYCRNPDGE.PRPWCFTSNPEKRWEFCNIPRC.sspppppgpml.......................................................................................................................................................................................................................................................
O18783_3      274  .....................................................................................................QCLKGRGENYRGKIAVTKSGHTCQRWNKQTPHKH.NRTPENFPCRGLDENYCRNPDGE.LEPWCYTTNPDVRQEYCAIPSC.gtssphtdrveqspviq.................................................................................................................................................................................................................................................
O18783_4      370  .....................................................................................................ECYEGKGENYRGTTSTTISGKKCQAWSSMTPHQH.KKTPDNFPNADLIRNYCRNPDGD.KSPWCYTMDPTVRWEFCNLEKC.sgtgstvlnaqttrvpsvdttshpes........................................................................................................................................................................................................................................
O18783_5      475  .....................................................................................................DCMYGSGKDYRGKRSTTVTGTLCQAWTAQEPHRHTIFTPDTYPRAGLEENYCRNPDGDPNGPWCYTTNPKKLFDYCDIPQCvspssfdcgkprvepqkcpg.......rivggcyaqphswpwqislrtrf.gehfcggtliapqwvltaahclersqwpgaykvilglhrevnpesysqeigvsrlfkgplaadiallklnrpaaindkvipaclpsqdfmvpdrtlchvtgwgdtqgtsprgllkqaslpvidnrvcnrheylngrvkstelcaghlvgrgdscqgdsggplicfeddkyvlqgvtswglgcarpnkpgvyvrvsryiswiedvmknn
Q9R0W3_1      102  mdhkeiillfllflkpgqgdsldgyvstqgaslhsltkkqlaagsiadclakcegetdficrsfqyhskeqqcvimaensktssiirmrdvilfekrvylsECKTGIGKGYRGTMSKTKTGVTCQKWSDTSPHVP.KYSPSTHPSEGLEENYCRNPDNDEQGPWCYTTDPDQRYEYCNIPEC.ee................................................................................................................................................................................................................................................................
Q9R0W3_2      184  .....................................................................................................ECMYCSGEKYEGKISKTMSGLDCQSWDSQSPHAH.GYIPAKFPSKNLKMNYCRNPDGE.PRPWCFTTDPNKRWEYCDIPRC.ttpppppgpty.......................................................................................................................................................................................................................................................
Q9R0W3_3      274  .....................................................................................................QCLKGRGENYRGTVSVTASGKTCQRWSEQTPHRH.NRTPENFPCKNLEENYCRNPDGE.TAPWCYTTDSQLRWEYCEIPSC.gssvspdqsdssvlpeqtpvvq............................................................................................................................................................................................................................................
Q9R0W3_4      375  .....................................................................................................ECYQGNGKSYRGTSSTTNTGKKCQSWVSMTPHSH.SKTPANFPDAGLEMNYCRNPDNDQRGPWCFTTDPSVRWEYCNLKRC.setgggvaesaivpqvpsapgtset.........................................................................................................................................................................................................................................
Q9R0W3_5      480  .....................................................................................................DCMYGNGKEYRGKTAVTAAGTPCQEWAAQEPHSHRIFTPQTNPRAGLEKNYCRNPDGDVNGPWCYTMNPRKLYDYCNIPLCaslssfecgkpqvepkkcpg.......rvvggcvanphswpwqislrtrfsgqhfcggtlispewvltaahclekssrpefykvilgaheerilgsdvqqiavtklvlepndadiallklsrpatitdnvipaclpspnyvvadrtlcyitgwgetkgtpgagrlkeaqlpvienkvcnraeylnnrvkstelcaghlaggidscqgdsggplvcfekdkyilqgvtswglgcarpnkpgvyvrvsryvnwieremrnd

Key

alpha helix         RED
beta strand         GREEN
core blocks         UNDERSCORE
repeat              **********
Multiple alignment of repeats only
You can also look at the alignment in RSF format, or MSF format
You can also get the unaligned sequences in FASTA format
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