Name LRR
Number of sequences 6
Key
alpha helix RED
beta strand GREEN
core blocks UNDERSCORE
repeat **********
**************************
PGS1_HUMAN_1 91 mwplwrlvsllalsqalpfeqrgfwdftlddgpfmmndeeasgad.tsgvl.dpdsvtptysamcpfgchchlrvvqcsdlglksvpkeispDTTLLDLQNNDI..selrkddfkglq............................................
PGS1_HUMAN_2 115 ............................................................................................HLYALVLVNNKI..skihekafsplr............................................
PGS1_HUMAN_3 139 ............................................................................................KLQKLYISKNHL..veippn..lps.............................................
PGS1_HUMAN_4 160 ............................................................................................SLVELRIHDNRI..rkvpkgvfsglr............................................
PGS1_HUMAN_5 184 ............................................................................................NMNCIEMGGNPLensgfepgafdglk............................................
PGS1_HUMAN_6 210 .............................................................................................LNYLRISEAKL..tgipkd.lpe..............................................
PGS1_HUMAN_7 230 ............................................................................................TLNELHLDHNKI..qaieledllrys............................................
PGS1_HUMAN_8 254 ............................................................................................KLYRLGLGHNQI..rmiengslsflp............................................
PGS1_HUMAN_9 278 ............................................................................................TLRELHLDNNKL..arvpsg.lpdlk............................................
PGS1_HUMAN_10 301 ............................................................................................LLQVVYLHSNNI..tkvgvndfcpmgfgvkrayyngislfnnpvpywevqpatfrcvtdrlaiqfgnykk
PGS1_BOVIN_1 92 mwplwplaallalsqalpfeqkafwdftlddglpmlndeeasgaettsgip.dldslpptysamcpfgchchlrvvqcsdlglkavpkeispDTTLLDLQNNDI..selrkddfkglq............................................
PGS1_BOVIN_2 116 ............................................................................................HLYALVLVNNKI..skihekafsplr............................................
PGS1_BOVIN_3 140 ............................................................................................KLQKLYISKNHL..ceippn..lps.............................................
PGS1_BOVIN_4 161 ............................................................................................SLVELRIHDNRI..rkvpkgvfsglr............................................
PGS1_BOVIN_5 185 ............................................................................................NMNCIEMGGNPLensgfepgafdglk............................................
PGS1_BOVIN_6 211 .............................................................................................LNYLRISEAKL..tgipkd.lpe..............................................
PGS1_BOVIN_7 231 ............................................................................................TLNELHLDHNKI..qaieledllrys............................................
PGS1_BOVIN_8 255 ............................................................................................KLYRLGLGHNQI..rmiengslsflp............................................
PGS1_BOVIN_9 279 ............................................................................................TLRELHLDNNKL..srvpag.lpdlk............................................
PGS1_BOVIN_10 302 ............................................................................................LLQVVYLHTNNI..tkvgvndfcpvgfgvkrayyngislfnnpvpywevqpatfacvtdrlaiqfgnykk
PGS2_HUMAN_1 82 mkatiillllaqvswagpfqqrglfdfmlede........asgigpevpddrdfe...pslgpvcpfrcqchlrvvqcsdlgldkvpkdlppDTTLLDLQNNKI..teikdgdfknlk............................................
PGS2_HUMAN_2 106 ............................................................................................NLHALILVNNKI..skvspgaftplv............................................
PGS2_HUMAN_3 130 ............................................................................................KLERLYLSKNQL..kelpek..mpk.............................................
PGS2_HUMAN_4 151 ............................................................................................TLQELRAHENEI..tkvrkvtfngln............................................
PGS2_HUMAN_5 175 ............................................................................................QMIVIELGTNPLkssgiengafqgmk............................................
PGS2_HUMAN_6 201 ............................................................................................KLSYIRIADTNI..tsipqg.lpp..............................................
PGS2_HUMAN_7 222 ............................................................................................SLTELHLDGNKI..srvdaaslkgln............................................
PGS2_HUMAN_8 246 ............................................................................................NLAKLGLSFNSI..savdngslantp............................................
PGS2_HUMAN_9 270 ............................................................................................HLRELHLDNNKL..trvpgg.laehk............................................
PGS2_HUMAN_10 293 ............................................................................................YIQVVYLHNNNI..svvgssdfcppghntkkasysgvslfsnpvqyweiqpstfrcvyvrsaiqlgnyk.
PGS2_RABIT_1 83 mtatlillllaqvswagpfqqrglfdfmlede........asgigpderap.elpdl.dmlgpvcpfrcqchlrvvqcsdlgldkvpkdlppDTTLLDLQNNKI..teikdgdfknlk............................................
PGS2_RABIT_2 107 ............................................................................................NLHALILVNNKI..skispgaftplv............................................
PGS2_RABIT_3 131 ............................................................................................KLERLYLSKNHL..kelpek..mpk.............................................
PGS2_RABIT_4 152 ............................................................................................SLQELRAHENEI..tkvrksvfsgmn............................................
PGS2_RABIT_5 176 ............................................................................................QMIVIELGTNPLkssgiengafqgmk............................................
PGS2_RABIT_6 202 ............................................................................................KLSYIRIADTNI..ttipqg.lpp..............................................
PGS2_RABIT_7 223 ............................................................................................SLTELHLDGNKI..tkidasslkgln............................................
PGS2_RABIT_8 247 ............................................................................................NLAKLGLSFNDI..savdngslanap............................................
PGS2_RABIT_9 271 ............................................................................................HLRELHLDNNKL..irvpgg.ladhk............................................
PGS2_RABIT_10 294 ............................................................................................YIQVVYLHNNNI..svvgandfcppgyntkkasysgvslfsnpvqyweiqpstfrcvymrsaiqlgnyk.
PGS2_MOUSE_1 77 mkatliffllaqvswagpfeqrglfdfmlede........asgiip......ydpdn.pli.smcpyrcqchlrvvqcsdlgldkvpwdfppDTTLLDLQNNKI..teikegafknlk............................................
PGS2_MOUSE_2 101 ............................................................................................DLHTLILVNNKI..skispeafkplv............................................
PGS2_MOUSE_3 125 ............................................................................................KLERLYLSKNQL..kelpek..mpr.............................................
PGS2_MOUSE_4 146 ............................................................................................TLQELRVHENEI..tklrksdfngln............................................
PGS2_MOUSE_5 170 ............................................................................................NVLVIELGGNPLknsgiengafqglk............................................
PGS2_MOUSE_6 196 ............................................................................................SLSYIRISDTNI..taipqg.lpt..............................................
PGS2_MOUSE_7 217 ............................................................................................SLTEVHLDGNKI..tkvdapslkgli............................................
PGS2_MOUSE_8 241 ............................................................................................NLSKLGLSFNSI..tvmengslanvp............................................
PGS2_MOUSE_9 265 ............................................................................................HLRELHLDNNKL..lrvpag.laqhk............................................
PGS2_MOUSE_10 288 ............................................................................................YIQVVYLHNNNI..savgqndfcraghpsrkasysavslygnpvryweifpntfrcvyvrsaiqlgnyk.
PGS2_CHICK_1 80 mrlvllfvlllpvclatrfhqkglfdfmiede............gsadmaptddpvi.sgfgpvcpfrcqchlrvvqcsdlglervpkdlppDTTLLDLQNNKI..teikegdfknlk............................................
PGS2_CHICK_2 104 ............................................................................................NLHALILVNNKI..skispaafaplk............................................
PGS2_CHICK_3 128 ............................................................................................KLERLYLSKNNL..kelpen..mpk.............................................
PGS2_CHICK_4 149 ............................................................................................SLQEIRAHENEI..sklrkavfngln............................................
PGS2_CHICK_5 173 ............................................................................................QVIVLELGTNPLkssgiengafqgmk............................................
PGS2_CHICK_6 199 ............................................................................................RLSYIRIADTNI..tsipkg.lpp..............................................
PGS2_CHICK_7 220 ............................................................................................SLTELHLDGNKI..skidaeglsglt............................................
PGS2_CHICK_8 244 ............................................................................................NLAKLGLSFNSI..ssvengslnnvp............................................
PGS2_CHICK_9 268 ............................................................................................HLRELHLNNNEL..vrvpsg.lgehk............................................
PGS2_CHICK_10 291 ............................................................................................YIQVVYLHNNKI..asigindfcplgyntkkatysgvslfsnpvqyweiqpsafrcihersavqignyk.
Key
alpha helix RED
beta strand GREEN
core blocks UNDERSCORE
repeat **********
Multiple alignment of repeats only
You can also look at the alignment in RSF format, or MSF format
You can also get the unaligned sequences in FASTA format
Back to Schema