Name LRR
Number of sequences 4
Key
alpha helix RED
beta strand GREEN
core blocks UNDERSCORE
repeat **********
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ALS_HUMAN_01 75 malrkgglalallllswvalgprslegadpgtpgeaegpacpaacvcsydddadelsvfcssrnltrlpdgvpgGTQALWLDGNNLssvppaafqnls............................................................................
ALS_HUMAN_02 99 ..........................................................................SLGFLNLQGGQLgslepqallgle............................................................................
ALS_HUMAN_03 123 ..........................................................................NLCHLHLERNQLrslalgtfahtp............................................................................
ALS_HUMAN_04 147 ..........................................................................ALASLGLSNNRLsrledglfeglg............................................................................
ALS_HUMAN_05 171 ..........................................................................SLWDLNLGWNSLavlpdaafrglg............................................................................
ALS_HUMAN_06 195 ..........................................................................SLRELVLAGNRLaylqpalfsgla............................................................................
ALS_HUMAN_07 219 ..........................................................................ELRELDLSRNALraikanvfvqlp............................................................................
ALS_HUMAN_08 243 ..........................................................................RLQKLYLDRNLIaavapgaflglk............................................................................
ALS_HUMAN_09 267 ..........................................................................ALRWLDLSHNRVaglledtfpgll............................................................................
ALS_HUMAN_10 291 ..........................................................................GLRVLRLSHNAIaslrprtfkdlh............................................................................
ALS_HUMAN_11 315 ..........................................................................FLEELQLGHNRIrqlaersfeglg............................................................................
ALS_HUMAN_12 339 ..........................................................................QLEVLTLDHNQLqevkagaflglt............................................................................
ALS_HUMAN_13 363 ..........................................................................NVAVMNLSGNCLrnlpeqvfrglg............................................................................
ALS_HUMAN_14 387 ..........................................................................KLHSLHLEGSCLgrirphtftgls............................................................................
ALS_HUMAN_15 411 ..........................................................................GLRRLFLKDNGLvgieeqslwgla............................................................................
ALS_HUMAN_16 435 ..........................................................................ELLELDLTSNQLthlphrlfqglg............................................................................
ALS_HUMAN_17 459 ..........................................................................KLEYLLLSRNRLaelpadalgplq............................................................................
ALS_HUMAN_18 483 ..........................................................................RAFWLDVSHNRLealpnsllaplg............................................................................
ALS_HUMAN_19 507 ..........................................................................RLRYLSLRNNSLrtftpqpp.glerlwlegnpwdcgcplkalrdfalqnpsavprfvqaicegddcqppaytynnitcasppevvgldlrdlseahfapc
ALS_MOUSE_01 75 malrtgspalvvllafwvalgpcylqgtdpgasadaegpqcpvtctcsyddytdelsvfcssrnltqlpdgipvSTRALWLDGNNLssipsaafqnls............................................................................
ALS_MOUSE_02 99 ..........................................................................SLDFLNLQGSWLrslepqallglq............................................................................
ALS_MOUSE_03 123 ..........................................................................NLYHLHLERNLLrslaaglfrhtp............................................................................
ALS_MOUSE_04 147 ..........................................................................SLASLSLGNNLLgrleeglfrgls............................................................................
ALS_MOUSE_05 171 ..........................................................................HLWDLNLGWNSLvvlpdtvfqglg............................................................................
ALS_MOUSE_06 195 ..........................................................................NLHELVLAGNKLtylqpallcglg............................................................................
ALS_MOUSE_07 219 ..........................................................................ELRELDLSRNALrsvkanvfihlp............................................................................
ALS_MOUSE_08 243 ..........................................................................RLQKLYLDRNLItavapraflgmk............................................................................
ALS_MOUSE_09 267 ..........................................................................ALRWLDLSHNRVaglledtfpgll............................................................................
ALS_MOUSE_10 291 ..........................................................................GLHVLRLAHNAItslrprtfkdlh............................................................................
ALS_MOUSE_11 315 ..........................................................................FLEELQLGHNRIrqlgektfeglg............................................................................
ALS_MOUSE_12 339 ..........................................................................QLEVLTLNDNQIhevkvgaffglf............................................................................
ALS_MOUSE_13 363 ..........................................................................NVAVMNLSGNCLrslpehvfqglg............................................................................
ALS_MOUSE_14 387 ..........................................................................RLHSLHLEHSCLgrirlhtfagls............................................................................
ALS_MOUSE_15 411 ..........................................................................GLRRLFLRDNSIssieeqslagls............................................................................
ALS_MOUSE_16 435 ..........................................................................ELLELDLTANQLthlprqlfqglg............................................................................
ALS_MOUSE_17 459 ..........................................................................QLEYLLLSNNQLtmlsedvlgplq............................................................................
ALS_MOUSE_18 483 ..........................................................................RAFWLDLSHNRLetpaeglfsslg............................................................................
ALS_MOUSE_19 507 ..........................................................................RLRYLNLRNNSLqtfvpqp..glerlwldanpwdcscplkalrdfalqnpgvvprfvqtvcegddcqp.vytynnitcagpanvsgldlrdisetlfvhc
ALS_PAPPA_01 75 malrkgglalallllswvalgprslegaepgtpgeaegpacpatcacsyddevnelsvfcssrnltrlpdgipgGTQALWLDSNNLssippaafrnls............................................................................
ALS_PAPPA_02 99 ..........................................................................SLAFLNLQGGQLgslepqallgle............................................................................
ALS_PAPPA_03 123 ..........................................................................NLCHLHLERNQLrslavgtfaytp............................................................................
ALS_PAPPA_04 147 ..........................................................................ALALLGLSNNRLsrledglfeglg............................................................................
ALS_PAPPA_05 171 ..........................................................................NLWDLNLGWNSLavlpdaafrglg............................................................................
ALS_PAPPA_06 195 ..........................................................................GLRELVLAGNRLaylqpalfsgla............................................................................
ALS_PAPPA_07 219 ..........................................................................ELRELDLSRNALraikanvfaqlp............................................................................
ALS_PAPPA_08 243 ..........................................................................RLQKLYLDRNLIaavapgaflglk............................................................................
ALS_PAPPA_09 267 ..........................................................................ALRWLDLSHNRVaglledtfpgll............................................................................
ALS_PAPPA_10 291 ..........................................................................GLRVLRLSHNAIaslrprtfedlh............................................................................
ALS_PAPPA_11 315 ..........................................................................FLEELQLGHNRIrqlaersfeglg............................................................................
ALS_PAPPA_12 339 ..........................................................................QLEVLTLDHNQLqevkvgaflglt............................................................................
ALS_PAPPA_13 363 ..........................................................................NVAVMNLSGNCLrnlpeqvfrglg............................................................................
ALS_PAPPA_14 387 ..........................................................................KLHSLHLEGSCLgrirphtfagls............................................................................
ALS_PAPPA_15 411 ..........................................................................GLRRLFLKDNGLvgieeqslwgla............................................................................
ALS_PAPPA_16 435 ..........................................................................ELLELDLTSNQLthlphqlfqglg............................................................................
ALS_PAPPA_17 459 ..........................................................................KLEYLLLSHNRLaelpadalgplq............................................................................
ALS_PAPPA_18 483 ..........................................................................RAFWLDVSHNRLealpgsllaslg............................................................................
ALS_PAPPA_19 507 ..........................................................................RLRYLNLRNNSLrtftpqpp.glerlwlegnpwdcscplkalrdfalqnpsavprfvqaicegddcqppvytynnitcasppevagldlrdlgeahfapc
ALS_RAT_01 75 malrtggpalvvllafwvalgpchlqgtdpgasadaegpqcpvactcshddytdelsvfcssknlthlpddipvSTRALWLDGNNLssipsaafqnls............................................................................
ALS_RAT_02 99 ..........................................................................SLDFLNLQGSWLrslepqallglq............................................................................
ALS_RAT_03 123 ..........................................................................NLYYLHLERNRLrnlavglfthtp............................................................................
ALS_RAT_04 147 ..........................................................................SLASLSLSSNLLgrleeglfqgls............................................................................
ALS_RAT_05 171 ..........................................................................HLWDLNLGWNSLvvlpdtvfqglg............................................................................
ALS_RAT_06 195 ..........................................................................NLHELVLAGNKLtylqpalfcglg............................................................................
ALS_RAT_07 219 ..........................................................................ELRELDLSRNALrsvkanvfvhlp............................................................................
ALS_RAT_08 243 ..........................................................................RLQKLYLDRNLItavapgaflgmk............................................................................
ALS_RAT_09 267 ..........................................................................ALRWLDLSHNRVaglmedtfpgll............................................................................
ALS_RAT_10 291 ..........................................................................GLHVLRLAHNAIaslrprtfkdlh............................................................................
ALS_RAT_11 315 ..........................................................................FLEELQLGHNRIrqlgertfeglg............................................................................
ALS_RAT_12 339 ..........................................................................QLEVLTLNDNQItevrvgafsglf............................................................................
ALS_RAT_13 363 ..........................................................................NVAVMNLSGNCLrslpervfqgld............................................................................
ALS_RAT_14 387 ..........................................................................KLHSLHLEHSCLghvrlhtfagls............................................................................
ALS_RAT_15 411 ..........................................................................GLRRLFLRDNSIssieeqslagls............................................................................
ALS_RAT_16 435 ..........................................................................ELLELDLTTNRLthlprqlfqglg............................................................................
ALS_RAT_17 459 ..........................................................................HLEYLLLSYNQLttlsaevlgplq............................................................................
ALS_RAT_18 483 ..........................................................................RAFWLDISHNHLetlaeglfsslg............................................................................
ALS_RAT_19 507 ..........................................................................RVRYLSLRNNSLqtfspqp..glerlwldanpwdcscplkalrdfalqnpgvvprfvqtvcegddcqp.vytynnitcagpanvsgldlrdvsethfvhc
Key
alpha helix RED
beta strand GREEN
core blocks UNDERSCORE
repeat **********
Multiple alignment of repeats only
You can also look at the alignment in RSF format, or MSF format
You can also get the unaligned sequences in FASTA format
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