ank_2_ref6 - reference 6

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Multiple alignment of repeats only
Name                ANK
Number of sequences 4


Key

alpha helix         RED
beta strand         GREEN
core blocks         UNDERSCORE
repeat              **********


                                                                                           *****************************************                                                                                                                                                                                                                      
gabb_human_1    6  ...................................................................mslvdLGKK.LLEAARAGQDDEVRILMAN.......ga.pfttdw.......................................................................................................................................................................................................................
gabb_human_2   37  ........................................................................LGTSPLHLAAQYGHYSTTEVLLRA.......gvsrdartk.......................................................................................................................................................................................................................
gabb_human_3   70  ........................................................................VDRTPLHMAASEGHASIVEVLLKH.......gadvnakdm.......................................................................................................................................................................................................................
gabb_human_4  103  ........................................................................LKMTALHWATEHNHQEVVELLIKY.......gadvhtqsk.......................................................................................................................................................................................................................
gabb_human_5  136  ........................................................................FCKTAFDISIDNGNEDLAEILQIA......mqnqintnpe.spdtvtihaatpqfiigpggvvnltdetgvsavqfgnsstsvlatlaalaeasaplsnssetpvvateevvtaesvdgaiqqvvssggqqvitivtdgiqlgnlhsiptsgigqpiivtmpdgqqvltvpatdiaeetviseeppakrqcieiienrvesaeieerealqkqldeanreaqkyrqqllkkeqeaeayrqkleamtrlqtnkeav
mad3_human_1   73  mfqaaerpqewamegprdglkkerllddrhdsgldsmkdeeyeqmvkelqeirlepqevprgsepwkqqlteDGDSFLHLAIIHEEKALTMEVIRQv...kgdlaflnfqnn.......................................................................................................................................................................................................................
mad3_human_2  110  ........................................................................LQQTPLHLAVITNQPEIAEALLGA.......gcdpelrdf.......................................................................................................................................................................................................................
mad3_human_3  143  ........................................................................RGNTPLHLACEQGCLASVGVLTQS.cttphlhsilkatny.......................................................................................................................................................................................................................
mad3_human_4  182  ........................................................................NGHTCLHLASIHGYLGIVELLVSL.......gadvnaqepc......................................................................................................................................................................................................................
mad3_human_5  216  ........................................................................NGRTALHLAVDLQNPDLVSLLLKC.......gadvnrvty.qgyspyqltwgrpstriqqqlgqltlenlqmlpesedeesydtesefteftedelpyddcvfggqrltl.................................................................................................................................................
cdn7_mouse_1    8  .................................................................mlleevcVGDR.LSGARARGDVQEVRRLLHR......elvhpdalnr.......................................................................................................................................................................................................................
cdn7_mouse_2   41  ........................................................................FGKTALQVMMF.GSPAVALELLKQ.......gaspnvqda.......................................................................................................................................................................................................................
cdn7_mouse_3   73  ........................................................................SGTSPVHDAARTGFLDTLKVLVEH.......gadvnalds.......................................................................................................................................................................................................................
cdn7_mouse_4  106  ........................................................................TGSLPIHLAIREGHSSVVSFLAP........esdlhhrda.......................................................................................................................................................................................................................
cdn7_mouse_5  138  ........................................................................SGLTPLELARQRGAQNLMDILQGH.......mmipm...........................................................................................................................................................................................................................
cdn6_human_1    5  ....................................................................maepWGNE.LASAAARGDLEQLTSLLQN.......nvnvnaqng.......................................................................................................................................................................................................................
cdn6_human_2   37  ........................................................................FGRTALQVMKL.GNPEIARRLLLR.......ganpdlkdr.......................................................................................................................................................................................................................
cdn6_human_3   69  ........................................................................TGFAVIHDAARAGFLDTLQTLLEF.......qadvniedn.......................................................................................................................................................................................................................
cdn6_human_4  102  ........................................................................EGNLPLHLAAKEGHLRVVEFLVKH......tasnvghrnh.......................................................................................................................................................................................................................
cdn6_human_5  136  ........................................................................KGDTACDLARLYGRNEVVSLMQAN.......gaggatnlq.......................................................................................................................................................................................................................

Key

alpha helix         RED
beta strand         GREEN
core blocks         UNDERSCORE
repeat              **********
Multiple alignment of repeats only
You can also look at the alignment in RSF format, or MSF format
You can also get the unaligned sequences in FASTA format
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