apo_1_ref6 - reference 1

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Multiple alignment of complete sequences
Name                APO
Number of sequences 20


Key

alpha helix         RED
beta strand         GREEN
core blocks         UNDERSCORE
repeat              **********


                   **********************
AP11_ONCMY_1   64  mQLTQSLDNLQQYADATSQSLa    85  
AP11_ONCMY_2   86  pYSEAFGTQLTDATAAVRAEVm   107  
AP11_ONCMY_3  119  pKRAELKEVLDKHIDEYRKKLe   140  
AP11_ONCMY_4  141  pLIKEHIELRRTEMEAFRAKMe   162  
AP11_ONCMY_5  163  pIVEELRAKVAINVEETKTKLm   184  
AP11_ONCMY_6  185  pIVEIVRAKLTERLEELRTLAa   206  
AP11_ONCMY_7  207  pYAEEYKEQMIKAVGEVREKVs   228  
AP11_ONCMY_8  240  pAAEQAKQKLLAFYETISQAMk   261  
AP12_ONCMY_1   64  vQLSQSLDNLQQYAQTASESLa    85  
AP12_ONCMY_2   86  pYSEAIGVQLTEATAAVRAEVm   107  
AP12_ONCMY_3  119  pKRAELKEVLDKHIDEYRKRLe   140  
AP12_ONCMY_4  141  pLIKDIVEQRRTELEAFRVKIe   162  
AP12_ONCMY_5  163  pVVEEMRAKVSANVEETKAKLm   184  
AP12_ONCMY_6  185  pIVETVRAKLTERLEELRTLAs   206  
AP12_ONCMY_7  207  pYAEEYKEQMVKAVGEVREKVv   228  
AP12_ONCMY_8  240  pAAEQAKEKLMALYETISQAMk   261  
APA1_ANAPL_1   67  lKLADNLDTLGAAAAKLREDMa    88  
APA1_ANAPL_2   89  pYYKEVREMWLKDTESLRAELt   110  
APA1_ANAPL_3  122  pFLDQFSAKWTEELEQYRQRLa   143  
APA1_ANAPL_4  144  pVAEELKELTKQKVELMQQKLt   165  
APA1_ANAPL_5  166  pVAEEARDRLRGHVEELRKNLa   187  
APA1_ANAPL_6  188  pYSDELRQKLSQKLEEIREKGi   209  
APA1_ANAPL_7  210  pQAAEYQAKVVEQLSNLREKMt   231  
APA1_ANAPL_8  243  pYAENLKTRFISLLDELQKTVa   264  
APA1_BOVIN_1   67  lKLLDNWDTLASTLSKVREQLg    88  
APA1_BOVIN_2   89  pVTQEFWDNLEKETASLRQEMh   110  
APA1_BOVIN_3  122  pYLDEFQKKWHEEVEIYRQKVa   143  
APA1_BOVIN_4  144  pLGEEFREGARQKVQELQDKLs   165  
APA1_BOVIN_5  166  pLAQELRDRARAHVETLRQQLa   187  
APA1_BOVIN_6  188  pYSDDLRQRLTARLEALKEGG.   209  
APA1_BOVIN_7  209  gSLAEYHAKASEQLKALGEKAk   230  
APA1_BOVIN_8  242  pVLESLKVSILAAIDEASKKLn   263  
APA1_BRARE_1   64  lQLSESLTKLQEYAQTTSQALt    85  
APA1_BRARE_2   86  pYAETISTQLMENTKQLRERVm   107  
APA1_BRARE_3  119  pHRAELYTALQKHIDEYREKLe   140  
APA1_BRARE_4  141  pVFQEYSALNRQNAEQLRAKLe   162  
APA1_BRARE_5  163  pLMDDIRKAFESNIEETKSKVv   184  
APA1_BRARE_6  185  pMVEAVRTKLTERLEDLRTMAa   206  
APA1_BRARE_7  207  pYAEEYKEQLVKAVEEAREKIa   228  
APA1_BRARE_8  240  pYMENVRTTFAQMYETIAKAIq   261  
APA1_CANFA_1   67  lKLLDNWDSLSSTVTKLREQIg    88  
APA1_CANFA_2   89  pVTQEFWDNLEKETEVLRQEMs   110  
APA1_CANFA_3  122  pYLDDFQKKWQEEVELYRQKVa   143  
APA1_CANFA_4  144  pLGSELREGARQKLQELQEKLs   165  
APA1_CANFA_5  166  pLAEELRDRARTHVDALRAQLa   187  
APA1_CANFA_6  188  pYSDDLRERLAARLEALKEGGg   209  
APA1_CANFA_7  210  aSLAEYHARASEQLSALGEKAr   231  
APA1_CANFA_8  243  pVLESFKVSLLAAIDEATKKLn   264  
APA1_CHICK_1   67  lKLADNLDTLSAAAAKLREDMa    88  
APA1_CHICK_2   89  pYYKEVREMWLKDTEALRAELt   110  
APA1_CHICK_3  122  pFLDQFSAKWTEELEQYRQRLt   143  
APA1_CHICK_4  144  pVAQELKELTKQKVELMQAKLt   165  
APA1_CHICK_5  166  pVAEEARDRLRGHVEELRKNLa   187  
APA1_CHICK_6  188  pYSDELRQKLSQKLEEIREKGi   209  
APA1_CHICK_7  210  pQASEYQAKVMEQLSNLREKMt   231  
APA1_CHICK_8  243  pYAENLKNRLISFLDELQKSVa   264  
APA1_COTJA_1   67  lKLADNLDTLSAAAAKLREDMt    88  
APA1_COTJA_2   89  pYYREVREMWLKDTEALRAELt   110  
APA1_COTJA_3  122  pFLDQFSAKWTEEVEQYRQRLa   143  
APA1_COTJA_4  144  pVAQELKDLTKQKVELMQAKLt   165  
APA1_COTJA_5  166  pVAEEVRDRLREQVEELRKNLa   187  
APA1_COTJA_6  188  pYSSELRQKLSQKLEEIRERGi   209  
APA1_COTJA_7  210  pQASEYQAKVVEQLSNLREKMt   231  
APA1_COTJA_8  243  pYAENLKNRLIDLLDEVQKTMa   264  
APA1_HUMAN_1   68  lKLLDNWDSVTSTFSKLREQLg    89  
APA1_HUMAN_2   90  pVTQEFWDNLEKETEGLRQEMs   111  
APA1_HUMAN_3  123  pYLDDFQKKWQEEMELYRQKVe   144  
APA1_HUMAN_4  145  pLRAELQEGARQKLHELQEKLs   166  
APA1_HUMAN_5  167  pLGEEMRDRARAHVDALRTHLa   188  
APA1_HUMAN_6  189  pYSDELRQRLAARLEALKENGg   210  
APA1_HUMAN_7  211  aRLAEYHAKATEHLSTLSEKAk   232  
APA1_HUMAN_8  244  pVLESFKVSFLSALEEYTKKLn   265  
APA1_MACFA_1   68  lKLLDNWDSVTSTVSKLREQLg    89  
APA1_MACFA_2   90  pVTQEFWDNLEKETEGLRQEMs   111  
APA1_MACFA_3  123  pYLDDFQKKWQEEMELYRQKVe   144  
APA1_MACFA_4  145  pLRAELHEGTRQKLHELHEKLs   166  
APA1_MACFA_5  167  pLGEEVRDRARAHVDALRTHLa   188  
APA1_MACFA_6  189  pYSDELRQRLAARLEALKENGg   210  
APA1_MACFA_7  211  aRLAEYHAKASEHLSTLSEKAk   232  
APA1_MACFA_8  244  pVLESFKVSFLSALEEYTKKLs   265  
APA1_MOUSE_1   67  lNLLENWDTLGSTVSQLQERLg    88  
APA1_MOUSE_2   89  pLTRDFWDNLEKETDWVRQEMn   110  
APA1_MOUSE_3  122  pYLDEFQKKWKEDVELYRQKVa   143  
APA1_MOUSE_4  144  pLGAELQESARQKLQELQGRLs   165  
APA1_MOUSE_5  166  pVAEEFRDRMRTHVDSLRTQLa   187  
APA1_MOUSE_6  188  pHSEQMRESLAQRLAELKSN..   208  
APA1_MOUSE_7  208  pTLNEYHTRAKTHLKTLGEKAr   229  
APA1_MOUSE_8  241  pMLETLKTKAQSVIDKASETLt   262  
APA1_PIG_1     67  lKLLDNWDSLGSTFTKVREQLg    88  
APA1_PIG_2     89  pVTQEFWDNLEKETEALRQEMs   110  
APA1_PIG_3    122  pYLDDFQNKWQEEMETYRQKMa   143  
APA1_PIG_4    144  pLGAEFREGARQKVQELQEKLs   165  
APA1_PIG_5    166  pLAEELRDRLRAHVEALRQHVa   187  
APA1_PIG_6    188  pYSDDLRQRMAARFEALKEGG.   209  
APA1_PIG_7    209  gSLAEYQAKAQEQLKALGEKAk   230  
APA1_PIG_8    242  pVLENLKVSILAAIDEASKKLn   263  
APA1_RABIT_1   67  lKLLDNWDSLSSTVSKLQEQLg    88  
APA1_RABIT_2   89  pVTQEFWDNLEKETEGLREEMn   110  
APA1_RABIT_3  122  pYLDEFQKKWQEEVERYRQKVe   143  
APA1_RABIT_4  144  pLGAELRESARQKLTELQEKLs   165  
APA1_RABIT_5  166  pLAEELRDSARTHVDTLRTKLa   187  
APA1_RABIT_6  188  pYSNELQQRLAARLESIKEGGg   209  
APA1_RABIT_7  210  aSLAEYQAKAREHLSVLSEKAr   231  
APA1_RABIT_8  243  pVLESFKASVQNVLDEATKKLn   264  
APA1_RAT_1     67  lNLLDNWDTLGSTVGRLQEQLg    88  
APA1_RAT_2     89  pVTQEFWANLEKETDWLRNEMn   110  
APA1_RAT_3    122  pHLDEFQEKWNEEVEAYRQKLe   143  
APA1_RAT_4    144  pLGTELHKNAK....EMQRHLk   161  
APA1_RAT_5    162  vVAEEFRDRMRVNADALRAKFg   183  
APA1_RAT_6    184  lYSDQMRENLAQRLTEIRNH..   204  
APA1_RAT_7    204  pTLIEYHTKAGDHLRTLGEKAk   225  
APA1_RAT_8    237  pVLEAWKAKIMSMIDEAKKKLn   258  
APA1_SALSA_1   64  mQLSQSLDNLQQFADSTSKSW.    85  
APA1_SALSA_2   85  pPTPRSSAPSCDATATVRAEVm   106  
APA1_SALSA_3  118  pKRAELTEVLNKHIDEYRKKLe   139  
APA1_SALSA_4  140  pLIKQHIELRRTEMDAFRAKId   161  
APA1_SALSA_5  162  pVVEEMRAKVAVNVEETKTKLm   183  
APA1_SALSA_6  184  pIVEIVRAKLTERLEELRTLAa   205  
APA1_SALSA_7  206  pYAEEYKEQMFKAVGEVREKVa   227  
APA1_SALSA_8  239  pPPRRPSKSSWLSTRPSARP..   259  
APA1_SALTR_1   64  vQLSQSLDNLQQYAQTTSQSLa    85  
APA1_SALTR_2   86  pYSEAFGAQLTDAAAAVRAEVm   107  
APA1_SALTR_3  119  pKRAELKEVLDKHIDEYRKKLe   140  
APA1_SALTR_4  141  pLIKEIVEQRRTELEAFRVKMe   162  
APA1_SALTR_5  163  pVVEEMRAKVSTNVEETKAKLm   184  
APA1_SALTR_6  185  pIVETVRAKLTERLEELRTLAa   206  
APA1_SALTR_7  207  pYAEEYKEQMFKAVGEVREKVg   228  
APA1_SALTR_8  240  pAAEQAKEKLMDFYETISQAMk   261  
APA1_SPAAU_1   64  tNLAQRIEEMYTQIKTLQGSVs    85  
APA1_SPAAU_2   86  pMTDSFYNTVMEVTKDTRESLn   107  
APA1_SPAAU_3  119  pQNEQLKQVIEKHLNDYRTLLt   140  
APA1_SPAAU_4  141  pIYNDYKTKHDEEMAALKTRLe   162  
APA1_SPAAU_5  163  pVMEELRTKIQANVEETKAVLm   184  
APA1_SPAAU_6  185  pMVETVRTKVTERLESLREVVq   206  
APA1_SPAAU_7  207  pYVQEYKEQMKQMY.DQAQTVd   227  
APA1_SPAAU_8  237  pLVEEIKVKMNAIFEIIAASVt   258  
APA1_TUPGB_1   67  lKLVDNWDTLGSTFQKVHEHLg    88  
APA1_TUPGB_2   89  pVAQEFWEKLEKETEELRREIn   110  
APA1_TUPGB_3  122  pFLDEIQKKWQEDLERYRQKVe   143  
APA1_TUPGB_4  144  pLSAQLREGARQKLMELQEQVt   165  
APA1_TUPGB_5  166  pLGEDLRDSVRAYADTLRTQLa   187  
APA1_TUPGB_6  188  pYSEQMRKTLGARLEAIKEGGs   209  
APA1_TUPGB_7  210  aSLAEYHAKASEQLSALGEKAk   231  
APA1_TUPGB_8  243  pMWESFKTGVLNVIDEAAKKLt   264  
Q9TS49-F_1     43  kKLADNWDTVSSALLKAREQMk    64  
Q9TS49-F_2     65  pIAMEFWGNLEKDTEGLRQTVs    86  
Q9TS49-F_3     98  pYLDSFQKKVEEELELYRQKVa   119  
Q9TS49-F_4    120  pLSAEWREQARQKAQELQQKAg   141  
Q9TS49-F_5    142  eLGQQHRDRVRTHVDALRTDLa   163  
Q9TS49-F_6    164  pYGEEARKLLLQRLQDIKAKS.   185  
Q9TS49-F_7    185  gDLAEYQTKLSEHLKSFGEKAq   206  
Q9TS49-F_8    218  pLWEGIKAGAMSMLEELGKKLn   239  
Q9Z2L4_1       67  lNLLENWDTLGSTVGRLQEQLg    88  
Q9Z2L4_2       89  pVTQEFWDNLEKETEWLRREMn   110  
Q9Z2L4_3      122  pYLDQFQTKWQEEVALYRQKMe   143  
Q9Z2L4_4      144  pLGAELRDGARQKLQELQEKLt   165  
Q9Z2L4_5      166  pLGEDLRDRMRHHVDALRTKMt   187  
Q9Z2L4_6      188  pYSDQMRDRLAERLAQLKDS..   208  
Q9Z2L4_7      208  pTLAEYHTKAADHLKAFGEKAk   229  
Q9Z2L4_8      241  pVFESFKTRIMSMVEEASKKLn   262  

Key

alpha helix         RED
beta strand         GREEN
core blocks         UNDERSCORE
repeat              **********
Multiple alignment of the complete sequences
You can also look at the alignment in RSF format, or MSF format
You can also get the unaligned sequences in FASTA format
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