apo_1_ref6 - reference 6

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Multiple alignment of complete sequences
Multiple alignment of repeats only

Number of sequences              20

Key:

A	APO repeat - type A
B	APO repeat - type B
C	APO repeat - type C
D	APO repeat - type D
E	APO repeat - type E
F	APO repeat - type F
G	APO repeat - type G
H	APO repeat - type H
I	APO repeat - type I
J	APO repeat - type J
K	APO repeat - type K
L	APO repeat - type L
M	APO repeat - type M
U	APO repeat - type unknown

Sequence Name	# Repeats
			64	85		86	107		119	140		141	162		163	184		185	206		207	228		240	261
AP11_ONCMY	8		A			B			B			B			B			B			B			B
			64	85		86	107		119	140		141	162		163	184		185	206		207	228		240	261
AP12_ONCMY	8		A			B			B			B			B			B			B			B
			67	88		89	110		122	143		144	165		166	187		188	209		210	231		243	264
APA1_ANAPL	8		C			B			B			B			B			B			B			B
			67	88		89	110		122	143		144	165		166	187		188	209		209	230		242	263
APA1_BOVIN	8		C			B			B			B			B			B			B			B
			64	85		86	107		119	140		141	162		163	184		185	206		207	228		240	261
APA1_BRARE	8		A			B			B			B			B			B			B			B
			67	88		89	110		122	143		144	165		166	187		188	209		210	231		243	264
APA1_CANFA	8		C			B			B			B			B			B			B			B
			67	88		89	110		122	143		144	165		166	187		188	209		210	231		243	264
APA1_CHICK	8		C			B			B			B			B			B			B			B
			67	88		89	110		122	143		144	165		166	187		188	209		210	231		243	264
APA1_COTJA	8		C			B			B			B			B			B			B			B
			68	89		90	111		123	144		145	166		167	188		189	210		211	232		244	265
APA1_HUMAN	8		C			B			B			B			B			B			B			B
			68	89		90	111		123	144		145	166		167	188		189	210		211	232		244	265
APA1_MACFA	8		C			B			B			B			B			B			B			B
			67	88		89	110		122	143		144	165		166	187		188	208		208	229		241	262
APA1_MOUSE	8		C			B			B			B			B			B			B			B
			67	88		89	110		122	143		144	165		166	187		188	209		209	230		242	263
APA1_PIG	8		C			B			B			B			B			B			B			B
			67	88		89	110		122	143		144	165		166	187		188	209		210	231		243	264
APA1_RABIT	8		C			B			B			B			B			B			B			B
			67	88		89	110		122	143		144	161		162	183		184	204		204	225		237	258
APA1_RAT	8		C			B			B			B			B			B			B			B
			64	85		85	106		118	139		140	161		162	183		184	205		206	227		239	259
APA1_SALSA	8		A			B			B			B			B			B			B			U
			64	85		86	107		119	140		141	162		163	184		185	206		207	228		240	261
APA1_SALTR	8		A			B			B			B			B			B			B			B
			64	85		86	107		119	140		141	162		163	184		185	206		207	227		237	258
APA1_SPAAU	8		U			B			B			B			B			B			B			B
			67	88		89	110		122	143		144	165		166	187		188	209		210	231		243	264
APA1_TUPGB	8		C			B			B			B			B			B			B			B
			43	64		65	86		98	119		120	141		142	163		164	185		185	206		218	239
Q9TS49-F	8		C			B			B			B			B			B			B			B
			67	88		89	110		122	143		144	165		166	187		188	208		208	229		241	262
Q9Z2L4	8		C			B			B			B			B			B			B			B

Key:

A	APO repeat - type A
B	APO repeat - type B
C	APO repeat - type C
D	APO repeat - type D
E	APO repeat - type E
F	APO repeat - type F
G	APO repeat - type G
H	APO repeat - type H
I	APO repeat - type I
J	APO repeat - type J
K	APO repeat - type K
L	APO repeat - type L
M	APO repeat - type M
U	APO repeat - type unknown

Multiple alignment of complete sequences
Multiple alignment of repeats only

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