Name KTN+TRK
Number of sequences 7
Key
alpha helix RED
beta strand GREEN
core blocks UNDERSCORE
repeat **********
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trka_metma_1 1 mKAVIIGAGEVGYHIAKALspkn..dVVIIDkdeeaakradel..dvLVIEGNGANAEILSRv.lqnadlLVAVTgvdevNIVACMTAKLimknkngwkdtKTIARVSNPdyidspvtsraqv..gVDLMICPelalasevadilsspsaidaemfaeg.kvRMTEFAIs...peskLVGKHMQDLkl...adcCIVSAVfredQIIIPhgDDLIKANDHMVVVgk.pesmedlesvfgskvshr
trka_metma_2 231 tRILLIGCGIVGMYLAKLIdkeenadLRIIEhsksrcievaeilenaLVLNGDGTDVSLLREeniedmdvVVAVTdsdekNLLCSLLAKQlg.......akKVIARADRSdylplfemv......gIDMAVSPreatvnevlkltmgrgiqtltti.egeraEIIEYTAs...eksrIVGKPLNKVkf...pkgAP.................................................
Q9UXR7_1 1 mKAVVIGAGEVGYHIAKFLslth..dVIVVEkdeevarradel..dvQVLEGNGANADILTSi.lhdadiLIAVTgvdevNIVACMTAKLilrshpgwketKTIARVSNPdyidvpvtsraqv..gVDIMICPelalasevaevlsspsaidaqvfaeg.kvQMTEFAIs...peskLVGKQMQDLkl...adcCIVSAVfrdhRIFIPhgSDVIKANDHVVVVgk.peameslssifgnevhhk
Q9UXR7_2 231 nRVLIIGCGIVGFYLAKLIskeenvdLKIIEhrkdrcievaetlegvLILNGDGTDLNLLKEeniedmdvVIAVTdsdekNLLCALLAKQlg.......akKVIARADRSdylplfemv......gIDMAVSPreatvnevlkltmgrgiqtltti.egekaEIIEYTAs...esskIVGRPLSKVkf.........................................................
o29420_1 1 mRIVIAGAGEVGYHLAMSLapnh..dVIIIEkdvsrfervsel..dvVAINGNAANMKVLRDagveradvFLAVTgndevNLLSGLAAKKvg.......akNVIVRVENPeyvdrpivkehpl..gYDVLICPqlslaqeaarligipgaievvtfsgg.kvEMIELQVm...egskADGKAIADLyl...pqnVVIASIyrngHIEIPrgDTVLRAGDRVAIVsk.tedvemlkgifgppvt..
o29420_2 223 rRVTIFGAGTIGSYTAKILakgmt.sVKLIEssmercealsgelegvRIVCGDATDIEFLIEeeigksdaVLAATesdekNLLISLLSKNlg.......arIAIAKVEKReyvklfeav......gVDVALNPrsvtynevskllrtmrietlaei.eg..tAVVEVVVr....ntrLVGKALKDLpl...pkdAIIGAIvrgnECLIPrgDTTIEYEDRLLVFak.wdeiekieeifr......
trka_ecoli_1 1 mKIIILGAGQVGGTLAENLvgenn.dITVVDtngerlrtlqdkf.dlRVVQGHGSHPRVLREagaddadmLVAVTssdetNMVACQVAYSlf......ntpNRIARIRSPdyvrdadklfhsdavpIDHLIAPeqlvidniyrlieypgalqvvnfaeg.kvSLAVVKAy...yggpLIGNALSTMrehmphidTRVAAIfrhdRPIRPqgSTIVEAGDEVFFIaa.sqhiravmselqrlekpy
trka_ecoli_2 233 kRIMLVGGGNIGAGLARRLekdy..sVKLIErnqqraaelaeklqntIVFFGDASDQELLAEehidqvdlFIAVTnddeaNIMSAMLAKRmg.......akKVMVLIQRRayvdlvqgs......vIDIAISPqqatisallshvrkadivgvsslrrg.vaEAIEAVAhgdestsrVVGRVIDEIkl...ppgTIIGAVvrgnDVMIAndNLRIEQGDHVIMFltdkkfitdverlfqpspffl
trka_salty_1 1 mKIIILGAGQVGGTLAENLvgenn.dITVVDtngerlrslqdkf.dlRVVQGHGSHPRVLREagaddadmLVAVTssdetNMVACQVAYSlf......ntpNRIARIRSPdyvrdadklfhseavpIDHLIAPeqlvidniyrlieypgalqvvnfaeg.kvSLAVVKAy...yggpLIGNALSTMrehmphidTRVAAIfrhdRPIRPqgSTIVEAGDEVFFIaa.sqhiravmselqrlekpy
trka_salty_2 233 kRIMLVGGGNIGAGLARRLekdy..sVKLIErdqqraaelaeklqntIVFFGDASDQELLAEehidqvdlFIAVTnddeaNIMSAMLAKRmg.......akKVMVLIQRRayvdlvqgs......vIDIAISPqqatisallshvrkadivgvsslrrg.vaEAIEAVAhgdestsrVVGRVIDEIkl...ppgTIIGAVvrgnDVMIAndNLRIEQGDHVIMFltdkkfitdverlfqpspffl
trka_vibal_1 1 mKIIILGAGQVGGTLAENLvgenn.dITIVDnnadrlrelqdky.dlRVVNGHASHPDVLHEagaqdadmLVAVTntdetNMAACQVAFTlf......ntpNRVARIRSPeylaekealfksgaipVDHLIAPeelvtsyierliqypgalqvvsfaeq.kvSLVAVKAy...yggpLVGNALSALrehmphidTRVAAIfrqgRPIRPqgTTIIEADDEVFFVaa.snhirsvmselqrlekpy
trka_vibal_2 233 rRIMIVGGGNIGASLAKRLeqny..sVKLIErnyqraeklseelentIVFCGDAADQELLSEenidqvdvFIALTnedetNIMSAMLAKRmg.......akKVMVLIQRGayvdlvqgg......vIDVAISPqqatisallthvrradivnvsslrrg.aaEAIEAVAhgdestskVVGRAIGDIkl...ppgTTIGAIvrgeEVLIAhdRTVIEQDDHVVMFlvnkkyvsdvealfqpspffl
p71354_1 1 mKIIILGAGQVGTTLAENLvsedn.dITLVDnespqlqtlqekh.dlRVVQGSPSSPKVLRDagaadadlMVAVTasdeiNMVACQMGYTlf......ntpTRIARIRNSeylrekdklfnnenipIDHLISPenlvtdeitrliaypgalqvahfann.riSIVVVKAy...yggaLVGYALSAFrehmphidCRIMSIlrngKPIRPqgSTIVEAGDEITFIca.tehikaimgelqrlekpy
p71354_2 233 kRVMIVGGGNVAFGVAKRLensc..tVKLIErdsnraqalaeklpktLVFNGDASDQNLLFEehiesvdvFLSLSsddeaNIMSALLAKRlg.......akKAMVLIQRIayinliqgg......tIDIAVSPqqvtisallghvrkgdvknvatlrhg.iaEAIEIVAhgnvntsnIVGRKIGELrl...pmgIIIGALlrgnDVIIArrQVIIEEGDHIVIYlsdkknvpeieklfqpsaffi
Key
alpha helix RED
beta strand GREEN
core blocks UNDERSCORE
repeat **********
Multiple alignment of repeats only
You can also look at the alignment in RSF format, or MSF format
You can also get the unaligned sequences in FASTA format
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