Name SUSHI
Number of sequences 6
Key
alpha helix RED
beta strand GREEN
core blocks UNDERSCORE
repeat **********
******************************************************************************
Q07033_1 19 SCCTi.PSRPINmtfknsvetda..NANYNI.GDTIEYLCLP.GYRKQK.mgpIYAKCTG.....TGWTL.FNQCIKr 84
Q07033_2 85 RCPSp.RDIDNGhld..........IGGVDF.GSSITYSCNS.GYYLIG...eYKSYCKLgstgsMVWNPkAPICESv 146
Q07033_3 147 KCQLp.PSISNGrhngy........NDFYTD.GSVVTYSCNS.GYSLIG...nSGVLCSG.....GEWSN.PPTCQIv 204
Q07033_4 205 KCPH..PTILNGylssgf.......KRSYSY.NDNVDFTCKY.GYKLSG...sSSSTCSPg....NTWQPeLPKCVR. 264
VCP_VACCV_1 19 SCCTi.PSRPINmkfknsvetda..NANYNI.GDTIEYLCLP.GYRKQK.mgpIYAKCTG.....TGWTL.FNQCIKr 84
VCP_VACCV_2 85 RCPSp.RDIDNGqld..........IGGVDF.GSSITYSCNS.GYHLIG...eSKSYCELgstgsMVWNPeAPICESv 146
VCP_VACCV_3 147 KCQSp.PSISNGrhngy........EDFYTD.GSVVTYSCNS.GYSLIG...nSGVLCSG.....GEWSD.PPTCQIv 204
VCP_VACCV_4 205 KCPH..PTISNGylssgf.......KRSYSY.NDNVDFKCKY.GYKLSG...sSSSTCSPg....NTWKPeLPKCVR. 264
P87616_1 19 SCCPi.PSRPITmkfkgtv......DSHYNI.GDTIEYLCLP.GYRKQK.mgpIYAKCTG.....TGWTL.FNQCIKr 80
P87616_2 81 RCPSp.RDIDNGqld..........IGGVDF.GSSITYSCNS.GYHLIG...eSKSYCELgstgsMVWNPeAPICESv 142
P87616_3 143 KCQSp.PSISNGrhngy........EDFYTD.GSVVTYSCNS.GYSLIG...nSGVLCSG.....GEWSD.PPTCQIv 200
P87616_4 201 KCPH..PTISNGylssgf.......KRSYSY.NDNVDFKCKY.GYKLSG...sSSSTCSPg....NTWQPeLPKCVR. 260
CFHE_HUMAN_1 22 FCDF..PKINHGilydeekyk....PFSQVPtGEVFYYSCEY.NFVSPSksfwTRITCAE.....EGWSP.TPKCLR. 86
CFHE_HUMAN_2 86 LCFF..PFVENGhsess........GQTHLE.GDTVQIICNT.GYRLQN..neNNISCVE.....RGWST.PPKCRSt 143
CFHE_HUMAN_3 148 KCGPp.PPIDNGditsfl.......LSVYAP.GSSVEYQCQN.LYQLEG...nNQITCRN.....GQWSE.PPKCLD. 206
CFHE_HUMAN_4 206 PCVIsqEIMEKYniklkwtnq....QKLYSRtGDIVEFVCKS.GYHPTK.shsFRAMCQN.....GKLV..YPSCEEk 270
APOH_RAT_1 35 VCPFa.GILENGvvr..........YTTFEY.PNTIGFACNP.GYYLNG...tSSSKCTEe....GKWSPeLPVCARi 92
APOH_RAT_2 93 TCPPp.PIPKFAalkeyktsv....GNSSFY.QDTVVFKCLP.HFAMFG...nDTVTCTAh....GNWTQ.LPECREv 155
APOH_RAT_3 156 KCPFp.SRPDNGfvnypa.......KPVLSY.KDKAVFGCHE.TYKLDG...pEEVECTKt....GNWSA.LPSCKA. 215
APOH_RAT_4 215 SCKLs.VKKATVlyqgqrvkiqdqfKNGMMH.GDKVHFYCKNkEKKCSY...tEEAQCI......DGTIE.IPKCFKe 280
DAF_CAVPO_1 32 DCGPl.PVVPRAhpasasag.....STSFPE.NTTVLYTCDQ.GFVKIP.gkpDAVVCIS.....SRWTDiEEFCNR. 95
DAF_CAVPO_2 95 SCEVp.PRLPYAilksayis.....KNYFPV.DTVVEYECRP.GYRKKYpiqsGKITCRDd....LTWSTpAEFCEKk 160
DAF_CAVPO_3 161 QCPNp.GELVNGninv.........TTDLLL.GSQIFFSCDP.GYRLTG...eASAFCMIkg.naVGWSSsLPTCIKi 222
DAF_CAVPO_4 223 ICPEp.PQIENGrivne........EDTYEY.RHVVTYECNK.GFVLTG...kSHISCIVrd.dvGEWSDpPPTCRVk 285
Key
alpha helix RED
beta strand GREEN
core blocks UNDERSCORE
repeat **********
Multiple alignment of the complete sequences
You can also look at the alignment in RSF format, or MSF format
You can also get the unaligned sequences in FASTA format
Back to Schema