sushi_5_ref6 - reference 1

Back to Schema

Back to Index
Multiple alignment of complete sequences
Name                SUSHI
Number of sequences 3


Key

alpha helix         RED
beta strand         GREEN
core blocks         UNDERSCORE
repeat              **********


                   **************************************************************************
C4BP_BOVIN_1   49  SCGIpPYLDFAfpineln.....ETRFET.GTTLRYTCRPGYRISS.rkNFLICDGt....DNWKY.KEFCVKk   110  
C4BP_BOVIN_2  111  RCENpGELLNGqviv........KTDYSF.GSEIEFSCSEGYVLIG..sANSYCQLqd.kgVVWSDpLPQCIIa   172  
C4BP_BOVIN_3  173  KCEPpPTISNGrhnggd......EDFYTY.GSSVTYSCDRDFSMLG..kASISCRVenktiGVWSPsPPSCKKv   237  
C4BP_BOVIN_4  238  ICVQ.PVVKDGkitsgf......GPIYTY.QQSIVYACNKGFRLEG..dSLIHCEAd....NSWNPpPPTCELn   297  
C4BP_BOVIN_5  298  GCLGlPHIPHAlwerydhqtqteQQVYDI.GFVLSYKCHFGYKPETdgpTTVTCQSn....LEWSP.YIECKEv   365  
C4BP_BOVIN_6  366  CCPEpNLNNYGsitlhrrpststHCTYIS.GDKISYECHSKYMFD......ALCTKh....GTWSPrTPECRP.   428  
C4BP_BOVIN_7  428  DCKSpPVIAHGqhkvv.......SKFFTF.DHQAVYECDKGYILVG..aKELSCTS.....SGWSPaVPQCKA.   486  
C4BP_BOVIN_8  486  LCLK.PEIEYGrlsve.......KVRYVE.PEIITIQCESGYSVVG..sENITCSEd....RTWYPeVPKCEWe   544  
C4BP_HUMAN_1   49  NCGPpPTLSFAapmditlt....ETRFKT.GTTLKYTCLPGYVRSH.stQTLTCNSd....GEWVY.NTFCIYk   111  
C4BP_HUMAN_2  112  RCRHpGELRNGqvei........KTDLSF.GSQIEFSCSEGFFLIG..sTTSRCEVqd.rgVGWSHpLPQCEIv   173  
C4BP_HUMAN_3  174  KCKPpPDIRNGrhsge.......ENFYAY.GFSVTYSCDPRFSLLG..hASISCTVenetiGVWRPsPPTCEKi   237  
C4BP_HUMAN_4  238  TCRK.PDVSHGemvsgf......GPIYNY.KDTIVFKCQKGFVLRG..sSVIHCDAd....SKWNPsPPACEPn   297  
C4BP_HUMAN_5  298  SCINlPDIPHAswetyprptk..EDVYVV.GTVLRYRCHPGYKPTTdepTTVICQKn....LRWTP.YQGCEAl   363  
C4BP_HUMAN_6  364  CCPE.PKLNNGeitqhrksrpanHCVYFY.GDEISFSCHE.TSRF.....SAICQGd....GTWSPrTPSCGD.   425  
C4BP_HUMAN_7  425  ICNFpPKIAHGhykq........SSSYSFfKEEIIYECDKGYILVG..qAKLSCSY.....SHWSApAPQCKA.   483  
C4BP_HUMAN_8  483  LCRK.PELVNGrlsvd.......KDQYVE.PENVTIQCDSGYGVVG..pQSITCSGn....RTWYPeVPKCEWe   541  
C4BP_RAT_1     14  KCGPpPDLPYAlpasemn.....QTDFES.HTTLRYNCRPGYSRAS.ssQSLYCKPl....GKWQI.NIACVKk    75  
C4BP_RAT_2     76  SCRNpGDLQNGkvev........KTDFLF.GSQIEFSCSEGYILIG..sSTSYCEIqg.kgVSWSDpLPECVIa   137  
C4BP_RAT_3    138  KCGMpPDISNGkhngre......EEFFTY.RSSVTYKCDPDFTLLG..nASITCTVvnktvGVWSPsPPTCERi   202  
C4BP_RAT_4    203  ICPW.PKVLHGtinsgf......KHTYKY.KDSVRFVCQKGFVLRG..sGVIHCEAd....GSWSP.VPVCELn   261  
C4BP_RAT_5    262  SCTDiPDIPNAalitsprprk..EDVYPV.GTVLRYICRPGYEPATrqpMTVICQKd....LSWSM.LRGCKEi   327  
C4BP_RAT_6    328  CCPV.PDPKSVrviqhekahpdnDCTYFF.GDEVSYTCQNDIMLT......ATCKSd....GTWHPrTPSCHQ.   389  
C4BP_RAT_7    389  SCDFpPAIAHGrytk........SSSYYV.RTQVTYECEEGYRLVG..eATISCWY.....SQWTPaAPQCKA.   446  
C4BP_RAT_8    446  LCRK.PEIGNGvlstn.......KDQYVE.TENVTIQCDSGFVMLG..sQSITCSEn....GTWYPkVSRCEQe   504  

Key

alpha helix         RED
beta strand         GREEN
core blocks         UNDERSCORE
repeat              **********
Multiple alignment of the complete sequences
You can also look at the alignment in RSF format, or MSF format
You can also get the unaligned sequences in FASTA format
Back to Schema

Back to Index