sushi_6_ref6 - reference 1

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Multiple alignment of complete sequences
Name                SUSHI
Number of sequences 3


Key

alpha helix         RED
beta strand         GREEN
core blocks         UNDERSCORE
repeat              **********


                   *************************************************************************
CR2_HUMAN_1    22  SCGSpPPILNGrisyy..STPIAVGTVIRYSCSG......TFRLIGeKSLLCITkdkvdGTWDKp.APKCEYf    85  
CR2_HUMAN_2    90  SCPE.PIVPGGykirg..STPYRHGDSVTFACKT......NFSMNGnKSVWCQAn....NMWGPtrLPTCVSv   149  
CR2_HUMAN_3   153  ECPAlPMIHNGhhtsen.VGSIAPGLSVTYSCES......GYLLVGeKIINCLSs....GKWSAv.PPTCEEa   213  
CR2_HUMAN_4   214  RCKSlGRFPNGkvke...PPILRVGVTANFFCDE......GYRLQGpPSSRCVIag.qgVAWTK..MPVCEEi   274  
CR2_HUMAN_5   275  FCPSpPPILNGrhigns.LANVSYGSIVTYTCDPdpeegvNFILIGeSTLRCTVdsqktGTWSGp.APRCELs   345  
CR2_HUMAN_6   350  QCPH.PQILRGrmvsgq.KDRYTYNDTVIFACMF......GFTLKGsKQIRCNAq....GTWEPs.APVCEK.   409  
CR2_HUMAN_7   409  ECQApPNILNGqkedrh.MVRFDPGTSIKYSCNP......GYVLVGeESIQCTSe....GVWTPp.VPQCKVa   469  
CR2_HUMAN_8   470  ACEAtGRQLLTk......PQHQFVRPDVNSSCGE......GYKLSGsVYQECQGt....IPWFMe.IRLCKEi   525  
CR2_HUMAN_9   526  TCPPpPVIYNGahtgss.LEDFPYGTTVTYTCNPgpergvEFSLIGeSTIRCTSndqerGTWSGp.APLCKLs   596  
CR2_HUMAN_10  601  QCSH.VHIANGykisgk.EAPYFYNDTVTFKCYS......GFTLKGsSQIRCKAd....NTWDPe.IPVCEKe   660  
CR2_HUMAN_11  661  TCQH.VRQSLQe......LPAGSRVELVNTSCQD......GYQLTGhAYQMCQDae..nGIWFKk.IPLCKVi   717  
CR2_HUMAN_12  718  HCHPpPVIVNGkhtgmm.AENFLYGNEVSYECDQ......GFYLLGeKKLQCRSdskghGSWSGp.SPQCLRs   782  
CR2_HUMAN_13  787  RCPN.PEVKHGyklnkt.HSAYSHNDIVYVDCNP......GFIMNGsRVIRCHTd....NTWVPg.VPTCIKk   846  
CR2_HUMAN_14  850  GCPPpPKTPNGnhtggn.IARFSPGMSILYSCDQ......GYLLVGeALLLCTHe....GTWSQp.APHCKEv   910  
CR2_HUMAN_15  911  NCSS.PADMDGiqkglepRKMYQYGAVVTLECED......GYMLEGsPQSQCQSd....HQWNPp.LAVCRSr   971  
CR2_MOUSE_1    13  SCDPpPEVKNArkpyy..SLPIVPGTVLRYTCSP......SYRLIGeKAIFCISenqvhATWDKa.PPICESv    76  
CR2_MOUSE_2    81  SCSD.PIVPGGfmnkgs.KAPFRHGDSVTFTCKA......NFTMKGsKTVWCQAn....EMWGPtaLPVCESd   141  
CR2_MOUSE_3   145  ECPSlPTIHNGhhtgqh.VDQFVAGLSVTYSCEP......GYLLTGkKTIKCLSs....GDWDGv.IPTCKEa   205  
CR2_MOUSE_4   206  QCEHpGKFPNGqvke...PLSLQVGTTVYFSCNE......GYQLQGqPSSQCVIve.qkAIWTK..KPVCKEi   266  
CR2_MOUSE_5   267  LCPPpPPVRNGshtgsf.SENVPYGSTVTYTCDPspekgvSFTLIGeKTINCTTgsqktGIWSGp.APYCVLs   337  
CR2_MOUSE_6   342  LCLQ.PKIKRGqilsil.KDSYSYNDTVAFSCEP......GFTLKGnRSIRCNAh....GTWEPp.VPVCEK.   401  
CR2_MOUSE_7   401  GCQApPKIINGqkedsy.LLNFDPGTSIRYSCDP......GYLLVGeDTIHCTPe....GKWTPi.TPQCTVa   461  
CR2_MOUSE_8   462  ECKPvGPHLFKr......PQNQFIRTAVNSSCDE......GFQLSEsAYQLCQGt....IPWFIe.IRLCKEi   517  
CR2_MOUSE_9   518  TCPPpPVIHNGthtwss.SEDVPYGTVVTYMCYPgpeegvKFKLIGeQTIHCTSdsrgrGSWSSp.APLCKLs   588  
CR2_MOUSE_10  593  QCTD.VHVENGvkltdn.KAPYFYNDSVMFKCDD......GYILSGsSQIRCKAn....NTWDPe.KPLCKKe   652  
CR2_MOUSE_11  653  GCE..PMRVHG.......LPDDSHIKLVKRTCQN......GYQLTGyTYEKCQNae..nGTWFKk.IEVCTVi   707  
CR2_MOUSE_12  708  LCQPpPKIANGghtgmm.AKHFLYGNEVSYECDE......GFYLLGeKSLQCVNdskghGSWSGp.PPQCLQs   772  
CR2_MOUSE_13  777  HCPD.PEVKHGyklnkt.HSAFSHNDIVHFVCNQ......GFIMNGsHLIRCHTn....NTWLPg.VPTCIRk   836  
CR2_MOUSE_14  840  GCQSpSTIPNGnhtggs.IARFPPGMSVMYSCYQ......GFLMAGeARLICTHe....GTWSQp.PPFCKEv   900  
CR2_MOUSE_15  901  NCSF.PEDTNGiqkgfqpGKTYRFGATVTLECED......GYTLEGsPQSQCQDd....SQWNPp.LALCKYr   961  
O46545_1       31  FCDPpPSIKNGrsgyh..SGPVALNAVVTYSCAS......AFRLIGeRRLFCISkdnvnGIWDKa.PPICEYy    94  
O46545_2       99  VCSE.PIIPGGyrtkts.RPPFRHGDAVTFSCNA......NFTMKGnKTVWCQAn....RKWGPtpLPICESd   159  
O46545_3      163  ECPSlPTIANGhhtges.VASFAPGLTVTYSCEP......GYLLLGeNTIHCLSs....GDWSAv.APTCKEa   223  
O46545_4      224  QCEPpRSFLNGqikr...PTSFGVGATVNFSCNE......GYRLQGpLSSRCVIve.qrTFWTK..MPACEEi   284  
O46545_5      285  LCPSpPPILNGrhtgts.SVIFRYGRTVSYTCDPgpekgvNFILVGeRTIRCTTdsqktGTWSGp.APRCELs   355  
O46545_6      360  RCPP.PQIPRGqissgq.RDQYSYNDTVVFACIF......GFTMKGsRAVRCNAq....GTWEPs.VPVCEK.   419  
O46545_7      419  DCQApPKILNGqkedrh.RVRFDPGTSIRYSCDP......GYVLVGeESIRCTPd....GVWIPt.APICKAa   479  
O46545_8      480  ECEPvGKQVFKk......PKNQFIRPDVNSSCDE......GYRLGEsVYQQCRGt....FPWFMe.IRLCKDi   535  
O46545_9      536  TCPPpPAIYNGvhtgss.SEDVLYGTTVTYTCYPgpergvKYNLIGeSTIRCISndqgtGIWSGp.APLCKLs   606  
O46545_10     611  QCSH.VRIENGykisgk.EAPYFYNDSVVFKCDD......GFILRGsSQVRCKAn....NTWDPe.IPVCEKe   670  
O46545_11     672  QCQP.LGEDVQk......PPVGSPVVPANTSCQD......GYRMKNyIYQKCQDde..nRVWFQk.IPVCEIi   728  
O46545_12     729  NCKDpPRINNGkhrgvl.PGGFRYGNEVSYECDQ......GFDLLGeKSIRCIIdsqgnGSWSGp.APQCIKs   793  
O46545_13     798  HCPN.PEVMHGhklnkt.YSSYSHNDILHIACNP......GFVMNGsHLIRCHTn....NKWVPg.VPTCIKk   857  
O46545_14     861  GCQRpFTISHGnhtggd.ITRFSPGMSIMYSCNQ......GYLLVGeALLLCTHe....GTWNRp.APYCKEv   921  
O46545_15     922  NCSF.PEHLNGiqnglepGRMYQYGAVVTLACED......GYTLEGsPQSQCQEd....HRWNPp.LAVCKSp   982  

Key

alpha helix         RED
beta strand         GREEN
core blocks         UNDERSCORE
repeat              **********
Multiple alignment of the complete sequences
You can also look at the alignment in RSF format, or MSF format
You can also get the unaligned sequences in FASTA format
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