sushi_6_ref6 - reference 6
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Multiple alignment of complete sequences
Multiple alignment of repeats only
Number of sequences              3
Key:
| A | SUSHI repeat - type A | 
| B | SUSHI repeat - type B | 
| C | SUSHI repeat - type C | 
| D | SUSHI repeat - type D | 
| E | SUSHI repeat - type E | 
| F | SUSHI repeat - type F | 
| G | SUSHI repeat - type G | 
| H | SUSHI repeat - type H | 
| U | SUSHI repeat - type unknown | 
Sequence Name  |    # Repeats  | 
 |  |  |  22     |     85  |  | 
 90     |    149  |  | 
 153    |    213  |  | 
 214    |    274  |  | 
 275    |    345  |  | 
 350    |    409  |  | 
 409    |    469  |  | 
 470    |    525  |  | 
 526    |    596  |  | 
 601    |    660  |  | 
 661    |    717  |  | 
 718    |    782  |  | 
 787    |    846  |  | 
 850    |    910  |  | 
 911    |    971  |  | 
CR2_HUMAN  |      15     | 
  | 
B | 
  | 
B | 
  | 
B | 
  | 
B | 
  | 
B | 
  | 
B | 
  | 
B | 
  | 
D | 
  | 
B | 
  | 
B | 
  | 
D | 
  | 
B | 
  | 
B | 
  | 
B | 
  | 
B | 
  | 
 |  |  |  13     |     76  |  | 
 81     |    141  |  | 
 145    |    205  |  | 
 206    |    266  |  | 
 267    |    337  |  | 
 342    |    401  |  | 
 401    |    461  |  | 
 462    |    517  |  | 
 518    |    588  |  | 
 593    |    652  |  | 
 653    |    707  |  | 
 708    |    772  |  | 
 777    |    836  |  | 
 840    |    900  |  | 
 901    |    961  |  | 
CR2_MOUSE  |      15     | 
  | 
B | 
  | 
B | 
  | 
B | 
  | 
B | 
  | 
B | 
  | 
B | 
  | 
B | 
  | 
D | 
  | 
B | 
  | 
B | 
  | 
D | 
  | 
B | 
  | 
B | 
  | 
B | 
  | 
B | 
  | 
 |  |  |  31     |     94  |  | 
 99     |    159  |  | 
 163    |    223  |  | 
 224    |    284  |  | 
 285    |    355  |  | 
 360    |    419  |  | 
 419    |    479  |  | 
 480    |    535  |  | 
 536    |    606  |  | 
 611    |    670  |  | 
 672    |    728  |  | 
 729    |    793  |  | 
 798    |    857  |  | 
 861    |    921  |  | 
 922    |    982  |  | 
O46545  |      15     | 
  | 
B | 
  | 
B | 
  | 
B | 
  | 
B | 
  | 
B | 
  | 
B | 
  | 
B | 
  | 
D | 
  | 
B | 
  | 
B | 
  | 
D | 
  | 
B | 
  | 
B | 
  | 
B | 
  | 
B | 
  | 
Key:
| A | SUSHI repeat - type A | 
| B | SUSHI repeat - type B | 
| C | SUSHI repeat - type C | 
| D | SUSHI repeat - type D | 
| E | SUSHI repeat - type E | 
| F | SUSHI repeat - type F | 
| G | SUSHI repeat - type G | 
| H | SUSHI repeat - type H | 
| U | SUSHI repeat - type unknown | 
Multiple alignment of complete sequences
Multiple alignment of repeats only
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