zf_2_ref6 - reference 1

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Multiple alignment of complete sequences
Name                ZincFinger
Number of sequences 12


Key

alpha helix         RED
beta strand         GREEN
core blocks         UNDERSCORE
repeat              **********


                   ********************************
TF3A_HUMAN_1   96  rRFICsf.PDCSAN.YSKAWKLDAHLck...H   122  
TF3A_HUMAN_2  126  rPFVCdy.EGCGKA.FIRDYHLSRHIlt...H   152  
TF3A_HUMAN_3  156  kPFVCaa.NGCDQK.FNTKSNLKKHFerk..H   183  
TF3A_HUMAN_4  188  kQYICsf.EDCKKT.FKKHQQLKIHQcq...N   214  
TF3A_HUMAN_5  218  pLFKCtq.EGCGKH.FASPSKLKRHAka...H   244  
TF3A_HUMAN_6  245  eGYVCq..KGCSFV.AKTWTELLKHVret..H   271  
TF3A_HUMAN_7  273  eEILC...EVCRKT.FKRKDYLKQHMkt...H   297  
TF3A_HUMAN_8  302  dVCRCpr.EGCGRT.YTTVFNLQSHIlsf..H   329  
TF3A_HUMAN_9  333  rPFVCeh.AGCGKT.FAMKQSLTRHAvv...H   359  
TF3A_XENLA_1   33  kRYICsf.ADCGAA.YNKNWKLQAHLck...H    59  
TF3A_XENLA_2   63  kPFPCke.EGCEKG.FTSLHHLTRHSlt...H    89  
TF3A_XENLA_3   93  kNFTCds.DGCDLR.FTTKANMKKHFnrf..H   120  
TF3A_XENLA_4  125  cVYVChf.ENCGKA.FKKHNQLKVHQfs...H   151  
TF3A_XENLA_5  155  lPYECph.EGCDKR.FSLPSRLKRHEkv...H   181  
TF3A_XENLA_6  182  aGYPCkkdDSCSFV.GKTWTLYLKHVaec..H   210  
TF3A_XENLA_7  212  dLAVC...DVCNRK.FRHKDYLRDHQkt...H   236  
TF3A_XENLA_8  241  tVYLCpr.DGCDRS.YTTAFNLRSHIqsf..H   268  
TF3A_XENLA_9  272  rPFVCeh.AGCGKC.FAMKKSLERHSvv...H   298  
P43_XENBO_1    13  qVFRCpa.AGCKAV.YRKEGKLRDHMag...H    39  
P43_XENBO_2    43  kLWKCgk.KDCGKM.FARKRQIQKHMkr...H    69  
P43_XENBO_3    73  kKHSCpt.AGCKMT.FSTKKSLSRHKlyk..H   100  
P43_XENBO_4   104  vPLKCsv.PGCKRS.FRKKRALRIHVse...H   130  
P43_XENBO_5   134  pLSVCdv.PGCGWK.STSAAKLAAHHrr...H   160  
P43_XENBO_6   161  gGYRCsy.EDCQTV.SPTWTALQTHLkk...H   187  
P43_XENBO_7   189  lELQC...AACKKP.FKKASALRRHKat...H   213  
P43_XENBO_8   218  lQLPCpr.QDCDKI.FSTVFNLTHHLrkv..H   245  
P43_XENBO_9   249  qTHRCph.SNCTRS.FAMRESLVRHLvv...H   275  
TF3A_ICTPU_1   10  kNFVCsf.LNCKAS.FSKAWKLEAHYck...H    36  
TF3A_ICTPU_2   40  rPFAC...DRCDKT.FCTRCQLTRHNls...H    64  
TF3A_ICTPU_3   68  kPYQCle.DGCSES.FISTAGLKNHVerv..H    95  
TF3A_ICTPU_4  100  kHYVCdy.EGCAKE.FRKKKQLRSHKce...H   126  
TF3A_ICTPU_5  130  lPFECqy.EGCGKK.YTTSKKLQKHEkv...H   156  
TF3A_ICTPU_6  157  dVYPCae.EGCDFQ.GRMWTEYQAHRkaa..H   184  
TF3A_ICTPU_7  186  eALQC...DSCAKV.FHKAWFLKKHKlfv..H   211  
TF3A_ICTPU_8  216  rVFKCtk.EGCQKT.YTTHFNLQNHIlsf..H   243  
TF3A_ICTPU_9  247  rSFICph.DGCGKA.FAMEGSLKRHAvv...H   273  
TF3A_BUFAM_1   10  kRFICsf.PDCNAT.YNKNRKLQAHLck...H    36  
TF3A_BUFAM_2   40  rPFPCty.EGCEKG.FVTLHHLNRHVls...H    66  
TF3A_BUFAM_3   70  kPCKCet.ENCNLA.FTTASNMRLHFkra..H    97  
TF3A_BUFAM_4  102  qVYVCyf.ADCGQQ.FRKHNQLKIHQyi...H   128  
TF3A_BUFAM_5  132  qPFKCsh.EGCDKC.YASPSRLKRHEkt...H   158  
TF3A_BUFAM_6  159  aGYPCrkdSTCPFV.GKTWSDYMKHAael..H   187  
TF3A_BUFAM_7  188  sEVTC...SICNRT.FKRKSFLKEHKki...H   212  
TF3A_BUFAM_8  217  iVYRCpr.ENCDRT.YTTKFNLKSHIltf..H   244  
TF3A_BUFAM_9  248  rPFVCeh.EGCGKT.FAMKQSLDRHFnt...H   274  
TF3A_RANPI_1   11  kRYICsf.ADCSAS.YNKNWKLQAHLck...H    37  
TF3A_RANPI_2   41  rPFPCtv.EGCGKG.FVTLFHLTRHSmt...H    67  
TF3A_RANPI_3   71  kPCKCda.PDCDLS.FTTMTNLRKHYqra..H    98  
TF3A_RANPI_4  103  lIYECyf.ADCGQT.FKKHNQLKLHQyi...H   129  
TF3A_RANPI_5  133  qPFKCnh.EGCDKS.FSSPSRLKRHEkv...H   159  
TF3A_RANPI_6  160  aGYPCqkdSSCSFV.GKTWTEYMKHLaas..H   188  
TF3A_RANPI_7  190  ePTIC...DVCNRK.FKNKTHLKDHKrt...H   214  
TF3A_RANPI_8  219  vVYKCpr.DGCDRT.YTKKFGLQSHIlsf..H   246  
TF3A_RANPI_9  250  rPFACgh.PGCGKT.FAMKQSLDRHAnt...H   276  
TF3A_XENBO_1   11  kRYICsf.ADCGAS.YNKNWKLRAHLck...H    37  
TF3A_XENBO_2   41  kPFPCke.EGCDKG.FTSLHHLTRHSit...H    67  
TF3A_XENBO_3   71  kNFKCds.DKCDLT.FTTKANMKKHFnrf..H    98  
TF3A_XENBO_4  103  cVYVChf.EGCDKA.FKKHNQLKVHQft...H   129  
TF3A_XENBO_5  133  lPYKCph.EGCDKS.FSVPSCLKRHEkv...H   159  
TF3A_XENBO_6  160  aGYPCkkdDSCLFV.GKTWTLYLKHVkec..H   188  
TF3A_XENBO_7  190  ePVMC...DECKRT.FKHKDYLRNHKkt...H   214  
TF3A_XENBO_8  219  tVYCCpr.DGCERS.YTTEFNLQSHMqsf..H   246  
TF3A_XENBO_9  250  rPFACeh.AECGKS.FAMKKSLERHSvv...H   276  
TF3A_YEAST_1   47  kTYFCdy.DGCDKA.FTRPSILTEHQlsv..H    74  
TF3A_YEAST_2   78  rAFQC...DKCAKS.FVKKSHLERHLyt...H   102  
TF3A_YEAST_3  106  kPFQC...SYCGKG.VTTRQQLKRHEvt...H   130  
TF3A_YEAST_4  132  kSFICpe.EGCNLR.FYKHPQLRAHIlsv..H   159  
TF3A_YEAST_5  161  hKLTC...PHCNKS.FQRPYRLRNHIskh..H   186  
TF3A_YEAST_6  192  nPYQCtf.AGCCKE.FRIWSQLQSHIknd..H   219  
TF3A_YEAST_7  220  pKLKC...PICSKP.CVGENGLQMHMii...H   244  
TF3A_YEAST_8  251  kNWKC...HICPDMsFSRKHDLLTHYgsi..H   277  
TF3A_YEAST_9  363  rKYRCfy.NNCSRT.FKTKEKYEKHIdk...H   389  
Q9W7D7_1       14  qVFTCth.AGCGAC.FPREWKLKAHEtv...H    40  
Q9W7D7_2       44  rPCACpt.AGCGSL.FKRTSHLKRHVlq...H    70  
Q9W7D7_3       74  kGFQCkf.ANCAKS.FIDAQRLKKHQnsa..H   101  
Q9W7D7_4      104  hKFKCnq.PKCSLS.FKKRRLLKLHLke...H   130  
Q9W7D7_5      134  pNFKCsn.IRCTAT.FDSHIARKAHEkk...H   160  
Q9W7D7_6      161  aGYSCph.KDCQVV.EHTWSKLQRHLak...H   187  
Q9W7D7_7      189  vSFTC...GVCEKV.YDKAGALRRHKri...H   213  
Q9W7D7_8      218  pVLLCpr.ANCQAY.FTTTFNLEHHIrkv..H   245  
Q9W7D7_9      249  lKYKCff.PDCPRT.FVMRESMHRHMvh...H   275  
Q62065_1       32  gRYVC...MLCHKT.FKTGSILKAHMvt...H    56  
Q62065_2       60  kDHEC...KLCGAS.FRTKGSLIRHHrr...H    84  
Q62065_3       88  rPYKC...AKCGKS.FRESGALTRHLksltpC   115  
Q62065_4      273  rTHPC...PQCSET.FPTAATLEAHKrg...H   297  
Q62065_5      301  rPFTC...TQCGKA.FPKAYLLKNDQev...H   325  
Q62065_6      329  rRFRC...GDCGKL.YKTIAHVRGHRrv...H   353  
Q62065_7      357  rPFPC...PQCGKR.YKTKNAQQVHFrt...H   381  
Q62065_8      385  kPHVC...QFCSRG.FREKGSLVRHVrh...H   409  
Q62065_9      413  kPFKC...YKCGRG.FADDGTLNRHLrtkggC   440  
O75701_1      183  lPHSC...PDCGRN.FSYPSLLASHQrv...H   207  
O75701_2      211  rPFSC...GQCQAR.FSQRRYLLQHQfi...H   235  
O75701_3      239  kPYPC...PDCGRR.FRQRGSLAIHRra...H   263  
O75701_4      267  kPYAC...SDCKSR.FTYPYLLAIHQrk...H   291  
O75701_5      295  kPYSC...PDCSLR.FAYTSLLAIHRri...H   319  
O75701_6      323  kPYPC...PDCGRR.FTYSSLLLSHRri...H   347  
O75701_7      351  rPFPC...VECGKG.FKRKTALEAHRwi...H   375  
O75701_8      687  rRHVC...TDCGRR.FTYPSLLVSHRrm...H   711  
O75701_9      715  rPFPC...PECGMR.FKRKFAVEAHQwi...H   739  
ZF92_MOUSE_1  139  kRYLC...QQCGKS.FSRSFNLIKHRii...H   163  
ZF92_MOUSE_2  167  kPYEC...SECGKQ.FQRSLALLEHQri...H   191  
ZF92_MOUSE_3  195  kPYEC...GECGKT.FTRSSNLVKHQvi...H   219  
ZF92_MOUSE_4  223  mPFVC...RMCGKV.FRRSFALLEHTri...H   247  
ZF92_MOUSE_5  251  rPFEC...TECGKA.FSRSSNLIEHQri...H   275  
ZF92_MOUSE_6  279  kPYIC...KECGKA.FKGVSQVIHHQli...H   303  
ZF92_MOUSE_7  307  kPFTC...HEYGKA.FRGLSGLSQHQrv...H   331  
ZF92_MOUSE_8  335  kPYEC...SECGRA.FGRRANLFKHQvv...H   359  
ZF92_MOUSE_9  408  kPQVC...ERCGQV.FENKLLLCRHLri...H   432  

Key

alpha helix         RED
beta strand         GREEN
core blocks         UNDERSCORE
repeat              **********
Multiple alignment of the complete sequences
You can also look at the alignment in RSF format, or MSF format
You can also get the unaligned sequences in FASTA format
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