zf_2_ref6 - reference 6


 Back to Index 


Multiple alignment of complete sequences


Multiple alignment of repeats only

Number of sequences              12





Key:


AZincFinger repeat - type A


BZincFinger repeat - type B


CZincFinger repeat - type C


DZincFinger repeat - type D


EZincFinger repeat - type E


FZincFinger repeat - type F


GZincFinger repeat - type G


UZincFinger repeat - type unknown










Sequence Name
   # Repeats

 
96   
 
  122

 
126  
 
  152

 
156  
 
  183

 
188  
 
  214

 
218  
 
  244

 
245  
 
  271

 
273  
 
  297

 
302  
 
  329

 
333  
 
  359




TF3A_HUMAN
      9   


A

A

A

A

A

B

A

A

A





 
33   
 
   59

 
63   
 
   89

 
93   
 
  120

 
125  
 
  151

 
155  
 
  181

 
182  
 
  210

 
212  
 
  236

 
241  
 
  268

 
272  
 
  298




TF3A_XENLA
      9   


A

A

A

A

A

B

A

A

A





 
13   
 
   39

 
43   
 
   69

 
73   
 
  100

 
104  
 
  130

 
134  
 
  160

 
161  
 
  187

 
189  
 
  213

 
218  
 
  245

 
249  
 
  275




P43_XENBO
      9   


U

U

U

U

U

B

C

D

A





 
10   
 
   36

 
40   
 
   64

 
68   
 
   95

 
100  
 
  126

 
130  
 
  156

 
157  
 
  184

 
186  
 
  211

 
216  
 
  243

 
247  
 
  273




TF3A_ICTPU
      9   


A

A

A

A

A

B

U

A

A





 
10   
 
   36

 
40   
 
   66

 
70   
 
   97

 
102  
 
  128

 
132  
 
  158

 
159  
 
  187

 
188  
 
  212

 
217  
 
  244

 
248  
 
  274




TF3A_BUFAM
      9   


A

A

A

A

A

B

A

A

A





 
11   
 
   37

 
41   
 
   67

 
71   
 
   98

 
103  
 
  129

 
133  
 
  159

 
160  
 
  188

 
190  
 
  214

 
219  
 
  246

 
250  
 
  276




TF3A_RANPI
      9   


A

A

A

A

A

B

A

A

A





 
11   
 
   37

 
41   
 
   67

 
71   
 
   98

 
103  
 
  129

 
133  
 
  159

 
160  
 
  188

 
190  
 
  214

 
219  
 
  246

 
250  
 
  276




TF3A_XENBO
      9   


A

A

A

A

A

B

A

A

A





 
47   
 
   74

 
78   
 
  102

 
106  
 
  130

 
132  
 
  159

 
161  
 
  186

 
192  
 
  219

 
220  
 
  244

 
251  
 
  277

 
363  
 
  389




TF3A_YEAST
      9   


A

A

A

U

A

U

U

E

F





 
14   
 
   40

 
44   
 
   70

 
74   
 
  101

 
104  
 
  130

 
134  
 
  160

 
161  
 
  187

 
189  
 
  213

 
218  
 
  245

 
249  
 
  275




Q9W7D7
      9   


A

A

A

U

U

B

C

D

A





 
32   
 
   56

 
60   
 
   84

 
88   
 
  115

 
273  
 
  297

 
301  
 
  325

 
329  
 
  353

 
357  
 
  381

 
385  
 
  409

 
413  
 
  440




Q62065
      9   


U

A

A

U

A

A

A

A

A





 
183  
 
  207

 
211  
 
  235

 
239  
 
  263

 
267  
 
  291

 
295  
 
  319

 
323  
 
  347

 
351  
 
  375

 
687  
 
  711

 
715  
 
  739




O75701
      9   


A

A

A

A

A

A

A

A

A





 
139  
 
  163

 
167  
 
  191

 
195  
 
  219

 
223  
 
  247

 
251  
 
  275

 
279  
 
  303

 
307  
 
  331

 
335  
 
  359

 
408  
 
  432




ZF92_MOUSE
      9   


A

A

A

A

A

A

A

A

A










Key:


AZincFinger repeat - type A


BZincFinger repeat - type B


CZincFinger repeat - type C


DZincFinger repeat - type D


EZincFinger repeat - type E


FZincFinger repeat - type F


GZincFinger repeat - type G


UZincFinger repeat - type unknown







Multiple alignment of complete sequences
Multiple alignment of repeats only



 Back to Index