Name APO
Number of sequences 6
Key
alpha helix RED
beta strand GREEN
core blocks UNDERSCORE
repeat **********
**********************
APA1_SPAAU_1 64 ..mkfaa...lalalllavgsha.............asmqadap..sq.ldh.....aravldvyltqvkdmslravnq..lddpqy.aefktNLAQRIEEMYTQIKTLQGSVs.........................................................................
APA1_SPAAU_2 86 ............................................................................................pMTDSFYNTVMEVTKDTRESLnvdlealkssla..............................................................
APA1_SPAAU_3 119 ............................................................................................pQNEQLKQVIEKHLNDYRTLLt.........................................................................
APA1_SPAAU_4 141 ............................................................................................pIYNDYKTKHDEEMAALKTRLe.........................................................................
APA1_SPAAU_5 163 ............................................................................................pVMEELRTKIQANVEETKAVLm.........................................................................
APA1_SPAAU_6 185 ............................................................................................pMVETVRTKVTERLESLREVVq.........................................................................
APA1_SPAAU_7 207 ............................................................................................pYVQEYKEQMKQMY.DQAQTVd..tdalrtkit..............................................................
APA1_SPAAU_8 237 ............................................................................................pLVEEIKVKMNAIFEIIAASVt..................ks.....................................................
APA4_PIG_1 60 mflkavv...lslalvavtgara......................evn.adq.....vatvmwdyfsqlgsnakkaveh..lqkseltqqlntLFQDKLGEVNTYTEDLQKKLv.........................................................................
APA4_PIG_2 82 ............................................................................................pFATELHERLTKDSEKLKEEIrreleelrarll..............................................................
APA4_PIG_3 115 ............................................................................................pHATEVSQKIGDNVRELQQRLg.........................................................................
APA4_PIG_4 137 ............................................................................................pFTGGLRTQVNTQVQQLQRQLk.........................................................................
APA4_PIG_5 159 ............................................................................................pYAERMESVLRQNIRNLEASVa.........................................................................
APA4_PIG_6 181 ............................................................................................pYADEFKAKIDQNVEELKGSLt.........................................................................
APA4_PIG_7 203 ............................................................................................pYAEELKAKIDQNVEELRRSLa.........................................................................
APA4_PIG_8 225 ............................................................................................pYAQDVQEKLNHQLEGLAFQMk.........................................................................
APA4_PIG_9 247 ............................................................................................kQAEELKAKISANADELRQKLvpvaenvhghlkgnteglq.......................................................
APA4_PIG_10 287 ............................................................................................kSLLELRSHLDQQVEEFRLKVe.........................................................................
APA4_PIG_11 309 ............................................................................................pYGETFNKALVQQVEDLRQKLg.........................................................................
APA4_PIG_12 331 ............................................................................................pLAGDVEGHLSFLEKDLRDKVn.........................................................................
APA4_PIG_13 353 ............................................................................................tFFSTLKEEASQGQSQALPAQe..................kaqapleg...............................................
APE_CAVPO_1 74 ..mkvlw...aalvvtllagcradvep......evevrepavwqsgqp.wel.....alsrfwdylrwvqtlsdqvqee..llsnqvtqeltlLIEDTMKEVKAYKAELEKELg.........................................................................
APE_CAVPO_2 96 ............................................................................................pVAEDTKARLAKELQAAQARLgadmeevrnrls..............................................................
APE_CAVPO_3 129 ............................................................................................qYRSEVQAMLGQSSEELRARLt.........................................................................
APE_CAVPO_4 151 ............................................................................................sHPRKMKRRLQRDIDELQKRMa.........................................................................
APE_CAVPO_5 173 ............................................................................................vYKAGAQEGAERGVSAIRERLg.........................................................................
APE_CAVPO_6 195 ............................................................................................sLIEQG.....RLQALASQPLq.........................................................................
APE_CAVPO_7 212 ............................................................................................eRAQAWGEQMRGRLEKVGSQAr.........................................................................
APE_CAVPO_8 234 ............................................................................................dRLEEVREQMEEVRVKVEEQAe.......afqarlkswfe.......................................................
APE_CAVPO_9 267 ............................................................................................pMMEDMRRQWAELIQKVQVAVg..................astsapsqep.............................................
Q28857-F_1 4 .........................................................................................rvepYGENFNKALVQQMEQLRTKLg.........................................................................
Q28857-F_2 26 ............................................................................................pHAGDVEGHLSFLEKDLRDKVn.........................................................................
Q28857-F_3 48 ............................................................................................sFFSTFKEKESQDKTLSLPELe..................qqqeqqqeqqq.................................eqvqmlaples
Q9UBJ3_1 52 ..........maavltwalalls......................afs.atq.....arkgfwdyfsqt.sgdkgrveq..ihqqkmarepatLKDSLEQDLNNMNKFLEKLR..........................................................................
Q9UBJ3_2 73 ............................................................................................pLSGSEAPRLPQDPVGMRRQLqeeleevkarlq..............................................................
Q9UBJ3_3 106 ............................................................................................pYMAEAHELVGWNLEGLRQQLk.........................................................................
Q9UBJ3_4 128 ............................................................................................pYTMDLMEQVALRVQELQEQLr.........................................................................
Q9UBJ3_5 150 ............................................................................................vVGEDTKAQLLGGVDEAW.............................................................................
Q9UBJ3_6 168 ............................................................................................aLLQGLQSRVVHHTGRFKELFh.........................................................................
Q9UBJ3_7 190 ............................................................................................pYAESLVSGIGRHVQELHRSVa.........................................................................
Q9UBJ3_8 212 ............................................................................................pHAPASPARLSRCVQVLSRKLt.........................................................................
Q9UBJ3_9 234 ............................................................................................lKAKALHARIQQNLDQLREELs.....rafagtgteegag.......................................................
Q9UBJ3_10 269 ............................................................................................pDPQMLSEEVRQRLQAFRQDTy.........................................................................
Q9UBJ3_11 291 ............................................................................................lQIAAFTRAIDQETEEVQQQLa.........................................................................
Q9UBJ3_12 313 ............................................................................................pPPPGHSAFAPEFQQTDSGKVl.........................................................................
Q9UBJ3_13 335 ............................................................................................sKLQARLDDLWEDITHSLHDQg..................hshlgdp................................................
ape_mouse_1 72 ..mkalw...avllvtlltgclaeg........epevtdqlewqsnqp.weq.....alnrfwdylrwvqtlsdqvqee..lqssqvtqeltaLMEDTMTEVKAYKKELEEQLg.........................................................................
ape_mouse_2 94 ............................................................................................pVAEETRARLGKEVQAAQARLgadmedlrnrlg..............................................................
ape_mouse_3 127 ............................................................................................qYRNEVHTMLGQSTEEIRARLs.........................................................................
ape_mouse_4 149 ............................................................................................tHLRKMRKRLMRDAEDLQKRLa.........................................................................
ape_mouse_5 171 ............................................................................................vYKAGAREGAERGVSAIRERLg.........................................................................
ape_mouse_6 193 ............................................................................................pLVEQGRQRTANLGAGAAQPLr.........................................................................
ape_mouse_7 215 ............................................................................................dRAQAFGDRIRGRLEEVGNQAr.........................................................................
ape_mouse_8 237 ............................................................................................dRLEEVREHMEEVRSKMEEQTqqirlqaeifqarlkgwfe.......................................................
ape_mouse_9 277 ............................................................................................pIVEDMHRQWANLMEKIQASVa..................tnpiitpvaqenq..........................................
Key
alpha helix RED
beta strand GREEN
core blocks UNDERSCORE
repeat **********
Multiple alignment of repeats only
You can also look at the alignment in RSF format, or MSF format
You can also get the unaligned sequences in FASTA format
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