faa_3_ref6 - reference 1

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Multiple alignment of complete sequences
Name                FAA
Number of sequences 9


Key

alpha helix         RED
beta strand         GREEN
core blocks         UNDERSCORE
repeat              **********


                 ***********************************************************************************************************************************************************************************************************************************************************************************************
Q46978_1      3  gtIFAVALNHRSQLDawqeafqqspyk....appKTAVWFIKPRNTVIGCGEPIPFPQGE.........................kVLSGATVALIVg....ktatkvreed.AAEYIAGYALANDVSLPEe......sfyrpaIKAKCrdgfcpigETVAls...............................nvdnLTIYTEINGr...padhwntadLQRNAAQLLSALSefat.lnpGDAILLGTPQArv.............eiqpGDRVRVLAEGfpplen   201  
Q46978_2    223  gtLFALGLNYADHASelef............kppEEPLVFLKAPNTLTGDNQTSVRPNNI........................eyMHYEAELVVVIg....kqarnvsead.AMDYVAGYTVCNDYAIRDyle....nyyrpnLRVKSrdgltpmlSTIVpkeaip...........................dphnLTLRTFVNGe...lrqqgttadLIFSVPFLIAYLSefmt.lnpGDMIATGTPKGls.............dvvpGDEVVVEVEGvgrlvn   420  
Q9RPU5_1      3  gtVFAVALNHRSQLDawqeafsqppyn....appKTAVWFIKPRNTVIRHGEPILYPQGE.........................kVLSGATVALIVg....ktasrkrsea.AAEYIAGYALANEVSLPEe......sfyrpaIKAKCrdgfcplgEMAPls...............................dvdnLTIITEINGr...eadhwntadLQRSAAQLLSALSefat.lnpGDAILLGTPQNrv.............alrpGDRVRILAKGlpalen   201  
Q9RPU5_2    223  gtLFALGLNYADHASelaf............tppKEPLVFIKAPNTFTEHHQTSVRPNNV........................eyMHYEAELVVVIg....ktarkvseae.AMEYVAGYTVCNDYAIRDyle....nyyrpnLRVKSrdgltpigPWIVdkeavs...........................dphnLTLRTFVNGe...lrqegttadLIFSIPFLISYLSefmt.lqpGDMIATGTPKGls.............dvvpGDEVVLEIKGvgrlvn   420  
q00770      128  igDYTDFYAGLNHAYnvgvlfrgpdn.alqpnykHLPVAYHGRASSVVTSGTPLHRPQGQiltnpaanp.......klptfspckkLDIELELAFFVs.tpndlghpvhidk.AEDHIFGVVLMNDWSARDiqawe..yvplgpFNAKNf..gttitPWVVlidalepfrtvglepgnresllpylrekradtaydipLEVEVTNAGgeptvisrsnaknLLYSFPQMLAHHTitgcnlntGDLLGSGTISGke.............nqteGSFLEQT.NGknpikl   386  
O30145      104  pkLMVDFSTFEEHVR.mgfeklgm...sipqewyQVPVGYKMNPYSVIGPEEPVIWPSFT........................qiLDYELEFGIVVg....krgknvsked.AMDYVLGYTIVNDISARDmefielkamplgpLKSKDfdnatpmgPCIVtkdeik...........................dphnLKMVARVNGe...vwseastkdMHWKIPDLIAHLSkdqt.ihpGTVMLSGTPGGgc.......gmhvgkllkpGDVVELEIEGigvlrn   319  
O86346       71  ppSIRDSLCFLDHMRncqeamgggr..vlmdtwyRIPAFYFACPSTVLGPYDDAPTAPGS........................awQDFELEIAAVIg....tsgkdltveq.AERSIIGYTIFNDWSARDlqmle.gqlrigqAKGKDs..gitlgPYLVtpdelepycrg......................gklsLRVIALVNGt...vigsgstaqMDWSFGEVIAYASrgvt.ltpGDVFGSGTVPTctlvehlrppesfpgwlhdGDVVTLQVEGlgetrq   297  
o86042        1  ................mgrpvdk.........svEQAFYFTKSPQTLVESGATVAYPPRT........................snYHYEMELVLAIg....kpgfrvsedq.AHELIYGYAAGLDMTRRDlqlva.rdkgrpwDTGKDieegsvcsEIVPmqgv.............................vveqGAIALEVNGq...tkqssnvdkLIWNVREIIADLStyyh.lqpGDLIYTGTPEGvg.............avvaGDKIIGRVEGiaeisl   186  
q9x4x5       68  arVFGVGLNYLSHLQhlgs............tapEHPLGYIKPESALVGASDDIQYPALT........................aqLDYEVELVAVI.......aralgdepcASACLLGYTCGNDISARDagkrig...rldlLTQKAmdrttpvgPWVVtldeigv..........................gqphLDIELSVNDe...crqfdntrqMLFPIDELLNYVDarit.lqpGDLVFTGSTHGvg.......ledgr.flqpGDRVEVRIEGigsmsn   270  
ynq8_yeast   10  rkIICIGRNYAAHIKelnn............stpKQPFFFLKPTSSIVTPLSSSLVKTTRpanstfnglnedgtnpgpifiprgvkVHHEIELALIVskhl.snvtkmkpee.VYDSISGVALALDLTARNvqdea.kkkglpwTISKGfdtfmpisAIVSrekfssyksn.......................lqdiFRVKCSVNGq...lrqdggtnlMLHPLHKILQHIStmis.lepGDIILTGTPAGvg.............elkpGDRVHCELLQnndniv   241  
o28058       44  skIIAVGLNYIDHAEelnm............pvpEEPILFMKPSTAVIGHDDCIILPQIS........................qrVDYEGELAVVIa....edcrnvpetn.AADYILGYTCFNDVTARDlq.....akdgqwTRAKSfdtfaplgPYIAeid..............................dpskLGIQTRVNGk...vvqksntsnLIFDVFQLVSFVSsvmt.lkaGDVIATGTPAGvg.............mlkdGDVVEVEIEKigilrn   237  

Key

alpha helix         RED
beta strand         GREEN
core blocks         UNDERSCORE
repeat              **********
Multiple alignment of the complete sequences
You can also look at the alignment in RSF format, or MSF format
You can also get the unaligned sequences in FASTA format
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