kringle_1_ref6 - reference 1

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Multiple alignment of complete sequences
Name                KRINGLE
Number of sequences 8


Key

alpha helix         RED
beta strand         GREEN
core blocks         UNDERSCORE
repeat              **********


                      **************************************************************************************
UROK_HUMAN        69  TCYEGNGHFYRGKASTDTMGRPCLPWNSATVLQQ.TYHAHRSDALQLGLGKHNYCRNPDNR.RRPWCYVQVGLKPLVQECM.VHDC   151  
APOA_HUMAN_01     27  DCYHGDGQSYRGTYSTTVTGRTCQAWSSMTPHQH.NRTTENYP..NAGL.IMNYCRNPDAV.AAPYCYTRD.PGVRWEYCN.LTQC   105  
APOA_HUMAN_02    141  ECYHGNGQSYRGTYSTTVTGRTCQAWSSMTPHSH.SRTPEYYP..NAGL.IMNYCRNPDAV.AAPYCYTRD.PGVRWEYCN.LTQC   219  
APOA_HUMAN_03    255  ECYHGNGQSYRGTYSTTVTGRTCQAWSSMTPHSH.SRTPEYYP..NAGL.IMNYCRNPDAV.AAPYCYTRD.PGVRWEYCN.LTQC   333  
APOA_HUMAN_04    369  ECYHGNGQSYRGTYSTTVTGRTCQAWSSMTPHSH.SRTPEYYP..NAGL.IMNYCRNPDAV.AAPYCYTRD.PGVRWEYCN.LTQC   447  
APOA_HUMAN_05    483  ECYHGNGQSYRGTYSTTVTGRTCQAWSSMTPHSH.SRTPEYYP..NAGL.IMNYCRNPDAV.AAPYCYTRD.PGVRWEYCN.LTQC   561  
APOA_HUMAN_06    597  ECYHGNGQSYRGTYSTTVTGRTCQAWSSMTPHSH.SRTPEYYP..NAGL.IMNYCRNPDAV.AAPYCYTRD.PGVRWEYCN.LTQC   675  
APOA_HUMAN_07    711  ECYHGNGQSYRGTYSTTVTGRTCQAWSSMTPHSH.SRTPEYYP..NAGL.IMNYCRNPDAV.AAPYCYTRD.PGVRWEYCN.LTQC   789  
APOA_HUMAN_08    825  ECYHGNGQSYRGTYSTTVTGRTCQAWSSMTPHSH.SRTPEYYP..NAGL.IMNYCRNPDAV.AAPYCYTRD.PGVRWEYCN.LTQC   903  
APOA_HUMAN_09    939  ECYHGNGQSYRGTYSTTVTGRTCQAWSSMTPHSH.SRTPEYYP..NAGL.IMNYCRNPDAV.AAPYCYTRD.PGVRWEYCN.LTQC  1017  
APOA_HUMAN_10   1053  ECYHGNGQSYRGTYSTTVTGRTCQAWSSMTPHSH.SRTPEYYP..NAGL.IMNYCRNPDAV.AAPYCYTRD.PGVRWEYCN.LTQC  1131  
APOA_HUMAN_11   1167  ECYHGNGQSYRGTYSTTVTGRTCQAWSSMTPHSH.SRTPEYYP..NAGL.IMNYCRNPDAV.AAPYCYTRD.PGVRWEYCN.LTQC  1245  
APOA_HUMAN_12   1281  ECYHGNGQSYRGTYSTTVTGRTCQAWSSMTPHSH.SRTPEYYP..NAGL.IMNYCRNPDAV.AAPYCYTRD.PGVRWEYCN.LTQC  1359  
APOA_HUMAN_13   1395  ECYHGNGQSYRGTYSTTVTGRTCQAWSSMTPHSH.SRTPEYYP..NAGL.IMNYCRNPDAV.AAPYCYTRD.PGVRWEYCN.LTQC  1473  
APOA_HUMAN_14   1509  ECYHGNGQSYRGTYSTTVTGRTCQAWSSMTPHSH.SRTPEYYP..NAGL.IMNYCRNPDAV.AAPYCYTRD.PGVRWEYCN.LTQC  1587  
APOA_HUMAN_15   1623  ECYHGNGQSYRGTYSTTVTGRTCQAWSSMTPHSH.SRTPEYYP..NAGL.IMNYCRNPDAV.AAPYCYTRD.PGVRWEYCN.LTQC  1701  
APOA_HUMAN_16   1737  ECYHGNGQSYRGTYSTTVTGRTCQAWSSMTPHSH.SRTPEYYP..NAGL.IMNYCRNPDAV.AAPYCYTRD.PGVRWEYCN.LTQC  1815  
APOA_HUMAN_17   1851  ECYHGNGQSYRGTYSTTVTGRTCQAWSSMTPHSH.SRTPEYYP..NAGL.IMNYCRNPDAV.AAPYCYTRD.PGVRWEYCN.LTQC  1929  
APOA_HUMAN_18   1965  ECYHGNGQSYRGTYSTTVTGRTCQAWSSMTPHSH.SRTPEYYP..NAGL.IMNYCRNPDAV.AAPYCYTRD.PGVRWEYCN.LTQC  2043  
APOA_HUMAN_19   2079  ECYHGNGQSYRGTYSTTVTGRTCQAWSSMTPHSH.SRTPEYYP..NAGL.IMNYCRNPDAV.AAPYCYTRD.PGVRWEYCN.LTQC  2157  
APOA_HUMAN_20   2193  ECYHGNGQSYRGTYSTTVTGRTCQAWSSMTPHSH.SRTPEYYP..NAGL.IMNYCRNPDAV.AAPYCYTRD.PGVRWEYCN.LTQC  2271  
APOA_HUMAN_21   2307  ECYHGNGQSYRGTYSTTVTGRTCQAWSSMTPHSH.SRTPEYYP..NAGL.IMNYCRNPDAV.AAPYCYTRD.PGVRWEYCN.LTQC  2385  
APOA_HUMAN_22   2421  ECYHGNGQSYRGTYSTTVTGRTCQAWSSMTPHSH.SRTPEYYP..NAGL.IMNYCRNPDAV.AAPYCYTRD.PGVRWEYCN.LTQC  2499  
APOA_HUMAN_23   2535  ECYHGNGQSYRGTYSTTVTGRTCQAWSSMTPHSH.SRTPEYYP..NAGL.IMNYCRNPDAV.AAPYCYTRD.PGVRWEYCN.LTQC  2613  
APOA_HUMAN_24   2649  ECYHGNGQSYRGTYSTTVTGRTCQAWSSMTPHSH.SRTPEYYP..NAGL.IMNYCRNPDAV.AAPYCYTRD.PGVRWEYCN.LTQC  2727  
APOA_HUMAN_25   2763  ECYHGNGQSYRGTYSTTVTGRTCQAWSSMTPHSH.SRTPEYYP..NAGL.IMNYCRNPDAV.AAPYCYTRD.PGVRWEYCN.LTQC  2841  
APOA_HUMAN_26   2877  ECYHGNGQSYRGTYSTTVTGRTCQAWSSMTPHSH.SRTPEYYP..NAGL.IMNYCRNPDAV.AAPYCYTRD.PGVRWEYCN.LTQC  2955  
APOA_HUMAN_27   2991  ECYHGNGQSYRGTYSTTVTGRTCQAWSSMTPHSH.SRTPEYYP..NAGL.IMNYCRNPDAV.AAPYCYTRD.PGVRWEYCN.LTQC  3069  
APOA_HUMAN_28   3105  ECYHGNGQSYRGTYSTTVTGRTCQAWSSMTPHSH.SRTPEYYP..NAGL.IMNYCRNPDAV.AAPYCYTRD.PGVRWEYCN.LTQC  3183  
APOA_HUMAN_29   3219  ECYHGNGQSYRGTYSTTVTGRTCQAWSSMTPHSH.SRTPEYYP..NAGL.IMNYCRNPDAV.AAPYCYTRD.PGVRWEYCN.LTQC  3297  
APOA_HUMAN_30   3333  ECYHGNGQSYRGTYSTTVTGRTCQAWSSMTPHSH.SRTPEYYP..NAGL.IMNYCRNPDPV.AAPYCYTRD.PSVRWEYCN.LTQC  3411  
APOA_HUMAN_31   3447  ECYHGNGQSYQGTYFITVTGRTCQAWSSMTPHSH.SRTPAYYP..NAGL.IKNYCRNPDPV.AAPWCYTTD.PSVRWEYCN.LTRC  3525  
APOA_HUMAN_32   3561  DCYYHYGQSYRGTYSTTVTGRTCQAWSSMTPHQH.SRTPENYP..NAGL.TRNYCRNPDAE.IRPWCYTMD.PSVRWEYCN.LTQC  3639  
APOA_HUMAN_33   3675  DCYHGDGQSYRGSFSTTVTGRTCQSWSSMTPHWH.QRTTEYYP..NGGL.TRNYCRNPDAE.ISPWCYTMD.PNVRWEYCN.LTQC  3753  
APOA_HUMAN_34   3781  DCYHGDGQSYRGSFSTTVTGRTCQSWSSMTPHWH.QRTTEYYP..NGGL.TRNYCRNPDAE.IRPWCYTMD.PSVRWEYCN.LTQC  3859  
APOA_HUMAN_35   3895  DCYRGDGQSYRGTLSTTITGRTCQSWSSMTPHWH.RRIPLYYP..NAGL.TRNYCRNPDAE.IRPWCYTMD.PSVRWEYCN.LTRC  3973  
APOA_HUMAN_36   4009  DCYHGDGRSYRGISSTTVTGRTCQSWSSMIPHWH.QRTPENYP..NAGL.TENYCRNPDSG.KQPWCYTTD.PCVRWEYCN.LTQC  4087  
APOA_HUMAN_37   4123  QCYHGNGQSYRGTFSTTVTGRTCQSWSSMTPHRH.QRTPENYP..NDGL.TMNYCRNPDAD.TGPWCFTMD.PSIRWEYCN.LTRC  4201  
APOA_HUMAN_38   4227  DCMFGNGKGYRGKKATTVTGTPCQEWAAQEPHRHSTFIPGTNK..WAGL.EKNYCRNPDGDINGPWCYTMN.PRKLFDYCD.IPLC  4307  
APOA_MACMU-F_1     1  ........................................................................PNVRWEYCN.LTQC    13  
APOA_MACMU-F_2    49  ECYHGNGQSYRGTYFTTVTGRTCQAWSSMTPHSH.SRTPENYP..NGGL.IRNYCRNPDPV.AAPYCYTMD.PNVRWEYCN.LTQC   127  
APOA_MACMU-F_3   163  ECYHGNGQSYRGTYFTTVTGRTCQAWSSMTPHSH.SRTPENYP..NGGL.IRNYCRNPDPV.AAPYCYTMD.PNVRWEYCN.LTQC   241  
APOA_MACMU-F_4   277  ECYHGNGQSYRGTYFTTVTGRTCQAWSSMKPHSH.SRTPENYP..NGGL.IRNYCRNPDPV.AAPYCYTMD.PNVRWEYCN.LTQC   355  
APOA_MACMU-F_5   391  ECYHSNGQSYRGTYFTTVTGRTCQAWSSMTPHSH.SRTPENYP..NAGL.VKNYCRNPDPV.AAPWCYTTD.PSVRWEYCN.LTRC   469  
APOA_MACMU-F_6   505  ECYYHYGQSYRGTYSTTVTGRTCQAWSSMTPHQH.SRTPKNYP..NAGL.TRNYCRNPDAE.IRPWCYTMD.PSVRWEYCN.LTQC   583  
APOA_MACMU-F_7   619  DCYHGDGQSYRGSFSTTVTGRTCQSWSSMTPHWH.QRTTEYYP..DGGL.TRNYCRNPDAE.IRPWCYTMD.PSVRWEYCN.LTQC   697  
APOA_MACMU-F_8   725  DCYHGDGQSYRGSFSTTVTGRICQSWSSMTPHWH.QRTIEYYP..NGGL.TKNYCRNPDAE.IRPWCYTMD.PRVRWEYCN.LTQC   803  
APOA_MACMU-F_9   839  DCYQGDGQSYRGTFSTTITGRTCQSWLSMTPHRH.RRIPLRYP..NAGL.TRNYCRNRDAE.IRPWCYTMD.PSVRWEYCN.LTQC   917  
APOA_MACMU-F_10  953  DCYHGDGQSYRGTSSTTVTGRNCQSWSSMIPHWH.QRTPENYP..NAGL.TRNYCRNPDSG.KHPWCYTTD.PCVRWEYCN.LTQC  1031  
APOA_MACMU-F_11 1067  QCYHGNGQSYRGTFSTTVTGRTCQSWSSMTPHQH.KRTPENHP..NDDL.TMNYCRNPDAD.TGPWCFTMD.PSVRREYCN.LTRC  1145  
PLMN_BOVIN_1     109  ECKTGNGQTYRGTTAETKSGVTCQKWSATSPHVP.KFSPEKFP..LAGL.EENYCRNPDNDENGPWCYTTD.PDKRYDYCD.IPEC   188  
PLMN_BOVIN_2     191  KCMHCSGENYEGKIAKTMSGRDCQAWDSQSPHAH.GYIPSKFP..NKNL.KMNYCRNPDGE.PRPWCFTTD.PQKRWEFCD.IPRC   269  
PLMN_BOVIN_3     281  QCLKGTGKNYGGTVAVTESGHTCQRWSEQTPHKH.NRTPENFP..CKNL.EENYCRNPNGE.KAPWCYTTN.SEVRWEYCT.IPSC   359  
PLMN_BOVIN_4     383  DCYHGNGQSYRGTSSTTITGRKCQSWSSMTPHRH.LKTPENYP..NAGL.TMNYCRNPDAD.KSPWCYTTD.PRVRWEFCN.LKKC   461  
PLMN_BOVIN_5     484  DCMIGTGKSYRGKKATTVAGVPCQEWAAQEPHQHSIFTPETNP..QSGL.ERNYCRNPDGDVNGPWCYTMN.PRKPFDYCD.VPQC   564  
HGF_MOUSE_1      128  NCIIGKGGSYKGTVSITKSGIKCQPWNSMIPHEH.SFLPSSYR..GKDL.QENYCRNPRGEEGGPWCFTSN.PEVRYEVCD.IPQC   207  
HGF_MOUSE_2      211  ECMTCNGESYRGPMDHTESGKTCQRWDQQTPHRH.KFLPERYP..DKGF.DDNYCRNPDGK.PRPWCYTLD.PDTPWEYCA.IKTC   289  
HGF_MOUSE_3      305  ECIQGQGEGYRGTSNTIWNGIPCQRWDSQYPHKH.DITPENFK..CKDL.RENYCRNPDGA.ESPWCFTTD.PNIRVGYCSQIPKC   384  
HGF_MOUSE_4      391  DCYRGNGKNYMGNLSKTRSGLTCSMWDKNMEDLH..RHIFWEP.DASKL.NKNYCRNPDDDAHGPWCYTGN.PLIPWDYCP.ISRC   470  
Q9PU78-F_1         1  ................................................................PWCFTTL.PSMRVAFCFQIRRC    21  
Q9PU78-F_2        29  DCYHGNGELYRGHTSKTRKGVTCQKWSEQSPHVP.QISPTTHP..AAHL.DENYCRNPDNDSHGPWCYTMD.PRTPFDYCG.IKPC   108  
P70006_1         118  DCVVGNGNTYRGTVSKTKNGRTCQHWRLKFPHDH.KFSPTHWP....EL.EENYCRNPDSDPEGLWCYTTD.KNIRHQYCG.IKKC   195  
P70006_2         199  VCLTCNGEDYRGSVDRTESGKECQRWDLQAPHTH.PYKPEKYP..DKSL.DDNYCRNPDSS.ERPWCYTTD.PNVEREFCH.ITKC   277  
P70006_3         290  TCFKERGEGYRGKANTTTSGIPCQRWDTQAPHVH.RFLPEKYP..CKGL.DENYCRNPVGS.EAPWCFTTL.KNMRMAYCFQIKRC   369  
P70006_4         377  ECYHGNGELYRGRVSKTRKGIMCRRWEEKQNDLE.LSLAQPY...LVPL.EENYCRNPDRDSHGPWCYTMD.PNTPFDYCA.LKPC   455  
Q24488           236  NCYWEDGSTYRGVANVSASGKPCLRWSWL......MKEISDFP...ELIG.QNYCRNPGSVENSPWCFVDSSRERIIELCD.IPKC   310  

Key

alpha helix         RED
beta strand         GREEN
core blocks         UNDERSCORE
repeat              **********
Multiple alignment of the complete sequences
You can also look at the alignment in RSF format, or MSF format
You can also get the unaligned sequences in FASTA format
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