kringle_2_ref6 - reference 1

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Multiple alignment of complete sequences
Name                KRINGLE
Number of sequences 7


Key

alpha helix         RED
beta strand         GREEN
core blocks         UNDERSCORE
repeat              **********


                   **************************************************************************************
Q28398_01       1  ..............AVTASGHTCQQWRAQSPHSH.SRTPENYP..TKNL.VGNYCRNPDGE.IAPWCYTTN.SAVRWEYCS.IPAC    65  
Q28398_02      80  QCLEGTGENYRGSVAVTVSEHTCQRWREQSPHSH.SWTPENYP..TKNL.DGNYCRNTGGE.VAPWCYTTN.SAVRWEYCS.IPAC   158  
Q28398_03     173  QCLEGTGENYRGSVAVTASGHTCQQWRAQSPHSH.SRTPENYP..TKNL.VGNYCRNPDGE.IAPWCYTTN.SAVRWEYCS.IPAC   251  
Q28398_04     266  QCLEGTGENYRGSVAVTVSGHTCQRWREQSPHSH.SWTPENYP..TKNL.DGNYCRNTGGE.VAPWCYTTN.SAVRWEYCS.IPAC   344  
Q28398_05     359  QCLEGTGENYRGSVAVTASGHTCQQWRAQSPHSH.SRTPENYP..TKNL.VGNYCRNPDGE.IAPWCYTTN.SAVRWEYCS.IPAC   437  
Q28398_06     452  QCLEGTGENYRGSVAVTVSGHTCQRWREQSPHSH.SWTPENYP..TKNL.DGNYCRNTGGE.VAPWCYTTN.SAVRWEYCS.IPAC   530  
Q28398_07     545  QCLEGTGENYRGSVAVTASGHTCQQWRAQSPHSH.SRTPENYP..TKNL.VGNYCRNPDGE.IAPWCYTTN.SAVRWEYCS.IPAC   623  
Q28398_08     638  QCLEGTGENYRGSVAVTVSEHTCQRWREQSPHSH.SWTPENYP..TKNL.DGNYCRNTGGE.VAPWCYTTN.SAVRWEYCS.IPAC   716  
Q28398_09     731  QCLEGTGENYRGSVAVTASGHTCQQWRAQSPHSH.SRTPENYP..TKNL.VGNYCRNPDGE.IAPWCYTTN.SAVRWEYCS.IPAC   809  
Q28398_10     824  QCLEGTGENYRGSVAVTVSGHTCQRWREQSPHSH.SWTPENYP..TKNL.DGNYCRNTGGE.VAPWCYTTN.SAVRWEYCS.IPAC   902  
Q28398_11     917  QCLEGTGENYRGSVAVTASGHTCQQWRAQSPHSH.SRTPENYP..TKNL.VGNYCRNPDGE.IAPWCYTTN.SAVRWEYCS.IPAC   995  
Q28398_12    1010  QCLEGTGENYRGSVAVTVSGHTCQRWREQSPHSH.SWTPENYP..TKNL.DGNYCRNTGGE.VAPWCYTTN.SAVRWEYCS.IPAC  1088  
Q28398_13    1103  QCLEGTGENYRGSVAVTASGHTCQQWRAQSPHSH.SRTPENYP..TKNL.VGNYCRNPDGE.IAPWCYTTN.SAVRWEYCS.IPAC  1181  
Q28398_14    1196  QCLEGTGENYRGSVAVTVSGHTCQPWREQSPHSH.SWTPENYP..TKNL.DGNYCRNTGGE.VAPWCYTTN.SAVRWEYCS.IPAC  1274  
Q28398_15    1289  QCLEGTGENYRGSVAVTASGHTCQQWRAQSPHSH.SRTPENYP..TKNL.VGNYCRNPDGE.IAPWCYTTN.SAVRWEYCS.IPAC  1367  
Q28398_16    1382  QCLEGTGENYRGSVAVTVSGHTCQRWREQSPHSH.SWTPENYP..TKNL.DGNYCRNTGGE.VAPWCYTTN.SAVRWEYCS.IPAC  1460  
Q28398_17    1475  QCLEGTGENYRGSVAVTASGHTCQQWRAQSPHSH.SRTPENYP..TKNL.VGNYCRNPDGE.IAPWCYTTN.SAVRWEYCS.IPAC  1553  
Q28398_18    1568  QCLEGTGENYRGSVAVTVSGHTCQRWREQSPHSH.SWTPENYP..TKNL.DGNYCRNTGGE.VAPWCYTTN.SAVRWEYCS.IPAC  1646  
Q28398_19    1661  QCLEGTGENYRGSVAVTASGHTCQQWRAQSPHSH.SRTPENYP..TKNL.VGNYCRNPDGE.IAPWCYTTN.SAVRWEYCS.IPAC  1739  
Q28398_20    1754  QCLEGTGENYRGSVAVTVSGHTCQRWREQSPHSH.SWTPENYP..TKNL.DGNYCRNTGGE.VAPWCYTTN.SAVRWEYCS.IPAC  1832  
Q28398_21    1847  QCLEGTGENYRGSVAVTASGHTCQQWRAQSPHNH.SRTPENYP..TKNL.VGNYCRNPDGE.IAPWCYTTN.SAVRWEYCS.IPAC  1925  
Q28398_22    1940  QCLEGTGENYRGSVAVTVSGYTCQRWREQSPHSH.SWTPENYP..TKNL.DGNYCRNTGGE.VAPWCYTTN.SAVRWEYCS.IPAC  2018  
Q28398_23    2032  QCLEENGANYRGNMAVTASGHICQHWRRQRPHKH.EYTTENYP..SKNL.VGNYCRNPDGE.IAPWCYTTN.SAVRWEYCS.IPAC  2110  
Q28398_24    2125  QCLEGNGEDYRGNMSVTASGHTCQRWKEQTPHKH.KYTPESYP..SKNL.AGNYCRNTGGE.VAPWCYTTN.SAVRWEYCS.IPAC  2203  
Q28398_25    2218  QCLEGNGENYRGNMSVTISGYTCQNWRMQTPHGH.EYTPENYP..SKNL.VGNYCRNTGGE.VAPWCYTTN.SAVRWEYCS.IPAC  2296  
Q28398_26    2311  QCLEGNGENYRGSMAVTASGHRCQRWREQRPHKH.SRTPENYP..SKNL.IGNLCRNPDGE.VAPWCYTTN.SAVRWEYCS.IPAC  2389  
Q28398_27    2404  QCLEGTGENYRGNMAVTASGHTCQRWREQSPHSH.SRTPENYP..TKNL.VGNYCRNPDGE.VAPWCYTTN.SAVRWEYCS.IPAC  2482  
Q28398_28    2497  QCLEGTGENYRGNMAVTASGHTCQRWREQSPHSH.SRTPENYP..TKNL.VGNYCRNPDGE.VAPWCYTTN.SAMRWEYCS.IPAC  2575  
Q28398_29    2590  QCLEGNGENYQGNMAITVSGQPCQGWRKQTPHRH.EYTPENYP..SKNL.FGNYCRNPDGE.IAPWCYTTN.SAVRWEYCS.IPTC  2668  
Q28398_30    2683  QCLEGTGENYRGSVAVTVSGHTCQRWREQSPHSH.SRTPENYP..TKNL.FGNYCRNPDGE.VAPWCYTTN.SAVRWEYCK.IPSC  2761  
Q28398_31    2776  QCLKGNGESYQGNISVTVSGYTCQRWREQTPHRH.ARTPDNYP..CKNL.VGNYCRNPDGE.VAPWCYTTN.SAVRWEYCS.IPTC  2854  
PLMN_PIG_1     83  ECKTGNGKNYRGTTSKTKSGVICQKWSVSSPHIP.KYSPEKFP..LAGL.EENYCRNPDNDEKGPWCYTTD.PETRFDYCD.IPEC   162  
PLMN_PIG_2    165  ECMHCSGEHYEGKISKTMSGIECQSWGSQSPHAH.GYLPSKFP..NKNL.KMNYCRNPDGE.PRPWCFTTD.PNKRWEFCD.IPRC   243  
PLMN_PIG_3    255  QCLKGRGENYRGTVSVTASGHTCQRWSAQSPHKH.NRTPENFP..CKNL.EENYCRNPDGE.TAPWCYTTD.SEVRWDYCK.IPSC   333  
PLMN_PIG_4    357  DCYRGNGESYRGTSSTTITGRKCQSWVSMTPHRH.EKTPGNFP..NAGL.TMNYCRNPDAD.KSPWCYTTD.PRVRWEYCN.LKKC   435  
PLMN_PIG_5    460  DCMFGNGKRYRGKRATTVAGVPCQEWAAQEPHRHSIFTPETNP..RAGL.EKNYCRNPDGDDNGPWCYTTN.PQKLFDYCD.VPQC   540  
HGFL_HUMAN_1  109  TCIMNNGVGYRGTMATTVGGLPCQAWSHKFPNDH.KYTPTLRN....GL.EENFCRNPDGDPGGPWCYTTD.PAVRFQSCG.IKSC   186  
HGFL_HUMAN_2  190  ACVWCNGEEYRGAVDRTESGRECQRWDLQHPHQH.PFEPGKFL..DQGL.DDNYCRNPDGS.ERPWCYTTD.PQIEREFCD.LPRC   268  
HGFL_HUMAN_3  282  SCFRGKGEGYRGTANTTTAGVPCQRWDAQIPHQH.RFTPEKYA..CKDL.RENFCRNPDGS.EAPWCFTLR.PGMRAAFCYQIRRC   361  
HGFL_HUMAN_4  369  DCYHGAGEQYRGTVSKTRKGVQCQRWSAETPHKP.QFTFTSEP..HAQL.EENFCRNPDGDSHGPWCYTMD.PRTPFDYCA.LRRC   448  
HGFL_MOUSE_1  109  TCIMDNGVSYRGTVARTAGGLPCQAWSRRFPNDH.KYTPTPKN....GL.EENFCRNPDGDPRGPWCYTTN.RSVRFQSCG.IKTC   186  
HGFL_MOUSE_2  190  VCVLCNGEDYRGEVDVTESGRECQRWDLQHPHSH.PFQPEKFL..DKDL.KDNYCRNPDGS.ERPWCYTTD.PNVEREFCD.LPSC   268  
HGFL_MOUSE_3  291  NCFRGKGEDYRGTTNTTSAGVPCQRWDAQSPHQH.RFVPEKYA..CKDL.RENFCRNPDGS.EAPWCFTSR.PGLRMAFCHQIPRC   370  
HGFL_MOUSE_4  378  GCYHGSGEQYRGSVSKTRKGVQCQHWSSETPHKP.QFTPTSAP..QAGL.EANFCRNPDGDSHGPWCYTLD.PDILFDYCA.LQRC   457  
Q90865_1      107  ECIVANGTSYRGTRDTTERGLRCQHWQATTPHDH.RFLPSLRN....GL.EENYCRNPDRDKRGPWCYTVD.PNVRHQSCG.IKKC   184  
Q90865_2      188  VCMTCNGEDYRGFVDHTESGTECQRWDLQHPHKH.PYHPDKYP..EKGL.DDNYCRNPDSS.EQPWCYTTD.PALEREFCR.IRVC   266  
Q90865_3      278  GCYRGKGEGYRGRVNVTVSGIPCQRWDAQTLHRH.HFVPSKYP..CKDL.QENYCRNPDGS.EAPWCFTTR.PGMRVAFCFHIRRC   357  
Q90865_4      365  ECYHGHGERYHGHVSKTRKGITCQRWDATTPHVP.QISPTTHP..EAHL.EKNYCRNPDNDSHGPWCYTMD.PRTPFDYCA.IKPC   444  
UROT_HUMAN_1  126  TCYEDQGISYRGTWSTAESGAECTNWNSSALAQK.PYSGRRPDAIRLGLGNHNYCRNPDRD.SKPWCYVFKAGKYSSEFCS.TPAC   208  
UROT_HUMAN_2  214  DCYFGNGSAYRGTHSLTESGASCLPWNSMILIGK.VYTAQNPSAQALGLGKHNYCRNPDGD.AKPWCHVLKNRRLTWEYCD.VPSC   296  
URT1_DESRO    127  TCYEGQGVTYRGTWSTAESRVECINWNSSLLTRR.TYNGRMPDAFNLGLGNHNYCRNPNGA.PKPWCYVIKAGKFTSESCS.VPVC   209  

Key

alpha helix         RED
beta strand         GREEN
core blocks         UNDERSCORE
repeat              **********
Multiple alignment of the complete sequences
You can also look at the alignment in RSF format, or MSF format
You can also get the unaligned sequences in FASTA format
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