Name KTN+TRK
Number of sequences 10
Key
alpha helix RED
beta strand GREEN
core blocks UNDERSCORE
repeat **********
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trka_metma_1 1 ....................................................................................................................................................................................................................................................................................................................................................................................................................mKAVIIGAGEVGYHIAKALspkn..dVVIIDk.deeaakradel...dvLVIEGNGANAEILSRv.lqnad.lLVAVTgvdevNIVACMTAKLimknkngwkdtKTIARVSNPdyidspvtsraqv..gVDLMICPelalasevadilsspsaidaemfaeg...kvRMTEFAIs...peskLVGKHMQDLkl...adcCIVSAVfr.edQIIIPhgDDLIKANDHMVVVgk.pesmedlesvfgskvshr...............
trka_metma_2 231 ....................................................................................................................................................................................................................................................................................................................................................................................................................tRILLIGCGIVGMYLAKLIdkeenadLRIIEh.sksrcievaeil.enaLVLNGDGTDVSLLREeniedmd.vVVAVTdsdekNLLCSLLAKQlg.......akKVIARADRSdylplfemv......gIDMAVSPreatvnevlkltmgrgiqtltti.eg..eraEIIEYTAs...eksrIVGKPLNKVkf...pkgAP.................................................................
o29420_1 1 ....................................................................................................................................................................................................................................................................................................................................................................................................................mRIVIAGAGEVGYHLAMSLapnh..dVIIIEk.dvsrfervsel...dvVAINGNAANMKVLRDagverad.vFLAVTgndevNLLSGLAAKKvg.......akNVIVRVENPeyvdrpivkehpl..gYDVLICPqlslaqeaarligipgaievvtfsgg...kvEMIELQVm...egskADGKAIADLyl...pqnVVIASIyr.ngHIEIPrgDTVLRAGDRVAIVsk.tedvemlkgifgppvt.................
o29420_2 223 ....................................................................................................................................................................................................................................................................................................................................................................................................................rRVTIFGAGTIGSYTAKILakgmt.sVKLIEs.smercealsgel.egvRIVCGDATDIEFLIEeeigksd.aVLAATesdekNLLISLLSKNlg.......arIAIAKVEKReyvklfeav......gVDVALNPrsvtynevskllrtmrietlaei.eg....tAVVEVVVr....ntrLVGKALKDLpl...pkdAIIGAIvr.gnECLIPrgDTTIEYEDRLLVFak.wdeiekieeifr.....................
trka_ecoli_1 1 ....................................................................................................................................................................................................................................................................................................................................................................................................................mKIIILGAGQVGGTLAENLvgenn.dITVVDt.ngerlrtlqdkf..dlRVVQGHGSHPRVLREagaddad.mLVAVTssdetNMVACQVAYSlf......ntpNRIARIRSPdyvrdadklfhsdavpIDHLIAPeqlvidniyrlieypgalqvvnfaeg...kvSLAVVKAy...yggpLIGNALSTMrehmphidTRVAAIfr.hdRPIRPqgSTIVEAGDEVFFIaa.sqhiravmselqrlekpy...............
trka_ecoli_2 233 ....................................................................................................................................................................................................................................................................................................................................................................................................................kRIMLVGGGNIGAGLARRLekdy..sVKLIEr.nqqraaelaekl.qntIVFFGDASDQELLAEehidqvd.lFIAVTnddeaNIMSAMLAKRmg.......akKVMVLIQRRayvdlvqgs......vIDIAISPqqatisallshvrkadivgvsslrrg...vaEAIEAVAhgdestsrVVGRVIDEIkl...ppgTIIGAVvr.gnDVMIAndNLRIEQGDHVIMFltdkkfitdverlfqpspffl...............
p71354_1 1 ....................................................................................................................................................................................................................................................................................................................................................................................................................mKIIILGAGQVGTTLAENLvsedn.dITLVDn.espqlqtlqekh..dlRVVQGSPSSPKVLRDagaadad.lMVAVTasdeiNMVACQMGYTlf......ntpTRIARIRNSeylrekdklfnnenipIDHLISPenlvtdeitrliaypgalqvahfann...riSIVVVKAy...yggaLVGYALSAFrehmphidCRIMSIlr.ngKPIRPqgSTIVEAGDEITFIca.tehikaimgelqrlekpy...............
p71354_2 233 ....................................................................................................................................................................................................................................................................................................................................................................................................................kRVMIVGGGNVAFGVAKRLensc..tVKLIEr.dsnraqalaekl.pktLVFNGDASDQNLLFEehiesvd.vFLSLSsddeaNIMSALLAKRlg.......akKAMVLIQRIayinliqgg......tIDIAVSPqqvtisallghvrkgdvknvatlrhg...iaEAIEIVAhgnvntsnIVGRKIGELrl...pmgIIIGALlr.gnDVIIArrQVIIEEGDHIVIYlsdkknvpeieklfqpsaffi...............
O30021 1 .....................................................................................................................................................................................................................................................................................................................................................................................................................MYIVVSTGDRAARIASKLp.....dCIIIDr.dpdsaerlkek...gfNVLNGDASNPEILARfdmg....eKIILAdnddfNIKVVKTAKLl........glDVYAVAADEdkcwlyeve......gVSKIC.................gsveallstif..rknRYFEIQVe.....aeMEGKTLKEYge....dcMVISVFrd..gKVLQPfpDLELKAGDLLGLVc..geqvrttknpfdni...................
y13b_metja 108 ...........................................................................................................................................................................................................................................................................................mety.....ekielgiiviilliliesvilmtve.......gwdfftafytavvtistvgygdytp..qtflgklsviiyifagvgavaytmgniasffieghfrkyfrlrkmmdrikklnnHYIICGYGRLGKVIAEEFkkcni.pFVIIDs.deklleealekdp.nlICIVGDATSDDILKKakiekak.gLISVVssdaeNVFITLSAKKln......pniYIVAKAEKPstldklika......gADRAVCPyivggmeiariainpdivefihslvateedmEVRRYIVk....nkeLDNKLLKDSgire.ktgATILAVkkgdkTITSPppDTVINIGDIIYAFgt.keqleklkryvegve..................
O28600 104 .............................................................................................................................................................................................................................................................................................................msststpflkigiflslvvlagtvgyhfvegwdwfdslymtvititttgygevkpmgpggrvismllmfvgvgtflyavnvfmglivegriekrwekmiekmedHFILCGYGLMGREIIKELpkd...kVVVIDs.digkvsaared...gyVAVHGDATDDFTLEKagigka..kALICCmsdasNAFAILTAKEln......priKTVAILRSPdaekkmrrv......gVDILLSPyrdaakkiisllsekavaefvetvisg.aksLNLEKVVa....deyMDGKTLRELdlrrrtgcIVVAVVrr..gDVILPeaDTRLEKGDILYILcs.geaplel..........................
q53949 1 ....................................................................................................................................................................................................................................................................................................................................................................................................................mHIVIMGCGRVGSALAQALeqqgh.tVAVIDr.dptsfrrlgssf..ggRRVTGIGFDQDTLREagieeagafAAVSSg.dnsNIIAARVAREmf......gveNVAARIYDPrraevyqrl......gIPTVATVrwtadqmlrrllps.gaeplwrdptg...gvQLAEVHTs.....ssWVGHKISRLqe...etgVRVAFVtr.lgEAILPssQTVLQEGDLVHVMmr.tdevhkveaafakgpeeeggh............
Q55388 405 megsfsltlqiiltvlfgigaqvlagflklpsivfllifgvilgnsglhwiqpanfgdglevivslsvaiilfegglnlglrelgqvsgslrnlvtigtlitlvggglaahwlaefpwylaflygslvvvtgptvvgplikqvqvqksvatllegegvlidpvgailavvvletifntnvsvetdiieiamglilrlgvglaigvgggwllsnflkrasflsedvsnlvvlagvwgvfgaaqaslsesglmatvamgiylnssalpdnrllrrfkgkltllcvsvlfillaaelslssfgalgwgsvltvavlmlvirpisiaictwtsafnwrqklfvawiaprgivsasvaslfslllterginggdaiksivfltimmtvfiqgltakplakllritdthttGAVIIGCTPLGRLVARLFtaqge.sVVLIDsdpeacataiae....glTAIQTSALDSHALEKagieemg.aFMALTnngevNLVLAQNTINef....npprvCVIAPDNLPednpllknk......gVRIFM...........eqkt..fktwnqylkdg...qiKLGKTLFk...etglALQQAHTQAlir..sgeLLPLMLkrqgsLQLAK.tTENAQIGDEVFYLlh.dprpqllkqlsgsrspdvlipeplaeveevpiy
o54141 1 ....................................................................................................................................................................................................................................................................................................................................................................................................................mRVAIAGAGAVGRSIAGELlengh.eVLLIDk.aptaisvervp...maEWLLADACEITSLDEaalqrcn.vVIAATgddkvNLVVSLLAKTey......gvpRVVARVNNPknewlfnesw.....gVDVAVSTprlmsalveeavsvgdlvrllrfshg...daNLVELTLp...eesaLAGTQVGDVqw...pedTSLVTIir.gtRVLTPsrEDSLEAGDELLFVaa.qareeqledllsarrqpdgtl............
Key
alpha helix RED
beta strand GREEN
core blocks UNDERSCORE
repeat **********
Multiple alignment of repeats only
You can also look at the alignment in RSF format, or MSF format
You can also get the unaligned sequences in FASTA format
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