lrr_2_ref6 - reference 1

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Multiple alignment of complete sequences
Name                LRR
Number of sequences 8


Key

alpha helix         RED
beta strand         GREEN
core blocks         UNDERSCORE
repeat              **********


                    ********************************
PGS2_HUMAN_1    82  DTTLLDLQNNK.I......teikdgdf.knlk   105  
PGS2_HUMAN_2   106  NLHALILVNNK.I......skvspgaf.tplv   129  
PGS2_HUMAN_3   130  KLERLYLSKNQ.L......kelpek...mpk.   151  
PGS2_HUMAN_4   151  TLQELRAHENE.I......tkvrkvtf.ngln   174  
PGS2_HUMAN_5   175  QMIVIELGTNP.L....kssgiengaf.qgmk   200  
PGS2_HUMAN_6   201  KLSYIRIADTN.I......tsipqg.l.pp..   222  
PGS2_HUMAN_7   222  SLTELHLDGNK.I......srvdaasl.kgln   245  
PGS2_HUMAN_8   246  NLAKLGLSFNS.I......savdngsl.antp   269  
PGS2_HUMAN_9   270  HLRELHLDNNK.L......trvpgg.l.aehk   292  
PGS2_HUMAN_10  293  YIQVVYLHNNN.I......svvgssdf.cppg   316  
CHAD_BOVIN_01   54  KTKLLNLQRNN.F......pvlatnsf.ramp    77  
CHAD_BOVIN_02   78  NLVSLHLQHCQ.I......revaagaf.rglk   101  
CHAD_BOVIN_03  102  QLIYLYLSHND.I......rvlragaf.ddlt   125  
CHAD_BOVIN_04  126  ELTYLYLDHNK.V......telprgll.splv   149  
CHAD_BOVIN_05  150  NLFILQLNNNK.I......relrsgaf.qgak   173  
CHAD_BOVIN_06  174  DLRWLYLSENS.L......sslqpgal.ddve   197  
CHAD_BOVIN_07  198  NLAKFYLDRNQ.L......ssypsaal.sklr   221  
CHAD_BOVIN_08  222  VVEELKLSHNP.L......ksipdnaf.qsfg   245  
CHAD_BOVIN_09  247  YLETLWLDNTN.L......ekfsdgaf.lgvt   270  
CHAD_BOVIN_10  271  TLKHVHLENNR.L......hqlpsnfp.fd..   293  
CHAO_DROME_1    80  KVFMLHMENTG.L......reiepyfl.qst.   103  
CHAO_DROME_2   103  GMYRLKISGNH.L......teipddaf.tgle   126  
CHAO_DROME_3   128  SLWELILPQND.L......veipsksl.rhlq   151  
CHAO_DROME_4   152  KLRHLDLGYNH.I......thiqhdsf.rgle   175  
CHAO_DROME_5   177  SLQTLILRENC.I......sqlmshsf.sgll   200  
CHAO_DROME_6   201  ILETLDLSGNN.L......feidpnvf.vdgm   224  
CHAO_DROME_7   226  RLTRLLLTDNI.L......seipydal.gplk   249  
CHAO_DROME_8   250  SLRTLDISHNV.I.wslsgnetyeika.stkl   278  
CHAO_DROME_9   279  NLDNLHLEYNH.I......evlppnsf.kyfd   302  
CHAO_DROME_10  303  TVNRTFFDGNP.I......htlredaf.kpa.   326  
CHAO_DROME_11  326  RIREIYMRYCG.L......tnispvaf.dslv   349  
CHAO_DROME_12  351  SLQILDLSGNN.L......tklhhklf.nnfd   374  
CHAO_DROME_13  375  VLRVISMRDNK.I.....kiqkptetf.navh   399  
CHAO_DROME_14  402  LLKLDLSGDRN.D......ptnlqtlr.nmtr   425  
CHAO_DROME_15  428  NMRSLSISRLG.S......ssvgpedf.kdfg   451  
CHAO_DROME_16  453  ELEDLQITRAS.L......sgiqshaf.khvr   476  
CHAO_DROME_17  477  GLKRLDFSENG.I......ssiendaf.heig   500  
CHAO_DROME_18  502  SLISLKMSHGY.S.....gsalpaepl.rhlt   526  
CHAO_DROME_19  527  SLQELDFSNNH.I......ssmsdtsf.hflk   550  
CHAO_DROME_20  551  NLRLLELHDNR.I......eqvlkgtf.qgdi   574  
CHAO_DROME_21  577  KLEEISLRFNH.L......tsisqhtf.fdle   600  
CHAO_DROME_22  601  ALRKLHLDDNK.I......dkierraf.mnld   624  
CHAO_DROME_23  625  ELEYLSLRGNK.I......nnladesf.qnlp   648  
CHAO_DROME_24  649  KLEILDMAFNQ.L......pnfnfdyf.dqvg   672  
CHAO_DROME_25  673  TLSNLNVNVSH.N..qirqlmynssws.grne   700  
CHAO_DROME_26  708  NIKILDLSHNN.I......siihpgyf.rpae   731  
CHAO_DROME_27  733  SLTHLHLGYNS.L......mnttrdvf.gnmp   756  
CHAO_DROME_28  757  HLQWLDLSYNW.I......heldfdaf.kntk   780  
CHAO_DROME_29  781  QLQLVFFGHNY.L......sdipqdif.kpvq   804  
CHAO_DROME_30  805  GLRIVDFSHNH.L......rglpdnlf.yng.   828  
CHAO_DROME_31  828  GMEKLDVSHNM.M......lkipsssl.ssla   851  
CHAO_DROME_32  854  TLCELHLSNNF.I......stihsmdl.snkf   877  
CHAO_DROME_33  879  SLRYLDISYNY.L......lriddavf.atmp   902  
CHAO_DROME_34  903  KLAVLDLSHNR.D......lkvmdksf.mgle   926  
CHAO_DROME_35  928  SLIKLGLENVS.L......stvpeirl.k...   949  
CHAO_DROME_36  949  YLREFRLGYNE.L......psipqela.hnms   972  
CHAO_DROME_37  973  NLRMLDLSNND.L......tnvplmtq.alp.   996  
CHAO_DROME_38  996  HLRRLMLSGNP.I......tslnnnsf.dgvn  1019  
CHAO_DROME_39 1021  DLEMLDISNFR.L......hyfeygcl.dslp  1044  
CHAO_DROME_40 1045  HLRSLKLTAYS.H....lehfniphll.rhhy  1070  
CHAO_DROME_41 1071  NIRQLWIEAPQ.P......ftrivkkg.sgpt  1094  
GPV_MOUSE_01    51  NLTHILLFRMD.Q......gilrnhsf.sgmt    74  
GPV_MOUSE_02    75  VLQRQMLSDSH.I......saidpgtf.ndlv    98  
GPV_MOUSE_03    99  KLKTLRLTRNK.I......srlprail.dkmv   122  
GPV_MOUSE_04   123  LLEQLFLDHNA.L......rdldqnlf.qqlr   146  
GPV_MOUSE_05   147  NLQELGLNQNQ.L......sflpanlf.sslr   170  
GPV_MOUSE_06   171  ELKLLDLSRNN.L......thlpkgll.gaqv   194  
GPV_MOUSE_07   195  KLEKLLLYSNQ.L......tsvdsgll.snlg   218  
GPV_MOUSE_08   219  ALTELRLERNH.L......rsvapgaf.drlg   242  
GPV_MOUSE_09   243  NLSSLTLSGNL.L......eslppalf.lhvs   266  
GPV_MOUSE_10   267  SVSRLTLFENP.L......eelpdvlf.gema   290  
GPV_MOUSE_11   291  GLRELWLNGTH.L......stlpaaaf.rnls   314  
GPV_MOUSE_12   315  GLQTLGLTRNPrL......salprgvf.qglr   339  
GPV_MOUSE_13   340  ELRVLGLHTNA.L......aelrddal.rglg   363  
GPV_MOUSE_14   364  HLRQVSLRHNR.L......ralprtlf.rnls   387  
GPV_MOUSE_15   388  SLESVQLEHNQ.L......etlpgdvf.aalp   411  
A2GL_HUMAN_1    34  DTVHLAVEFFN.L......thlpanll.qgas    57  
A2GL_HUMAN_2    58  KLQELHLSSNG.L......eslspefl.rpvp    81  
A2GL_HUMAN_3    82  QLRVLDLTRNA.L......tglppglf.qasa   105  
A2GL_HUMAN_4   106  TLDTLVLKENQ.L......evlevswl.hglk   129  
A2GL_HUMAN_5   130  ALGHLDLSGNR.L......rklppgll.anft   153  
A2GL_HUMAN_6   154  LLRTLDLGENQ.L......etlppdll.rgpl   177  
A2GL_HUMAN_7   178  QLERLHLEGNK.L......qvlgkdll.lpqp   201  
A2GL_HUMAN_8   202  DLRYLFLNGNK.L......arvaagaf.qglr   225  
A2GL_HUMAN_9   226  QLDMLDLSNNS.L......asvpeglw.aslg   249  
A2GL_HUMAN_10  250  QPNWDMRDGFD.I......sgnpwicd.qnls   273  
rini_pig_01     24  QYEVVRLDDCG.L......teehckdigsalr    48  
rini_pig_02     52  SLTELCLRTNE.L......gdagvhlvlqglq    76  
rini_pig_03     81  KIQKLSLQNCS.L......teagcgvlpstlr   105  
rini_pig_04    109  TLRELHLSDNP.L......gdaglrllcegll   133  
rini_pig_05    138  HLEKLQLEYCR.L......taasceplasvlr   162  
rini_pig_06    166  ALKELTVSNND.I......geagarvlgqgla   190  
rini_pig_07    195  QLETLRLENCG.L......tpanckdlcgiva   219  
rini_pig_08    223  SLRELDLGSNG.L......gdagiaelcpgll   247  
rini_pig_09    252  RLKTLWLWECD.I......tasgcrdlcrvlq   276  
rini_pig_10    280  TLKELSLAGNK.L......gdegarllcesll   304  
rini_pig_11    309  QLESLWVKSCS.L......taaccqhvslmlt   333  
rini_pig_12    337  HLLELQLSSNK.L......gdsgiqelcqals   361  
rini_pig_13    366  TLRVLCLGDCE.V......tnsgcsslaslll   390  
rini_pig_14    394  SLRELDLSNNC.V......gdpgvlqllgsle   418  
rini_pig_15    423  ALEQLVLYDTY.W......tee.vedrlqale   446  
1YRGB_1          4  siegkslklda.i......ttedeksvfavll    28  
1YRGB_2         32  svkeivlsgnt.i......gteaarwlsenia    56  
1YRGB_3         60  dleiaefsdif.tgrvkdeipealrlllqall    90  
1YRGB_4         94  klhtvrlsdna.f......gptaqeplidfls   118  
1YRGB_5        122  plehlylhnng.l......gpqagakiaralq   146  
1YRGB_6        159  plrsiicgrnr.l......engsmkewaktfq   183  
1YRGB_7        187  llhtvkmvqng.i.....rpegiehlllegla   212  
1YRGB_8        216  elkvldlqdnt.f......thlgssalaialk   240  
1YRGB_9        244  nlrelglndcl.l......sargaaavvdafs   268  
1YRGB_10       274  glqtlrlqyne.i......eldavrtlktvid   298  
1YRGB_11       303  dllflelngnr.f....seeddvvdeirevfs   329  
1YRGB_12       333  .rgeldelddm.e...................   344  
1D0BA_1         42  sidqiiannsd.i...........ksvqgiqy    61  
1D0BA_2         64  nvtklflngnk.l...........tdikpltn    83  
1D0BA_3         86  nlgwlfldenk.i...........kdlsslkd   105  
1D0BA_4        108  klkslslehng.i...........sdinglvh   127  
1D0BA_5        130  qleslylgnnk.i...........tditvlsr   149  
1D0BA_6        152  kldtlslednq.i...........sdivplag   171  
1D0BA_7        174  klqnlylsknh.i...........sdlralag   193  
1D0BA_8        196  nldvlelfsqe.c...................   208  

Key

alpha helix         RED
beta strand         GREEN
core blocks         UNDERSCORE
repeat              **********
Multiple alignment of the complete sequences
You can also look at the alignment in RSF format, or MSF format
You can also get the unaligned sequences in FASTA format
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