sh3_1_ref6 - reference 6

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Multiple alignment of repeats only
Name                SH3
Number of sequences 9


Key

alpha helix         RED
beta strand         GREEN
core blocks         UNDERSCORE
repeat              **********


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ITK_HUMAN   174  ....................................................................................................................................................................mnnfilleeqlikksqqkrrtspsnfkvrffvltkaslayfedrhgkkr..tlkgsielsrikcveivksd.isipchykypfqvvhdnyllyvfapdresrqrwvlalkeetrnnnslvpkyhpnfwmdgkwrccsqleklatgcaqy...................dptknaskkplpptpednrrpl..wepeetvVIALYDYQTNDp....QELALRR.NEEYCLLDSS..eiHWWRVqdrn.gHEGYVPSSYLvekspnnlety.....ewynksisrdkaekllldtgkegafmvrdsrta.gtytvsvftkavvs..ennpcikhyhiketndnpkr.yyvaekyvfdsipllinyhqhnggglvtrlry.pvcfgrqkap.vtaglrygkwvidpseltfvqeigsgqfglvhlgywln.kdkvaiktiregamseedfieeaevmmklshpklvqlygvcleqapiclvfefmehgclsdylrtqrglfa..aetllgmcldvcegmayleeacvihrdlaarnclvgenqvikvsdfgmtrfvlddq.ytsstgtkfpvkwaspevfsfsryssksdvwsfgvlmwevfsegkipyenrsnsevvedistgfrlykprlasthvyq..imnhcwkerpedrpafsrllrqlaeiaesgl...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
O42200      169  ....................................................................................................................................................................myprvilketlykksqqkrrtspcnykertfilntqdlayfe..qrpgkkptqkgcielshikcveivrsdvpipcdyk.ypfqiihdsyylyvfapdndcrlkwvkalkeaiqnnslfl.kyhpdfwgegkwrccqqteklatgcsey.......ypngakp...lpptpdpsrrss...............epeeriVVALRNFIPKEh....TDLPLQK.DEEYFIVDCS..epNWWTVkdkd.gNVGSVPCIYVteklsnniekf.....ewynkdinrteaedllmqenkdggfmvrnskha.gvytvsiftrvsgsngekcpqvkhyqikvqsegekvlyylaekylfptipeliryhqhnpaglitrlrh.cvsrnvpnsa.rikelssdkweihpdevklsvelgsgqfglvwkgswqd..revavktvregfmseeefkeeaqvmmklshnrlvqlygvvtqrspiylvfefmengclteflrakkgkls..qkallemcldvsegmaylessnfihrdlaarnclvsensvvkiadfgmtrfvlddq.ytsshgskfpvrwsspevikfgkyssksdvwsfgvfmwevysegrtpydnrsnsevvetlnaghrllkprlcpqsvye..lmqwswkekpedrpsfalllhelacldqep............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
YES_CANFA    90  ........................................................................................................................................................................................................................................................................mgcikskedkgpaikyr..ntpep.vsvs..hygaeptqatpwpsssgwgtafnfsslsmtgfgg.ssgvtpfggasssfsvv..pspypagltggvtiFVALYDYEARTt....EDLSFKG.GERFQIINNT..egDWWEArsiatgKNGYIPSNYVapadsiaaee......wyfgkmgrkdaerlllnpgnqrgiflvresettkgayslsirdwdeirgd....nvkhykirkldn...ggyyittraqfdtlqklvkhstehadglchklttvcptvkpqtqgl.....akdaweipreslrlevklgqgcfgevwmgtwng.ttkvaiktlklgtmmpeaflqeaqimkklrhdklvplyavvse..epiyivtefmskgslldflkegdgkylklpqlvdmaaqiadgmayiermnyihrdlraanilvgenlvckiadfglarli.edneytarqgakfpikwtapeaalygrftiksdvwsfgilqtelttkgrvpypgmvnrevleqvergyrmpcpqgc..peslhelmnlcwkkdpderptfeyiqsfledyftaaepqyqpgenl..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
ABL2_HUMAN  110  ...........................................................................................................................................................................................................................................................mgqqvgrvgeapglqqpqprgirgssaarpsgrrrdpagrttetgfniftqhdhfascvedgfegdktggsspealhrpygcdvepqalneairwsskenll.gatesdpnlFVALYDFVASGd....NTLSITK.GEKLRVLGYN.qngEWSEVrsk..nGQGWVPSNYItpvnslekhs......wyhgpvsrsaaeyllsslin..gsflvresesspgqlsislry.....eg....rvyhyrinttad...gkvyvtaesrfstlaelvhhhstvadglvttlhypapkcnkptvygvsp..ihdkwemertditmkhklgggqygevyvgvwkkysltvavktlkedtmeveeflkeaavmkeikhpnlvqllgvctle.ppfyivteympygnlldylrecnreevtavvllymatqissameylekknfihrdlaarnclvgenhvvkvadfglsrlm.tgdtytahagakfpikwtapeslayntfsiksdvwafgvllweiatygmspypgidlsqvydllekgyrmeqpegc..ppkvyelmracwkwspadrpsfaethqafetmfhdssiseevaeelgraassssvvpylprlpilpsktrtlkkqvenkeniegaqdatensasslapgfirgaqassgspalprkqrdkspsslledaketcftrdrkggffssfmkkrnaptppkrsssfremenqphkkyeltgnfssvaslqhadgfsftpaqqeanlvppkcyggsfaqrnlcnddggggggsgtagggwsgitgfftprlikktlglragkptasddtskpfprsnstssmssglpeqdrmamtlprncqrsklqlertvstssqpeenvdrandmlpkkseesaapsrerpkakllprgatalplrtpsgdlaitekdppgvgvagvaaapkgkeknggarlgmagvpedgeqpgwpspakaapvlptthnhkvpvlisptlkhtpadvqligtdsqgnkfkllsehqvtssgdkdrprrvkpkcapppppvmrllqhpsicsdpteeptaltagqstsetqeggkkaalgavpisgkagrpvmpppqvplptssispakmangtagtkvalrktkqaaekisadkiskeallecadllssaltepvpnsqlvdtghqlldycsgyvdcipqtrnkfafreavsklelslqelqvssaaagvpgtnpvlnnllscvqeisdvvqr
O08635_1    362  mrlleedpwrrarygeenpnscspafaaekisprlsvasqakafrslgeglpsnppvpapqskalgdidlisfdddvlptsgspaeeptgsetvldpfqlptkteatkeravqpaptrkptviripakpgkclheepqsppplpaekpvgnthsavsgrpshsdrtrnpeleqasesgglvqgpprlpprpvhgkvipvwrpppkgaperppppklpaskssnknlpfnrsssdmdlqkkqshfvsglskaksqifknqdpvlpprpkpghplyrkymlsvphgianedivsrnptelsckrgdvlvilkqaennylecqrgegtgrvhpsqmkivtplderprgrpndsghsqkpvdsgaphAVALHDFPAEQa....DDLSLTS.GEIVYLLEKI..daEWYRGkcr..nQTGVFPANYVkvivdipegrsgkresfsshcakg..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
O08635_2    438  .........................................................................................................................................................................................................................................................................................................................................................................prCVARFEYIGDQk....DELSFSE.GEVIILTEYV..neEWGRGeir..dRSGIFPLNFVelvgdhptsganilstkvppktknedpgsnsqdssppg................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
O08635_3    528  .........................................................................................................................................................................................................................................................................................................................................................................ewCKALHSFTAETs....EDLPFKR.GDRILILERL..dsDWYRGrlh..dREGIFPAVFVqpcpaeakgvasaipkg.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
O08635_4    597  .........................................................................................................................................................................................................................................................................................................................................................................rkVKALYDFLGENe....DELSFKA.GDVITELEPI..ddAWMRGelm..gRAGMFPKNYVqflqvs................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
P79956_1      6  ....................................................................................................................................................................................................................................................................................................................................................................mtteeviVVAKFDYVAQQd....QELDIKK.NERLWLLDDS...kSWWRVrnst.nKTGFVPSNYVerknsarkasivknlkdtlgigkvkrkpsmpdsastaddglpdaerlydln...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
P79956_2    109  .........................................................................................................................................................................................................................................................................................................................................................................mpAYVKFTYAAERe....DELSLVK.GTKVIVMEKC..sdGWWRGsyn..gRVGWFPSNYVteendspsgd............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
P79956_3    171  .........................................................................................................................................................................................................................................................................................................................................................................hvVQALYPFSSSNe....EELNFEK.GEVMDVIEKPendpEWWKCqksn.gLVGLVPKNYVtimqniqptpsfepvpprcdyigpsasgrfagnqwyygkvtrhqaemalnergnegdflirdsesspndfsvslkaqgknkhfkvcmkdcmycigqrkfstmeelvehykkapiftseqgeklylikpls....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
O70254_1    137  .................................................................................................................................................................................................................................mdesalldllecpvclerldasakvlpcqhtfckrcllgivgsrnelrcpecrtlvgsgvdelpsnillvrlldgikqrpwkpgpgggggttctntlraqgstvvncgskdlqssqcgqqprvqawsppvrgipqlpcAKALYNYEGKEp....GDLKFSK.GDTIILRRQV..deNWYHGevs..gVHGFFPTNFVqiikplpqpp............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
O70254_2    199  .........................................................................................................................................................................................................................................................................................................................................................................pqCKALYDFEVKDkeadkDCLPFAK.DDVLTVIRRV..deNWAEGmla..dKIGIFPISYVefnsaakqliewdkppvpgvdtaecpsataqstsaskhpdtkkntrkrhsftsltmankssqgsqnrhsmeisppvlisssnptaaariselsglscsapsqvhisttglivtpppsspvttgpaftfpsdvpyqaalgsmnpplppppllaatvlastpsgataavaaaaaaaaaagmgprpvmgsseqiahlrpqtrp..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
O70254_3    455  .........................................................................................................................................................................................................................................................................................................................................................................svYVAIYPYTPRKe....DELELRK.GEMFLVFERC..qdGWYKGtsmhtsKIGVFPGNYVapvtravtnasqakvsmstagqasrgvtmvspstaggptqkpqgngvagnpsvvptavvsaahiqtspqakvllhmsgqmtvnqarnavrtvaahsqerptaavtpiqvqnaaclgpasvglphhslasqplppmagpaahgaavsisrtnapmacaagaslaspnmtsamletepsgrtvtilpglptspesaasacgnssagkpdkdskkekkgllkllsgastkrkprvsppasptldvelgageaplqgavgpelplggshgrvgscptdgdgpvaagtaalaqdafhrktssldsavpiappprqacsslgpvmnearpvvc...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
O70254_4    836  .........................................................................................................................................................................................................................................................................................................................................................................erHRVVVSYPPQSe....AELELKE.GDIVFVHKKR..edGWFKGtlqrngKTGLFPGSFVeni...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
CRK_MOUSE   135  ...........................................................................................................................................................................................................................magnfdseersswywgrlsrqeavallqgqrhgvflvrdsstspgdyvlsvsensrvshyiinssgp.rppvppspaqpppgvspsrlrigdqefdslpallefykihyldtttliepvarsrqgsgvilr.......qeeaeyVRALFDFNGNDe....EDLPFKK.GDILRIRDKP..eeQWWNAedse.gKRGMIPVPYVeky...............rpasasvsaliggn..qegshpqplggpepgp.yaqp..............svntplpnlqngpiyarviqkrvpnaydktalalevgelvkvtkinvsgqwegecngkrghfpfthvrlldqqnpdedfs.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
O60592_1    253  .............................................................................................................mntgrdsqspdspkgfrsvrpnlqdkrsptqsqitvngnsggavspmsyyqrpfspsayslpaslnssivmqhgtsldstdtypqhaqsldgttsssiplyrsseeekrvtvikaphypgigpvdesgiptairttvdrpkdwyktmfkqihmvhkpdddtdmyntpytynaglynppysaqshpaaktqtyrplskshsdnspnafkdasspvppphvpppvpplrprdrsstekhdwdppdrkvdtrkfrsePRSIFEYEPGKs....SILQHERPTDRINPDDIDlenePWYKFfse..lEFGRPPPKKPldyvqdhssgvfneaslyqssidrslerpmssasmasdfrkrrksepavgpprglgdqsasrtspgrvdlpgssttltksftssspsspsrakdresprsysstltdmgrsaprerrgtpekek..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
O60592_2    432  .........................................................................................................................................................................................................................................................................................................................................................................lpAKAVYDFKAQTs....KELSFKK.GDTVYILRKI..dqNWYEGehh..gRVGIFPISYVekltppekaqparppppaqpgei...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
O60592_3    507  .........................................................................................................................................................................................................................................................................................................................................................................geAIAKYNFNADTn....VELSLRK.GDRVILLKRV..dqNWYEGkipgtnRQGIFPVSYVevvkkntkgaedypdppiphsyssdrihslssnkpqrpvftheniqggg.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
O60592_4    610  .........................................................................................................................................................................................................................................................................................................................................................................epFQALYNYTPRNe....DELELRE.SDVIDVMEKC..ddGWFVGtsrrtkFFGTFPGNYVkrl...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................

Key

alpha helix         RED
beta strand         GREEN
core blocks         UNDERSCORE
repeat              **********
Multiple alignment of repeats only
You can also look at the alignment in RSF format, or MSF format
You can also get the unaligned sequences in FASTA format
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