sh3_2_ref6 - reference 6

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Multiple alignment of repeats only
Name                SH3
Number of sequences 5


Key

alpha helix         RED
beta strand         GREEN
core blocks         UNDERSCORE
repeat              **********


                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ***********************************************************************                                                                                                                                                                                                                                                                                                                                                                          
DRK_DROME_1     1  ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................meAIAKHDFSATAd....DELSFRKTQILKILNME......ddsNWYRAeld.....gKEGLIPSNYIemknhdwyygritradaekllsnkhegaflirisesspgdfslsvkcpdgvqhfkvlrdaqskfflwvvkfnslnelveyhrtasvsrsqdvklrdmipee........................................................................................................................................................................................................................................................................
DRK_DROME_2   155  ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................mlVQALYDFVPQEs....GELDFRRGDVITVTDRS.......deNWWNGeig.....nRKGIFPATYVtpyhs........................................................................................................................................................................................................................................................................................................................................................................
ITSN_HUMAN_1  119  ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................meaerlkqkeqerkiielekqkeeaqrraqerdkqwlehvqqedehqrprklheeeklkreesvkkkdgeekgkqeaqdklgrlfhqhqepakpavqapwstaekgpltisaqenvkvvyYRALYPFESRSh....DEITIQPGDIVMVDESQt.....gepGWLGGelk.....gKTGWFPANYAekipenevpapvkpvtdstsapapklalretpaplavtssepsttpnnwadfsstwptstnekpetdnwdawaaqpsltvpsagqlrqrsaftpatatgsspspvlgqgekveg...........................................................................................................................................................................................................................................................
ITSN_HUMAN_2  287  ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................lqAQALYPWRAKKd....NHLNFNKNDVITVLEQQ........dMWWFGevq.....gQKGWFPKSYVklisgpirkstsmdsgssespaslkrvaspaakpvvsg.......................................................................................................................................................................................................................................................................................................................................
ITSN_HUMAN_3  376  ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................eiAQVIASYTATGp....EQLTLAPGQLILIRKKN.......pgGWWEGelqargkkrQIGWFPANYVkllspgtskitpteppkstalaav.....................................................................................................................................................................................................................................................................................................................................................
ITSN_HUMAN_4  457  ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................cqVIGMYDYTAQNd....DELAFNKGQIINVLNKE.......dpDWWKGevn.....gQVGLFPSNYVklttdmdpsqq..................................................................................................................................................................................................................................................................................................................................................................
NCK_HUMAN_1     5  ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................maeevvVVAKFDYVAQQe....QELDIKKNERLWLLDDS........kSWWRVrnsm....nKTGFVPSNYVerknsarkasivknlkdtlgigkvkrkpsvpdsaspaddsfvdpgerlydln.........................................................................................................................................................................................................................................................................................................................
NCK_HUMAN_2   109  ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................mpAYVKFNYMAERe....DELSLIKGTKVIVMEKC.......sdGWWRGsyn.....gQVGWFPSNYVteegdsplgd...................................................................................................................................................................................................................................................................................................................................................................
NCK_HUMAN_3   171  ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................hvVQALYPFSSSNd....EELNFEKGDVMDVIEKPe.....ndpEWWKCrkin....gMVGLVPKNYVtvmqnnpltsglepsppqcdyirpsltgkfagnpwyygkvtrhqaemalnerghegdflirdsesspndfsvslkaqgknkhfkvqlketvycigqrkfstmeelvehykkapiftseqgeklylvkhls...........................................................................................................................................................................................................................................
O95062_1       80  .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................efaaastkallpptvslsatstsseplssnqpasvtdyqnvsfsnltvntswqkksaftrtvspgsvspihgqgqvvenlkAQALCSWTAKKd....NHLNFSKHDIITVLEQQ........eNWWFGevh.....gGRGWFPKSYVkiipgsevkreepealyaavnkkptsaaysvg.............................................................................................................................................................................................................................................................................................................................................
O95062_2      163  ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................eeYIALYPYSSVEp....GDLTFTEGEEILVTQKD........gEWWTGsig.....dRSGIFPSNYVkpkdqesfgsasksgasnkkp........................................................................................................................................................................................................................................................................................................................................................
O95062_3      235  ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................eiAQVTSAYVASGs....EQLSLAPGQLILILKKN.......tsGWWQGelqargkkrQKGWFPASHVkllgpsseratpafhpv............................................................................................................................................................................................................................................................................................................................................................
O95062_4      309  ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................cqVIAMYDYAANNe....DELSFSKGQLINVMNKD.......dpDWWQGein.....gVTGLFPSNYVkmttdsdpsqqwcadlqtldtmqpierkrqgyiheliqteeryma.dlqlvvevfqkrmaesgfltegemalifvnwkelimsntkllkalrvrkktgvdaaans....................................................................................................................................................................................................................................................................
Q9UNK1_1      743  maqfptpfggsldiwaitveerakhdqqfhslkpisgfitgdqarnfffqsglpqpvlaqiwaladmnndgrmdqvefsiamkliklklqgyqlpsalppvmkqqpvaissapafgmggiasmppltavapvpmgsipvvgmsptlvssvptaavpplangappviqplpafahpaatlpksssfsrsgpgsqlntklqkaqsfdvasvppvaewavpqssrlkyrqlfnshdktmsghltgpqartilmqsslpqaqlasiwnlsdidqdgkltaeefilamhlidvamsgqplppvlppeyippsfrrvrsgsgisvisstsvdqrlpeepvledeqqqlekklpvtfedkkrenfergnlelekrrqalleqqrkeqerlaqleraeqerkererqeqerkrqlelekqlekqrelerqreeerrkeierreaakrelerqrqlewernrrqellnqrnkeqedivvlkakkktlefelealndkkhqlegklqdircrlttqrqeiestnksrelriaeithlqqqlqesqqmlgrlipekqilndqlkqvqqnslhrdslvtlkraleakelarqhlrdqldeveketrsklqeidifnnqlkelreihnkqqlqkqksmeaerlkqkeqerkiielekqkeeaqrraqerdkqwlehvqqedehqrprklheeeklkreesvkkkdgeekgkqeaqdklgrlfhqhqepakpavqapwstaekgpltisaqenvkvvyYRALYPFESRSh....DEITIQPGDIVMVKGEWvdesqtgepGWLGGelk.....gKTGWFPANYAekipenevpapvkpvtdstsapapklalretpaplavtssepsttpnnwadfsstwptstnekpetdnwdawaaqpsltvpsagqlrqrsaftpatatgsspspvlgqgekveg...........................................................................................................................................................................................................................................................
Q9UNK1_2      916  ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................lqAQALYPWRAKKd....NHLNFNKNDVITVLEQQ........dMWWFGevq.....gQKGWFPKSYVklisgpirkstsmdsgssespaslkrvaspaakpvvsg.......................................................................................................................................................................................................................................................................................................................................
Q9UNK1_3     1005  ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................eeFIAMYTYESSEq....GDLTFQQGDVILVTKKD........gDWWTGtvg.....dKAGVFPSNYVrlkdsegsgtagktgslgkkp........................................................................................................................................................................................................................................................................................................................................................
Q9UNK1_4     1077  ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................eiAQVIASYTATGp....EQLTLAPGQLILIRKKN.......pgGWWEGelqargkkrQIGWFPANYVkllspgtskitpteppkstalaav.....................................................................................................................................................................................................................................................................................................................................................
Q9UNK1_5     1158  ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................cqVIGMYDYTAQNd....DELAFNKGQIINVLNKE.......dpDWWKGevn.....gQVGLFPSNYVklttdmdpsqq..................................................................................................................................................................................................................................................................................................................................................................

Key

alpha helix         RED
beta strand         GREEN
core blocks         UNDERSCORE
repeat              **********
Multiple alignment of repeats only
You can also look at the alignment in RSF format, or MSF format
You can also get the unaligned sequences in FASTA format
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