sushi_1_ref6 - reference 6

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Multiple alignment of repeats only
Name                SUSHI
Number of sequences 6


Key

alpha helix         RED
beta strand         GREEN
core blocks         UNDERSCORE
repeat              **********


                                                                                                                                                                                                                       *****************************************************************************************                                                                           
CR1_HUMAN_1     42  ..........................................................................................................................................................mgassprspepvgppapglpfccggsllavvvllalpvawgQCNAp.EWLPFArptnltd.......EFEFPI..GTYLNYECRP......GYSGRP....FSIICLKn....SVWTGa....KDRCRRk...........................................................................
CR1_HUMAN_2    103  ...................................................................................................................................................................................................SCRNp.PDPVNGmvhv..........IKGIQF..GSQIKYSCTK......GYRLIG...sSSATCIIsg.dtVIWDNe....TPICDRi...........................................................................
CR1_HUMAN_3    165  ...................................................................................................................................................................................................PCGLp.PTITNGdfistn........RENFHY..GSVVTYRCNPgsggrkVFELVG...ePSIYCTSnddqvGIWSGp....APQCIIpn..........................................................................
CR1_HUMAN_4    237  ...................................................................................................................................................................................................KCTP..PNVENGilvsdn........RSLFSL..NEVVEFRCQP......GFVMKG...pRRVKCQAl....NKWEPe....LPSCSR............................................................................
CR1_HUMAN_5    296  ...................................................................................................................................................................................................VCQPp.PDVLHAertqrd........KDNFSP..GQEVFYSCEP......GYDLRG...aASMRCTPq....GDWSPa....APTCEVk...........................................................................
CR1_HUMAN_6    357  ...................................................................................................................................................................................................SCDDfmGQLLNGrvlf..........PVNLQL..GAKVDFVCDE......GFQLKG...sSASYCVLag.meSLWNSs....VPVCEQi...........................................................................
CR1_HUMAN_7    420  ...................................................................................................................................................................................................FCPSp.PVIPNGrhtgkp........LEVFPF..GKAVNYTCDPhpdrgtSFDLIG...eSTIRCTSdpqgnGVWSSp....APRCGIlg..........................................................................
CR1_HUMAN_8    492  ...................................................................................................................................................................................................HCQAp.DHFLFAklktqtn.......ASDFPI..GTSLKYECRP......EYYGRP....FSITCLDn....LVWSSp....KDVCKRk...........................................................................
CR1_HUMAN_9    553  ...................................................................................................................................................................................................SCKTp.PDPVNGmvhv..........ITDIQV..GSRINYSCTT......GHRLIG...hSSAECILsg.naAHWSTk....PPICQRi...........................................................................
CR1_HUMAN_10   615  ...................................................................................................................................................................................................PCGLp.PTIANGdfistn........RENFHY..GSVVTYRCNPgsggrkVFELVG...ePSIYCTSnddqvGIWSGp....APQCIIpn..........................................................................
CR1_HUMAN_11   687  ...................................................................................................................................................................................................KCTP..PNVENGilvsdn........RSLFSL..NEVVEFRCQP......GFVMKG...pRRVKCQAl....NKWEPe....LPSCSR............................................................................
CR1_HUMAN_12   746  ...................................................................................................................................................................................................VCQPp.PDVLHAertqrd........KDNFSP..GQEVFYSCEP......GYDLRG...aASMRCTPq....GDWSPa....APTCEVk...........................................................................
CR1_HUMAN_13   807  ...................................................................................................................................................................................................SCDDfmGQLLNGrvlf..........PVNLQL..GAKVDFVCDE......GFQLKG...sSASYCVLag.meSLWNSs....VPVCEQi...........................................................................
CR1_HUMAN_14   870  ...................................................................................................................................................................................................FCPSp.PVIPNGrhtgkp........LEVFPF..GKAVNYTCDPhpdrgtSFDLIG...eSTIRCTSdpqgnGVWSSp....APRCGIlg..........................................................................
CR1_HUMAN_15   942  ...................................................................................................................................................................................................HCQAp.DHFLFAklktqtn.......ASDFPI..GTSLKYECRP......EYYGRP....FSITCLDn....LVWSSp....KDVCKRk...........................................................................
CR1_HUMAN_16  1003  ...................................................................................................................................................................................................SCKTp.PDPVNGmvhv..........ITDIQV..GSRINYSCTT......GHRLIG...hSSAECILsg.ntAHWSTk....PPICQRi...........................................................................
CR1_HUMAN_17  1065  ...................................................................................................................................................................................................PCGLp.PTIANGdfistn........RENFHY..GSVVTYRCNLgsrgrkVFELVG...ePSIYCTSnddqvGIWSGp....APQCIIpn..........................................................................
CR1_HUMAN_18  1137  ...................................................................................................................................................................................................KCTP..PNVENGilvsdn........RSLFSL..NEVVEFRCQP......GFVMKG...pRRVKCQAl....NKWEPe....LPSCSR............................................................................
CR1_HUMAN_19  1196  ...................................................................................................................................................................................................VCQPp.PEILHGehtpsh........QDNFSP..GQEVFYSCEP......GYDLRG...aASLHCTPq....GDWSPe....APRCAVk...........................................................................
CR1_HUMAN_20  1257  ...................................................................................................................................................................................................SCDDflGQLPHGrvlf..........PLNLQL..GAKVSFVCDE......GFRLKG...sSVSHCVLvg.mrSLWNNs....VPVCEHi...........................................................................
CR1_HUMAN_21  1320  ...................................................................................................................................................................................................FCPNp.PAILNGrhtgtp........SGDIPY..GKEISYTCDPhpdrgmTFNLIG...eSTIRCTSdphgnGVWSSp....APRCELsvrag.......................................................................
CR1_HUMAN_22  1395  ...................................................................................................................................................................................................HCKTp.EQFPFAsptipin.......DFEFPV..GTSLNYECRP......GYFGKM....FSISCLEn....LVWSSv....EDNCRRk...........................................................................
CR1_HUMAN_23  1456  ...................................................................................................................................................................................................SCGPp.PEPFNGmvhi..........NTDTQF..GSTVNYSCNE......GFRLIG...sPSTTCLVsg.nnVTWDKk....APICEIi...........................................................................
CR1_HUMAN_24  1518  ...................................................................................................................................................................................................SCEPp.PTISNGdfysnn........RTSFHN..GTVVTYQCHTgpdgeqLFELVG...eRSIYCTSkddqvGVWSSp....PPRCIStn..........................................................................
CR1_HUMAN_25  1590  ...................................................................................................................................................................................................KCTA..PEVENAirvpgn........RSFFSL..TEIIRFRCQP......GFVMVG...sHTVQCQTn....GRWGPk....LPHCSR............................................................................
CR1_HUMAN_26  1649  ...................................................................................................................................................................................................VCQPp.PEILHGehtlsh........QDNFSP..GQEVFYSCEP......SYDLRG...aASLHCTPq....GDWSPe....APRCTVk...........................................................................
CR1_HUMAN_27  1710  ...................................................................................................................................................................................................SCDDflGQLPHGrvll..........PLNLQL..GAKVSFVCDE......GFRLKG...rSASHCVLag.mkALWNSs....VPVCEQi...........................................................................
CR1_HUMAN_28  1773  ...................................................................................................................................................................................................FCPNp.PAILNGrhtgtp........FGDIPY..GKEISYACDThpdrgmTFNLIG...eSSIRCTSdpqgnGVWSSp....APRCELsvpa........................................................................
CR1_HUMAN_29  1847  ...................................................................................................................................................................................................ACPHp.PKIQNGhyiggh........VSLYLP..GMTISYTCDP......GYLLVG...kGFIFCTDq....GIWSQl....DHYCKEv...........................................................................
CR1_HUMAN_30  1908  ...................................................................................................................................................................................................NCSF..PLFMNGiskelem.......KKVYHY..GDYVTLKCED......GYTLEG...sPWSQCQAd....DRWDPp....LAKCTSr....ahdalivgtlsgtiffilliiflswiilkhrkgnnahenpkevaihlhsqggssvhprtlqtneensrvlp
Q16744_1        42  ..........................................................................................................................................................mgassprspepvgppapglpfccggsllavvvllalpvawgQCNAp.EWLPFArptnltd.......EFEFPI..GTYLNYECRP......GYSGRP....FSIICLKn....SVWTGa....KDRCRRk...........................................................................
Q16744_2       103  ...................................................................................................................................................................................................SCRNp.PDPVNGmvhv..........IKGIQF..GSQIKYSCTK......GYRLIG...sSSATCIIsg.dtVIWDNe....TPICDRi...........................................................................
Q16744_3       165  ...................................................................................................................................................................................................PCGLp.PTITNGdfistn........RENFHY..GSVVTYRCNPgsggrkVFELVG...ePSIYCTSnddqvGIWSGp....APQCIIpn..........................................................................
Q16744_4       237  ...................................................................................................................................................................................................KCTP..PNVENGilvsdn........RSLFSL..NEVVEFRCQP......GFVMKG...pRRVKCQAl....NKWEPe....LPSCSR............................................................................
Q16744_5       296  ...................................................................................................................................................................................................VCQPp.PDVLHAertqrd........KDNFSP..GQEVFYSCEP......GYDLRG...aASMRCTPq....GDWSPa....APTCEVk...........................................................................
Q16744_6       357  ...................................................................................................................................................................................................SCDDfmGQLLNGrvlf..........PVNLQL..GAKVDFVCDE......GFQLKG...sSASYCVLag.meSLWNSs....VPVCEQi...........................................................................
Q16744_7       420  ...................................................................................................................................................................................................FCPSp.PVIPNGrhtgkp........LEVFPF..GKAVNYTCDPhpdrgtSFDLIG...eSTIRCTSdpqgnGVWSSp....APRCGIlg..........................................................................
Q16744_8       492  ...................................................................................................................................................................................................HCQAp.DHFLFAklktqtn.......ASDFPI..GTSLKYECRP......EYYGRP....FSITCLDn....LVWSSp....KDVCKRk...........................................................................
Q16744_9       553  ...................................................................................................................................................................................................SCKTp.PDPVNGmvhv..........ITDIQV..GSRINYSCTT......GHRLIG...hSSAECILsg.naAHWSTk....PPICQRi...........................................................................
Q16744_10      615  ...................................................................................................................................................................................................PCGLp.PTIANGdfistn........RENFHY..GSVVTYRCNPgsggrkVFELVG...ePSIYCTSnddqvGIWSGp....APQCIIpn..........................................................................
Q16744_11      687  ...................................................................................................................................................................................................KCTP..PNVENGilvsdn........RSLFSL..NEVVEFRCQP......GFVMKG...pRRVKCQAl....NKWEPe....LPSCSR............................................................................
Q16744_12      746  ...................................................................................................................................................................................................VCQPp.PDVLHAertqrd........KDNFSP..GQEVFYSCEP......GYDLRG...aASMRCTPq....GDWSPa....APTCEVk...........................................................................
Q16744_13      807  ...................................................................................................................................................................................................SCDDfmGQLLNGrvlf..........PVNLQL..GAKVDFVCDE......GFQLKG...sSASYCVLag.meSLWNSs....VPVCEQi...........................................................................
Q16744_14      870  ...................................................................................................................................................................................................FCPSp.PVIPNGrhtgkp........LEVFPF..GKAVNYTCDPhpdrgtSFDLIG...eSTIRCTSdpqgnGVWSSp....APRCGIlg..........................................................................
Q16744_15      942  ...................................................................................................................................................................................................HCQAp.DHFLFAklktqtn.......ASDFPI..GTSLKYECRP......EYYGRP....FSITCLDn....LVWSSp....KDVCKRk...........................................................................
Q16744_16     1003  ...................................................................................................................................................................................................SCKTp.PDPVNGmvhv..........ITDIQV..GSRINYSCTT......GHRLIG...hSSAECILsg.ntAHWSTk....PPICQRi...........................................................................
Q16744_17     1065  ...................................................................................................................................................................................................PCGLp.PTIANGdfistn........RENFHY..GSVVTYRCNPgsggrkVFELVG...ePSIYCTSnddqvGIWSGp....APQCIXpn..........................................................................
Q16744_18     1137  ...................................................................................................................................................................................................KCTP..PNVENGilvsdn........RSLFSL..NEVVEFRCQP......GFVMKG...pRRVKCQAl....NKWEPe....LPSCSR............................................................................
Q16744_19     1196  ...................................................................................................................................................................................................VCQPp.PDVLHAertqrd........KDNFSP..GQEVFYSCEP......GYDLRG...aASMRCTPq....GDWSPa....APTCEVk...........................................................................
Q16744_20     1257  ...................................................................................................................................................................................................SCDDfmGQLLNGrvlf..........PVNLQL..GAKVDFVCDE......GFQLKG...sSASYCVLag.meSLWNSs....VPVCEQi...........................................................................
Q16744_21     1320  ...................................................................................................................................................................................................FCPSp.PVIPNGrhtgkp........LEVFPF..GKAVNYTCDPhpdrgtSFDLIG...eSTIRCTSdpqgnGVWSSp....APRCGIlg..........................................................................
Q16744_22     1392  ...................................................................................................................................................................................................HCQAp.DHFLFAklktqtn.......ASDFPI..GTSLKYECRP......EYYGRP....FSITCLDn....LVWSSp....KDVCKRk...........................................................................
Q16744_23     1453  ...................................................................................................................................................................................................SCKTp.PDPVNGmvhv..........ITDIXV..GSRINYSCTT......GHRLIG...hSSAECILsg.ntAHWSTk....PPICQRi...........................................................................
Q16744_24     1515  ...................................................................................................................................................................................................PCGLp.PTIANGdfistn........RENFHY..GSVVTYRCNLgsrgrkVFELVG...ePSIYCTSnddqvGIWSGp....APQCIIpn..........................................................................
Q16744_25     1587  ...................................................................................................................................................................................................KCTP..PNVENGilvsdn........RSLFSL..NEVVEFRCQP......GFVMKG...pRRVKCQAl....NKWEPe....LPSCSR............................................................................
Q16744_26     1646  ...................................................................................................................................................................................................VCQPp.PEILHGehtpsh........QDNFSP..GQEVFYSCEP......GYDLRG...aASLHCTPq....GDWSPe....APRCAVk...........................................................................
Q16744_27     1707  ...................................................................................................................................................................................................SCDDflGQLPHGrvlf..........PLNLQL..GAKVSFVCDE......GFRLKG...sSVSHCVLvg.mrSLWNNs....VPVCEHi...........................................................................
Q16744_28     1770  ...................................................................................................................................................................................................FCPNp.PAILNGrhtgtp........SGDIPY..GKEISYTCDPhpdrgmTFNLIG...eSTIRCTSdphgnGVWSSp....APRCELsvrag.......................................................................
Q16744_29     1845  ...................................................................................................................................................................................................HCKTp.EQFPFAsptipin.......DFEFPV..GTSLNYECRP......GYFGKM....FSISCLEn....LVWSSv....EDNCRRk...........................................................................
Q16744_30     1906  ...................................................................................................................................................................................................SCGPp.PEPFNGmvhi..........NTDTQF..GSTVNYSCNE......GFRLIG...sPSTTCLVsg.nnVTWDKk....APICEIi...........................................................................
Q16744_31     1968  ...................................................................................................................................................................................................SCEPp.PTISNGdfysnn........RTSFHN..GTVVTYQCHTgpdgeqLFELVG...eRSIYCTSkddqvGVWSSp....PPRCIStn..........................................................................
Q16744_32     2040  ...................................................................................................................................................................................................KCTA..PEVENAirvpgn........RSFFSL..TEIVRFRCQP......GFVMVG...sHTVQCQTn....GRWGPk....LPHCSR............................................................................
Q16744_33     2099  ...................................................................................................................................................................................................VCQPp.PEILHGehtlsh........QDNFSP..GQEVFYSCEP......SYDLRG...aASLHCTPq....GDWSPe....APRCTVk...........................................................................
Q16744_34     2160  ...................................................................................................................................................................................................SCDDflGQLPHGrvll..........PLNLQL..GAKVSFVCDE......GFRLKG...rSASHCVLag.mkALWNSs....VPVCEQi...........................................................................
Q16744_35     2223  ...................................................................................................................................................................................................FCPNp.PAILNGrhtgtp........FGDIPY..GKEISYACDThpdrgmTFNLIG...eSSIRCTSdrqgnGVWSSp....APRCELsvpa........................................................................
Q16744_36     2297  ...................................................................................................................................................................................................ACPDp.PKIQNGhyiggh........VSLYLP..GMTISYICDP......GYLLVG...kGFIFCTDq....GIWSQl....DHYCKEv...........................................................................
Q16744_37     2358  ...................................................................................................................................................................................................NCSF..PLFMNGiskelem.......KKVYHY..GDYVTLKCED......GYTLEG...sPWSQCQAd....DRWDPp....LAKCTSr....ahdalivgtlsgtiffilliiflswiilkhrkgnnahenpkevaihlhsqggssvhprtlqtneensrvlp
CFAH_MOUSE_1    20  ...............................................................................................................................................................................mrlsariiwlilwtvcaae.DCKGppPRENSEilsgsws.......EQLYPE..GTQATYKCRP......GYRTLG...tIVKVCKN.....GKWVAsnp..SRICRKk...........................................................................
CFAH_MOUSE_2    84  ...................................................................................................................................................................................................PCGHp.GDTPFGsfrlav........GSQFEF..GAKVVYTCDD......GYQLLG..eiDYRECGA.....DGWINd....IPLCEVv...........................................................................
CFAH_MOUSE_3   145  ...................................................................................................................................................................................................KCLPv.TELENGrivsgaaet.....DQEYYF..GQVVRFECNS......GFKIEG...hKEIHCSEn....GLWSNe....KPRCVEi...........................................................................
CFAH_MOUSE_4   209  ...................................................................................................................................................................................................LCTP..PRVENGdginv.........KPVYKE..NERYHYKCKH......GYVPKE...rGDAVCTG.....SGWSS.....QPFCEEk...........................................................................
CFAH_MOUSE_5   266  ...................................................................................................................................................................................................RCSP..PYILNGiytph.........RIIHRS..DDEIRYECNY......GFYPVT..gsTVSKCTP.....TGWIP.....VPRCTLk...........................................................................
CFAH_MOUSE_6   324  ...................................................................................................................................................................................................PCEF..PQFKYGrlyyeesl......RPNFPVsiGNKYSYKCDN......GFSPPSgyswDYLRCTA.....QGWEP.....EVPCVR............................................................................
CFAH_MOUSE_7   388  ...................................................................................................................................................................................................KCVF..HYVENGdsayw.........EKVYVQ..GQSLKVQCYN......GYSLQN..gqDTMTCTE.....NGWSP.....PPKCIRik..........................................................................
CFAH_MOUSE_8   447  ...................................................................................................................................................................................................TCSAsdIHIDNGflses.........SSIYAL..NRETSYRCKQ......GYVTNTgeisGSITCLQ.....NGWSP.....QPSCIK............................................................................
CFAH_MOUSE_9   508  ...................................................................................................................................................................................................SCDM..PVFENSitknt.........RTWFKL..NDKLDYECLV..gfenEYKHTK....GSITCTY.....YGWSD.....TPSCYEr...........................................................................
CFAH_MOUSE_10  568  ...................................................................................................................................................................................................ECSV..PTLDRKlvvspr........KEKYRV..GDLLEFSCHS......GHRVGP....DSVQCYH.....FGWSPg....FPTCKGqva.........................................................................
CFAH_MOUSE_11  628  ...................................................................................................................................................................................................SCAPp.LEILNGeingak........KVEYSH..GEVVKYDCKP......RFLLKG...pNKIQCVD.....GNWTT.....LPVCIEeer.........................................................................
CFAH_MOUSE_12  689  ...................................................................................................................................................................................................TCGDi.PELEHGsakcs.........VPPYHH..GDSVEFICEE......NFTMIG...hGSVSCIS.....GKWTQ.....LPKCVAtdqle.......................................................................
CFAH_MOUSE_13  751  ...................................................................................................................................................................................................KCRVl.KSTGIEaikpk.........LTEFTH..NSTMDYKCRD......KQEYER......SICIN.....GKWDP.....EPNCTSkt..........................................................................
CFAH_MOUSE_14  807  ...................................................................................................................................................................................................SCPPp.PQIPNTqviet.........TVKYLD..GEKLSVLCQD......NYLTQD...sEEMVCKD.....GRWQS.....LPRCIEki..........................................................................
CFAH_MOUSE_15  866  ...................................................................................................................................................................................................PCSQp.PTIEHGsinlprsseerrdsIESSSHehGTTFSYVCDD......GFRIPE...eNRITCYM.....GKWST.....PPRCVGl...........................................................................
CFAH_MOUSE_16  935  ...................................................................................................................................................................................................PCGPp.PSIPLGtvsle.........LESYQH..GEEVTYHCST......GFGIDG...pAFIICEG.....GKWSD.....PPKCIKt...........................................................................
CFAH_MOUSE_17  993  ...................................................................................................................................................................................................DCDVl.PTVKNAiirgks........KKSYRT..GEQVTFRCQS......PYQMNG...sDTVTCVN.....SRWIG.....QPVCKDn...........................................................................
CFAH_MOUSE_18 1052  ...................................................................................................................................................................................................SCVDp.PHVPNAtivtrt........KNKYLH..GDRVRYECNK......PLELFG...qVEVMCEN.....GIWTE.....KPKCRDstg.........................................................................
CFAH_MOUSE_19 1113  ...................................................................................................................................................................................................KCGPp.PPIDNGditsls........LPVYEP..LSSVEYQCQK......YYLLKG...kKTITCTN.....GKWSE.....PPTCLH............................................................................
CFAH_MOUSE_20 1171  ...................................................................................................................................................................................................ACVIpeNIMESHniilkwrht.....EKIYSHs.GEDIEFGCKY......GYYKARdsppFRTKCIN.....GTIN......YPTCV.............................................................................
Q91275_1        25  ..........................................................................................................................................................................mdviarscvlflwlqtltsvksqv.PCTLqqFIDGEHydsnfdttgm....EASYPG..GRQVRVGCNV......GYSG.....fFKLVCVE.....GKWETr....GAKCQPr...........................................................................
Q91275_2        88  ...................................................................................................................................................................................................SCGHp.GDAQFAdfhlae........GNDFVF..GSKVVYTCQK......GYQMVS..riNYRRCVA.....EGWDGv....VPVCESq...........................................................................
Q91275_3       149  ...................................................................................................................................................................................................QCPL..IHVDNNvqvigg........PEEATF..GNVVRFSCKS.....rSEILDG...sPELYCDEr....GDWSGp....VPKCKAi...........................................................................
Q91275_4       210  ...................................................................................................................................................................................................TCAI..PPIENGnvpga.........IREYKE..NDVLHYECDR......AFKHID....RPSTCIKqg.ikAEWSP.....TPLCESi...........................................................................
Q91275_5       270  ...................................................................................................................................................................................................KCRL..TIMDGTryepay........RNLFSP..GETLKVICAR.....tSWISTPqetsVVTTCQDn....GEWSI.....RPTCQEv...........................................................................
Q91275_6       333  ...................................................................................................................................................................................................RCSN..RRPEHVdswdvrs.......WERYTL..DDNTRYWCKR......GYKRTG..gvTWATCGR.....NGWMP.....NPLCEVk...........................................................................
Q91275_7       393  ...................................................................................................................................................................................................TCSK..ENIQDAvivgtd........KQIYNL..NQKAIYAC........GEGNRG...rITLTCGE.....NGWSG.....DRKCTVk...........................................................................
Q91275_8       449  ...................................................................................................................................................................................................PCPLp.PKDPNGff............RGPYT...GRVLYYTCKD......GYKLFTegwwAEAKCVD.....GVWPE.....LTTCISnt..........................................................................
Q91275_9       507  ...................................................................................................................................................................................................TCGKf.PEIPNAev............IRRYPE..VQTVQVICNQ......GYSTQA....NSFSCEN.....GNWLLyglspDQICTLrad.........................................................................
Q91275_10      568  ...................................................................................................................................................................................................VCGPp.PEAENAvvktsy........QREYLS..GSEVTYLCRD......KYIPLE..gvDTIRCRN.....GQWDK.....EIKCTS............................................................................
Q91275_11      627  ...................................................................................................................................................................................................SCDKl.VDVTMDftad..........KEIYIE..GQTIRYQCLI.......DGAEG.....IATCNN.....TKWVK.....SPQCKVk...........................................................................
Q91275_12      681  ...................................................................................................................................................................................................PCELp.ADIPNGqydiie........GEELVF..GTKIKYVCNE......GYQMIS..keATRTCML.....DGWSNh....VPTCEPl...........................................................................
Q91275_13      742  ...................................................................................................................................................................................................SCEPppTDGGVTviglpdn.......GNPILP..DRFLDFSCDG....sgRYLNGS....ARLICGKd....GQWDKp....FPSCEDi...........................................................................
Q91275_14      806  ...................................................................................................................................................................................................TCEIgvMPTHVSvvglppg.......TKTIKA..GQKLQLQCDN......AQPVDR...pAEIECLQt....GEWNAa....FPACGGd...........................................................................
Q91275_15      869  ...................................................................................................................................................................................................TCTLtaVPDNVRmtpraal.......KNQMRK..GQKLKFACTD......RRDTLL..gkAEVECLDn....GKWSYp....FPTCGDpl..........................................................................
Q91275_16      934  ...................................................................................................................................................................................................DCGNp.PSLDDGdvttrr........QSVYRH..GASVEYRCQA......LYTMEG...gPRKTCDN.....GEWTG.....SIRCIK............................................................................
Q91275_17      992  ...................................................................................................................................................................................................PCTVdtDIMRRHniefryshe.....AKLYATh.DDVIEFRCTS......GRHVGS..vqMRQKCLD.....GVMN......FPTCQ.............................................................................
Q92496_1        23  .............................................................................................................................................................................mlllinviltlwvscangqevkPCDF..PEIQHGglyykslr......RLYFPAaaGQSYSYYCDQ......NFVTPSgsywDYIHCTQ.....DGWLP.....TVPCLR............................................................................
Q92496_2        87  ...................................................................................................................................................................................................TCSKsdIEIENGfises.........SSIYIL..NKEIQYKCKP......GYATADgnssGSITCLQ.....NGWSA.....QPICIK............................................................................
Q92496_3       148  ...................................................................................................................................................................................................FCDM..PVFENSraksn.........GMRFKL..HDTLDYECYD......GYEISYgnttGSIVCGE.....DGWSH.....FPTCYNsse.........................................................................
Q92496_4       210  ...................................................................................................................................................................................................KCGPp.PPISNGdttsfl........LKVYVP..QSRVEYQCQS......YYELQG...sNYVTCSN.....GEWSE.....PPRCIH............................................................................
Q92496_5       268  ...................................................................................................................................................................................................PCIIteENMNKNniqlkgksd.....IKYYAKt.GDTIEFMCKL......GYNANTsvlsFQAVCRE.....GIVE......YPRCE.............................................................................
LEM1_HUMAN_1   196  mifpwkcqstqrdlwnifklwgwtmlccdflahhgtdcwtyhysekpmnwqrarrfcrdnytdlvaiqnkaeieylektlpfsrsyywigirkiggiwtwvgtnkslteeaenwgdgepnnkknkedcveiyikrnkdagkwnddachklkaalcytascqpwscsghgecveiinnytcncdvgyygpqcqfviQCEPl.EAPELGtmdcthp.......LGNFSF..SSQCAFSCSE......GTNLTG...iEETTCGPf....GNWSSp....EPTCQVi...........................................................................
LEM1_HUMAN_2   258  ...................................................................................................................................................................................................QCEPl.SAPDLGimncshp.......LASFSF..TSACTFICSE......GTELIG...kKKTICESs....GIWSNp....SPICQKl....dksfsmikegdynplfipvavmvtafsglafiiwlarrlkkgkkskrsmndpy..................

Key

alpha helix         RED
beta strand         GREEN
core blocks         UNDERSCORE
repeat              **********
Multiple alignment of repeats only
You can also look at the alignment in RSF format, or MSF format
You can also get the unaligned sequences in FASTA format
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