sushi_1_ref6 - reference 1

Back to Schema

Back to Index
Multiple alignment of complete sequences
Name                SUSHI
Number of sequences 6


Key

alpha helix         RED
beta strand         GREEN
core blocks         UNDERSCORE
repeat              **********


                    *****************************************************************************************
CR1_HUMAN_1     42  QCNAp.EWLPFArptnltd.......EFEFPI..GTYLNYECRP......GYSGRP....FSIICLKn....SVWTGa....KDRCRRk   102  
CR1_HUMAN_2    103  SCRNp.PDPVNGmvhv..........IKGIQF..GSQIKYSCTK......GYRLIG...sSSATCIIsg.dtVIWDNe....TPICDRi   164  
CR1_HUMAN_3    165  PCGLp.PTITNGdfistn........RENFHY..GSVVTYRCNPgsggrkVFELVG...ePSIYCTSnddqvGIWSGp....APQCIIp   235  
CR1_HUMAN_4    237  KCTP..PNVENGilvsdn........RSLFSL..NEVVEFRCQP......GFVMKG...pRRVKCQAl....NKWEPe....LPSCSR.   296  
CR1_HUMAN_5    296  VCQPp.PDVLHAertqrd........KDNFSP..GQEVFYSCEP......GYDLRG...aASMRCTPq....GDWSPa....APTCEVk   356  
CR1_HUMAN_6    357  SCDDfmGQLLNGrvlf..........PVNLQL..GAKVDFVCDE......GFQLKG...sSASYCVLag.meSLWNSs....VPVCEQi   419  
CR1_HUMAN_7    420  FCPSp.PVIPNGrhtgkp........LEVFPF..GKAVNYTCDPhpdrgtSFDLIG...eSTIRCTSdpqgnGVWSSp....APRCGIl   490  
CR1_HUMAN_8    492  HCQAp.DHFLFAklktqtn.......ASDFPI..GTSLKYECRP......EYYGRP....FSITCLDn....LVWSSp....KDVCKRk   552  
CR1_HUMAN_9    553  SCKTp.PDPVNGmvhv..........ITDIQV..GSRINYSCTT......GHRLIG...hSSAECILsg.naAHWSTk....PPICQRi   614  
CR1_HUMAN_10   615  PCGLp.PTIANGdfistn........RENFHY..GSVVTYRCNPgsggrkVFELVG...ePSIYCTSnddqvGIWSGp....APQCIIp   685  
CR1_HUMAN_11   687  KCTP..PNVENGilvsdn........RSLFSL..NEVVEFRCQP......GFVMKG...pRRVKCQAl....NKWEPe....LPSCSR.   746  
CR1_HUMAN_12   746  VCQPp.PDVLHAertqrd........KDNFSP..GQEVFYSCEP......GYDLRG...aASMRCTPq....GDWSPa....APTCEVk   806  
CR1_HUMAN_13   807  SCDDfmGQLLNGrvlf..........PVNLQL..GAKVDFVCDE......GFQLKG...sSASYCVLag.meSLWNSs....VPVCEQi   869  
CR1_HUMAN_14   870  FCPSp.PVIPNGrhtgkp........LEVFPF..GKAVNYTCDPhpdrgtSFDLIG...eSTIRCTSdpqgnGVWSSp....APRCGIl   940  
CR1_HUMAN_15   942  HCQAp.DHFLFAklktqtn.......ASDFPI..GTSLKYECRP......EYYGRP....FSITCLDn....LVWSSp....KDVCKRk  1002  
CR1_HUMAN_16  1003  SCKTp.PDPVNGmvhv..........ITDIQV..GSRINYSCTT......GHRLIG...hSSAECILsg.ntAHWSTk....PPICQRi  1064  
CR1_HUMAN_17  1065  PCGLp.PTIANGdfistn........RENFHY..GSVVTYRCNLgsrgrkVFELVG...ePSIYCTSnddqvGIWSGp....APQCIIp  1135  
CR1_HUMAN_18  1137  KCTP..PNVENGilvsdn........RSLFSL..NEVVEFRCQP......GFVMKG...pRRVKCQAl....NKWEPe....LPSCSR.  1196  
CR1_HUMAN_19  1196  VCQPp.PEILHGehtpsh........QDNFSP..GQEVFYSCEP......GYDLRG...aASLHCTPq....GDWSPe....APRCAVk  1256  
CR1_HUMAN_20  1257  SCDDflGQLPHGrvlf..........PLNLQL..GAKVSFVCDE......GFRLKG...sSVSHCVLvg.mrSLWNNs....VPVCEHi  1319  
CR1_HUMAN_21  1320  FCPNp.PAILNGrhtgtp........SGDIPY..GKEISYTCDPhpdrgmTFNLIG...eSTIRCTSdphgnGVWSSp....APRCELs  1390  
CR1_HUMAN_22  1395  HCKTp.EQFPFAsptipin.......DFEFPV..GTSLNYECRP......GYFGKM....FSISCLEn....LVWSSv....EDNCRRk  1455  
CR1_HUMAN_23  1456  SCGPp.PEPFNGmvhi..........NTDTQF..GSTVNYSCNE......GFRLIG...sPSTTCLVsg.nnVTWDKk....APICEIi  1517  
CR1_HUMAN_24  1518  SCEPp.PTISNGdfysnn........RTSFHN..GTVVTYQCHTgpdgeqLFELVG...eRSIYCTSkddqvGVWSSp....PPRCISt  1588  
CR1_HUMAN_25  1590  KCTA..PEVENAirvpgn........RSFFSL..TEIIRFRCQP......GFVMVG...sHTVQCQTn....GRWGPk....LPHCSR.  1649  
CR1_HUMAN_26  1649  VCQPp.PEILHGehtlsh........QDNFSP..GQEVFYSCEP......SYDLRG...aASLHCTPq....GDWSPe....APRCTVk  1709  
CR1_HUMAN_27  1710  SCDDflGQLPHGrvll..........PLNLQL..GAKVSFVCDE......GFRLKG...rSASHCVLag.mkALWNSs....VPVCEQi  1772  
CR1_HUMAN_28  1773  FCPNp.PAILNGrhtgtp........FGDIPY..GKEISYACDThpdrgmTFNLIG...eSSIRCTSdpqgnGVWSSp....APRCELs  1843  
CR1_HUMAN_29  1847  ACPHp.PKIQNGhyiggh........VSLYLP..GMTISYTCDP......GYLLVG...kGFIFCTDq....GIWSQl....DHYCKEv  1907  
CR1_HUMAN_30  1908  NCSF..PLFMNGiskelem.......KKVYHY..GDYVTLKCED......GYTLEG...sPWSQCQAd....DRWDPp....LAKCTSr  1968  
Q16744_1        42  QCNAp.EWLPFArptnltd.......EFEFPI..GTYLNYECRP......GYSGRP....FSIICLKn....SVWTGa....KDRCRRk   102  
Q16744_2       103  SCRNp.PDPVNGmvhv..........IKGIQF..GSQIKYSCTK......GYRLIG...sSSATCIIsg.dtVIWDNe....TPICDRi   164  
Q16744_3       165  PCGLp.PTITNGdfistn........RENFHY..GSVVTYRCNPgsggrkVFELVG...ePSIYCTSnddqvGIWSGp....APQCIIp   235  
Q16744_4       237  KCTP..PNVENGilvsdn........RSLFSL..NEVVEFRCQP......GFVMKG...pRRVKCQAl....NKWEPe....LPSCSR.   296  
Q16744_5       296  VCQPp.PDVLHAertqrd........KDNFSP..GQEVFYSCEP......GYDLRG...aASMRCTPq....GDWSPa....APTCEVk   356  
Q16744_6       357  SCDDfmGQLLNGrvlf..........PVNLQL..GAKVDFVCDE......GFQLKG...sSASYCVLag.meSLWNSs....VPVCEQi   419  
Q16744_7       420  FCPSp.PVIPNGrhtgkp........LEVFPF..GKAVNYTCDPhpdrgtSFDLIG...eSTIRCTSdpqgnGVWSSp....APRCGIl   490  
Q16744_8       492  HCQAp.DHFLFAklktqtn.......ASDFPI..GTSLKYECRP......EYYGRP....FSITCLDn....LVWSSp....KDVCKRk   552  
Q16744_9       553  SCKTp.PDPVNGmvhv..........ITDIQV..GSRINYSCTT......GHRLIG...hSSAECILsg.naAHWSTk....PPICQRi   614  
Q16744_10      615  PCGLp.PTIANGdfistn........RENFHY..GSVVTYRCNPgsggrkVFELVG...ePSIYCTSnddqvGIWSGp....APQCIIp   685  
Q16744_11      687  KCTP..PNVENGilvsdn........RSLFSL..NEVVEFRCQP......GFVMKG...pRRVKCQAl....NKWEPe....LPSCSR.   746  
Q16744_12      746  VCQPp.PDVLHAertqrd........KDNFSP..GQEVFYSCEP......GYDLRG...aASMRCTPq....GDWSPa....APTCEVk   806  
Q16744_13      807  SCDDfmGQLLNGrvlf..........PVNLQL..GAKVDFVCDE......GFQLKG...sSASYCVLag.meSLWNSs....VPVCEQi   869  
Q16744_14      870  FCPSp.PVIPNGrhtgkp........LEVFPF..GKAVNYTCDPhpdrgtSFDLIG...eSTIRCTSdpqgnGVWSSp....APRCGIl   940  
Q16744_15      942  HCQAp.DHFLFAklktqtn.......ASDFPI..GTSLKYECRP......EYYGRP....FSITCLDn....LVWSSp....KDVCKRk  1002  
Q16744_16     1003  SCKTp.PDPVNGmvhv..........ITDIQV..GSRINYSCTT......GHRLIG...hSSAECILsg.ntAHWSTk....PPICQRi  1064  
Q16744_17     1065  PCGLp.PTIANGdfistn........RENFHY..GSVVTYRCNPgsggrkVFELVG...ePSIYCTSnddqvGIWSGp....APQCIXp  1135  
Q16744_18     1137  KCTP..PNVENGilvsdn........RSLFSL..NEVVEFRCQP......GFVMKG...pRRVKCQAl....NKWEPe....LPSCSR.  1196  
Q16744_19     1196  VCQPp.PDVLHAertqrd........KDNFSP..GQEVFYSCEP......GYDLRG...aASMRCTPq....GDWSPa....APTCEVk  1256  
Q16744_20     1257  SCDDfmGQLLNGrvlf..........PVNLQL..GAKVDFVCDE......GFQLKG...sSASYCVLag.meSLWNSs....VPVCEQi  1319  
Q16744_21     1320  FCPSp.PVIPNGrhtgkp........LEVFPF..GKAVNYTCDPhpdrgtSFDLIG...eSTIRCTSdpqgnGVWSSp....APRCGIl  1390  
Q16744_22     1392  HCQAp.DHFLFAklktqtn.......ASDFPI..GTSLKYECRP......EYYGRP....FSITCLDn....LVWSSp....KDVCKRk  1452  
Q16744_23     1453  SCKTp.PDPVNGmvhv..........ITDIXV..GSRINYSCTT......GHRLIG...hSSAECILsg.ntAHWSTk....PPICQRi  1514  
Q16744_24     1515  PCGLp.PTIANGdfistn........RENFHY..GSVVTYRCNLgsrgrkVFELVG...ePSIYCTSnddqvGIWSGp....APQCIIp  1585  
Q16744_25     1587  KCTP..PNVENGilvsdn........RSLFSL..NEVVEFRCQP......GFVMKG...pRRVKCQAl....NKWEPe....LPSCSR.  1646  
Q16744_26     1646  VCQPp.PEILHGehtpsh........QDNFSP..GQEVFYSCEP......GYDLRG...aASLHCTPq....GDWSPe....APRCAVk  1706  
Q16744_27     1707  SCDDflGQLPHGrvlf..........PLNLQL..GAKVSFVCDE......GFRLKG...sSVSHCVLvg.mrSLWNNs....VPVCEHi  1769  
Q16744_28     1770  FCPNp.PAILNGrhtgtp........SGDIPY..GKEISYTCDPhpdrgmTFNLIG...eSTIRCTSdphgnGVWSSp....APRCELs  1840  
Q16744_29     1845  HCKTp.EQFPFAsptipin.......DFEFPV..GTSLNYECRP......GYFGKM....FSISCLEn....LVWSSv....EDNCRRk  1905  
Q16744_30     1906  SCGPp.PEPFNGmvhi..........NTDTQF..GSTVNYSCNE......GFRLIG...sPSTTCLVsg.nnVTWDKk....APICEIi  1967  
Q16744_31     1968  SCEPp.PTISNGdfysnn........RTSFHN..GTVVTYQCHTgpdgeqLFELVG...eRSIYCTSkddqvGVWSSp....PPRCISt  2038  
Q16744_32     2040  KCTA..PEVENAirvpgn........RSFFSL..TEIVRFRCQP......GFVMVG...sHTVQCQTn....GRWGPk....LPHCSR.  2099  
Q16744_33     2099  VCQPp.PEILHGehtlsh........QDNFSP..GQEVFYSCEP......SYDLRG...aASLHCTPq....GDWSPe....APRCTVk  2159  
Q16744_34     2160  SCDDflGQLPHGrvll..........PLNLQL..GAKVSFVCDE......GFRLKG...rSASHCVLag.mkALWNSs....VPVCEQi  2222  
Q16744_35     2223  FCPNp.PAILNGrhtgtp........FGDIPY..GKEISYACDThpdrgmTFNLIG...eSSIRCTSdrqgnGVWSSp....APRCELs  2293  
Q16744_36     2297  ACPDp.PKIQNGhyiggh........VSLYLP..GMTISYICDP......GYLLVG...kGFIFCTDq....GIWSQl....DHYCKEv  2357  
Q16744_37     2358  NCSF..PLFMNGiskelem.......KKVYHY..GDYVTLKCED......GYTLEG...sPWSQCQAd....DRWDPp....LAKCTSr  2418  
CFAH_MOUSE_1    20  DCKGppPRENSEilsgsws.......EQLYPE..GTQATYKCRP......GYRTLG...tIVKVCKN.....GKWVAsnp..SRICRKk    83  
CFAH_MOUSE_2    84  PCGHp.GDTPFGsfrlav........GSQFEF..GAKVVYTCDD......GYQLLG..eiDYRECGA.....DGWINd....IPLCEVv   144  
CFAH_MOUSE_3   145  KCLPv.TELENGrivsgaaet.....DQEYYF..GQVVRFECNS......GFKIEG...hKEIHCSEn....GLWSNe....KPRCVEi   208  
CFAH_MOUSE_4   209  LCTP..PRVENGdginv.........KPVYKE..NERYHYKCKH......GYVPKE...rGDAVCTG.....SGWSS.....QPFCEEk   265  
CFAH_MOUSE_5   266  RCSP..PYILNGiytph.........RIIHRS..DDEIRYECNY......GFYPVT..gsTVSKCTP.....TGWIP.....VPRCTLk   323  
CFAH_MOUSE_6   324  PCEF..PQFKYGrlyyeesl......RPNFPVsiGNKYSYKCDN......GFSPPSgyswDYLRCTA.....QGWEP.....EVPCVR.   388  
CFAH_MOUSE_7   388  KCVF..HYVENGdsayw.........EKVYVQ..GQSLKVQCYN......GYSLQN..gqDTMTCTE.....NGWSP.....PPKCIRi   445  
CFAH_MOUSE_8   447  TCSAsdIHIDNGflses.........SSIYAL..NRETSYRCKQ......GYVTNTgeisGSITCLQ.....NGWSP.....QPSCIK.   508  
CFAH_MOUSE_9   508  SCDM..PVFENSitknt.........RTWFKL..NDKLDYECLV..gfenEYKHTK....GSITCTY.....YGWSD.....TPSCYEr   567  
CFAH_MOUSE_10  568  ECSV..PTLDRKlvvspr........KEKYRV..GDLLEFSCHS......GHRVGP....DSVQCYH.....FGWSPg....FPTCKGq   625  
CFAH_MOUSE_11  628  SCAPp.LEILNGeingak........KVEYSH..GEVVKYDCKP......RFLLKG...pNKIQCVD.....GNWTT.....LPVCIEe   686  
CFAH_MOUSE_12  689  TCGDi.PELEHGsakcs.........VPPYHH..GDSVEFICEE......NFTMIG...hGSVSCIS.....GKWTQ.....LPKCVAt   746  
CFAH_MOUSE_13  751  KCRVl.KSTGIEaikpk.........LTEFTH..NSTMDYKCRD......KQEYER......SICIN.....GKWDP.....EPNCTSk   805  
CFAH_MOUSE_14  807  SCPPp.PQIPNTqviet.........TVKYLD..GEKLSVLCQD......NYLTQD...sEEMVCKD.....GRWQS.....LPRCIEk   864  
CFAH_MOUSE_15  866  PCSQp.PTIEHGsinlprsseerrdsIESSSHehGTTFSYVCDD......GFRIPE...eNRITCYM.....GKWST.....PPRCVGl   934  
CFAH_MOUSE_16  935  PCGPp.PSIPLGtvsle.........LESYQH..GEEVTYHCST......GFGIDG...pAFIICEG.....GKWSD.....PPKCIKt   992  
CFAH_MOUSE_17  993  DCDVl.PTVKNAiirgks........KKSYRT..GEQVTFRCQS......PYQMNG...sDTVTCVN.....SRWIG.....QPVCKDn  1051  
CFAH_MOUSE_18 1052  SCVDp.PHVPNAtivtrt........KNKYLH..GDRVRYECNK......PLELFG...qVEVMCEN.....GIWTE.....KPKCRDs  1110  
CFAH_MOUSE_19 1113  KCGPp.PPIDNGditsls........LPVYEP..LSSVEYQCQK......YYLLKG...kKTITCTN.....GKWSE.....PPTCLH.  1171  
CFAH_MOUSE_20 1171  ACVIpeNIMESHniilkwrht.....EKIYSHs.GEDIEFGCKY......GYYKARdsppFRTKCIN.....GTIN......YPTCV..  1235  
Q91275_1        25  PCTLqqFIDGEHydsnfdttgm....EASYPG..GRQVRVGCNV......GYSG.....fFKLVCVE.....GKWETr....GAKCQPr    87  
Q91275_2        88  SCGHp.GDAQFAdfhlae........GNDFVF..GSKVVYTCQK......GYQMVS..riNYRRCVA.....EGWDGv....VPVCESq   148  
Q91275_3       149  QCPL..IHVDNNvqvigg........PEEATF..GNVVRFSCKS.....rSEILDG...sPELYCDEr....GDWSGp....VPKCKAi   209  
Q91275_4       210  TCAI..PPIENGnvpga.........IREYKE..NDVLHYECDR......AFKHID....RPSTCIKqg.ikAEWSP.....TPLCESi   269  
Q91275_5       270  KCRL..TIMDGTryepay........RNLFSP..GETLKVICAR.....tSWISTPqetsVVTTCQDn....GEWSI.....RPTCQEv   332  
Q91275_6       333  RCSN..RRPEHVdswdvrs.......WERYTL..DDNTRYWCKR......GYKRTG..gvTWATCGR.....NGWMP.....NPLCEVk   392  
Q91275_7       393  TCSK..ENIQDAvivgtd........KQIYNL..NQKAIYAC........GEGNRG...rITLTCGE.....NGWSG.....DRKCTVk   448  
Q91275_8       449  PCPLp.PKDPNGff............RGPYT...GRVLYYTCKD......GYKLFTegwwAEAKCVD.....GVWPE.....LTTCISn   505  
Q91275_9       507  TCGKf.PEIPNAev............IRRYPE..VQTVQVICNQ......GYSTQA....NSFSCEN.....GNWLLyglspDQICTLr   565  
Q91275_10      568  VCGPp.PEAENAvvktsy........QREYLS..GSEVTYLCRD......KYIPLE..gvDTIRCRN.....GQWDK.....EIKCTS.   627  
Q91275_11      627  SCDKl.VDVTMDftad..........KEIYIE..GQTIRYQCLI.......DGAEG.....IATCNN.....TKWVK.....SPQCKVk   680  
Q91275_12      681  PCELp.ADIPNGqydiie........GEELVF..GTKIKYVCNE......GYQMIS..keATRTCML.....DGWSNh....VPTCEPl   741  
Q91275_13      742  SCEPppTDGGVTviglpdn.......GNPILP..DRFLDFSCDG....sgRYLNGS....ARLICGKd....GQWDKp....FPSCEDi   805  
Q91275_14      806  TCEIgvMPTHVSvvglppg.......TKTIKA..GQKLQLQCDN......AQPVDR...pAEIECLQt....GEWNAa....FPACGGd   868  
Q91275_15      869  TCTLtaVPDNVRmtpraal.......KNQMRK..GQKLKFACTD......RRDTLL..gkAEVECLDn....GKWSYp....FPTCGDp   932  
Q91275_16      934  DCGNp.PSLDDGdvttrr........QSVYRH..GASVEYRCQA......LYTMEG...gPRKTCDN.....GEWTG.....SIRCIK.   992  
Q91275_17      992  PCTVdtDIMRRHniefryshe.....AKLYATh.DDVIEFRCTS......GRHVGS..vqMRQKCLD.....GVMN......FPTCQ..  1054  
Q92496_1        23  PCDF..PEIQHGglyykslr......RLYFPAaaGQSYSYYCDQ......NFVTPSgsywDYIHCTQ.....DGWLP.....TVPCLR.    87  
Q92496_2        87  TCSKsdIEIENGfises.........SSIYIL..NKEIQYKCKP......GYATADgnssGSITCLQ.....NGWSA.....QPICIK.   148  
Q92496_3       148  FCDM..PVFENSraksn.........GMRFKL..HDTLDYECYD......GYEISYgnttGSIVCGE.....DGWSH.....FPTCYNs   207  
Q92496_4       210  KCGPp.PPISNGdttsfl........LKVYVP..QSRVEYQCQS......YYELQG...sNYVTCSN.....GEWSE.....PPRCIH.   268  
Q92496_5       268  PCIIteENMNKNniqlkgksd.....IKYYAKt.GDTIEFMCKL......GYNANTsvlsFQAVCRE.....GIVE......YPRCE..   332  
LEM1_HUMAN_1   196  QCEPl.EAPELGtmdcthp.......LGNFSF..SSQCAFSCSE......GTNLTG...iEETTCGPf....GNWSSp....EPTCQVi   257  
LEM1_HUMAN_2   258  QCEPl.SAPDLGimncshp.......LASFSF..TSACTFICSE......GTELIG...kKKTICESs....GIWSNp....SPICQKl   319  

Key

alpha helix         RED
beta strand         GREEN
core blocks         UNDERSCORE
repeat              **********
Multiple alignment of the complete sequences
You can also look at the alignment in RSF format, or MSF format
You can also get the unaligned sequences in FASTA format
Back to Schema

Back to Index