sushi_1_ref6 - reference 6

Back to Index

Multiple alignment of complete sequences
Multiple alignment of repeats only

Number of sequences              6

Key:

A	SUSHI repeat - type A
B	SUSHI repeat - type B
C	SUSHI repeat - type C
D	SUSHI repeat - type D
E	SUSHI repeat - type E
F	SUSHI repeat - type F
G	SUSHI repeat - type G
H	SUSHI repeat - type H
U	SUSHI repeat - type unknown

Sequence Name	# Repeats
			42	102		103	164		165	235		237	296		296	356		357	419		420	490		492	552		553	614		615	685		687	746		746	806		807	869		870	940		942	1002		1003	1064		1065	1135		1137	1196		1196	1256		1257	1319		1320	1390		1395	1455		1456	1517		1518	1588		1590	1649		1649	1709		1710	1772		1773	1843		1847	1907		1908	1968
CR1_HUMAN	30		A			B			B			B			B			B			B			A			B			B			B			B			B			B			A			B			B			B			B			B			B			A			B			B			B			B			B			B			B			B
			42	102		103	164		165	235		237	296		296	356		357	419		420	490		492	552		553	614		615	685		687	746		746	806		807	869		870	940		942	1002		1003	1064		1065	1135		1137	1196		1196	1256		1257	1319		1320	1390		1392	1452		1453	1514		1515	1585		1587	1646		1646	1706		1707	1769		1770	1840		1845	1905		1906	1967		1968	2038		2040	2099		2099	2159		2160	2222		2223	2293		2297	2357		2358	2418
Q16744	37		A			B			B			B			B			B			B			A			B			B			B			B			B			B			A			B			B			B			B			B			B			A			B			B			B			B			B			B			A			B			B			B			B			B			B			B			B
			20	83		84	144		145	208		209	265		266	323		324	388		388	445		447	508		508	567		568	625		628	686		689	746		751	805		807	864		866	934		935	992		993	1051		1052	1110		1113	1171		1171	1235
CFAH_MOUSE	20		E			B			B			B			B			B			B			B			B			B			B			B			F			B			B			B			B			B			B			G
			25	87		88	148		149	209		210	269		270	332		333	392		393	448		449	505		507	565		568	627		627	680		681	741		742	805		806	868		869	932		934	992		992	1054
Q91275	17		U			B			B			B			U			U			B			B			U			B			U			B			U			U			U			B			G
			23	87		87	148		148	207		210	268		268	332
Q92496	5		B			B			B			B			G
			196	257		258	319
LEM1_HUMAN	2		B			B

Key:

A	SUSHI repeat - type A
B	SUSHI repeat - type B
C	SUSHI repeat - type C
D	SUSHI repeat - type D
E	SUSHI repeat - type E
F	SUSHI repeat - type F
G	SUSHI repeat - type G
H	SUSHI repeat - type H
U	SUSHI repeat - type unknown

Multiple alignment of complete sequences
Multiple alignment of repeats only

Back to Index