zf_1_ref6 - reference 6

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Multiple alignment of repeats only
Name                ZincFinger
Number of sequences 5


Key

alpha helix         RED
beta strand         GREEN
core blocks         UNDERSCORE
repeat              **********


                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           *********************************                                                                                                                                                                                                                                                                                         
YADD_SCHPO_1   568  merqrseeanrrfkdlnpsslydnlskpdlggsselhtymndtsladiplfedtlasevssslisnpsknniqhlhpntsepfktssksdeydsyprtgnvptfsftelndtsvsgfgsqavfensvsplsnpsnspqafdltqgsssthnandftvnnvgsrrqsiyefnigipssnidssqflpvsraiaaseispssspqlltsflpsgsvsnpsspylqgsvgalyeadafnfvdvmsqasgtevdserfpsvdfedpsllmenqqnitgtgsfadylqppssgslgaftnaspgesntgidfdtdntnlnpsvdllsnhstpsfifenspsaefshqsspylvpnsgrtlnsenarestirsvnspfsedhadasltthvfdpisptalsnsvlnydsnnfsgtpqinvvpsspsksqsgpslpanpllqtdisitysqsaspvsgqpamnensydlqnanlcapemsptytarhrsnsagsrfdayepipqlythfshsseclsvnqdtellgkiendnsksndylsvrntrprsrslnslvgnksensssskaksesksqgNYVCtfAGCNKR.FTRAYNLKSHMnt.....Htny......................................................................................................................................................................................................................................................................................
YADD_SCHPO_2   598  .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................rPFQC..SICKKS.FARQHDKRRHEql.....Htgi......................................................................................................................................................................................................................................................................................
YADD_SCHPO_3   626  .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................kAFAC..VTCNQR.FARMDALNRHYksevgqnClrta.....tergiqvppsrktavastskqk..........................................................................................................................................................................................................................................................
Q62065_1        32  ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................maeapgspnhqelgllgegeqahvkllvnkegRYVC..MLCHKT.FKTGSILKAHMvt.....Hssr......................................................................................................................................................................................................................................................................................
Q62065_2        60  .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................kDHEC..KLCGAS.FRTKGSLIRHHrr.....Htde......................................................................................................................................................................................................................................................................................
Q62065_3        88  .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................rPYKC..AKCGKS.FRESGALTRHLksltp..Ctekirfsiskdtavgkeevpagssastvgtvtssvagdpmetspvihlvtdakgtvihevhvqmqelplgmkaltpespdseelpcssensrenllhqamqnsgivlervageesalepappsgsspqclgdgspelpllkveqietqvaseaatvp............................................................................................................................
Q62065_4       273  .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................rTHPC..PQCSET.FPTAATLEAHKrg.....Hiap......................................................................................................................................................................................................................................................................................
Q62065_5       301  .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................rPFTC..TQCGKA.FPKAYLLKNDQev.....Hvhe......................................................................................................................................................................................................................................................................................
Q62065_6       329  .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................rRFRC..GDCGKL.YKTIAHVRGHRrv.....Hsde......................................................................................................................................................................................................................................................................................
Q62065_7       357  .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................rPFPC..PQCGKR.YKTKNAQQVHFrt.....Hlee......................................................................................................................................................................................................................................................................................
Q62065_8       385  .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................kPHVC..QFCSRG.FREKGSLVRHVrh.....Htge......................................................................................................................................................................................................................................................................................
Q62065_9       413  .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................kPFKC..YKCGRG.FADDGTLNRHLrtkgg..Cllev.....eellvseespsaaatvlaedphtvlvqfssvvadtqeyiieataddtetseateiiegtqtevdshimkvvqqivhqagaghqiivqnvtmdqetalgseaaaadtitiatpeslteqvamtlasaisegtvltaragpnsteqatvtmvssedieilehggelviaspegqlevqtviv............................................................................................
O15090_1       128  ........................................................................................................................................................................................................................................................................................................................................................................................................................................................meeaslclgvssaepeaephlsgpvlngqyamsqklhqitsqlshafpelhprpnpeekppasleekahvpmsgqpmgsqmallanqlgrevdtslngrvdlqqflngqnlgimsqmsdieddarknrKYPC..PLCGKR.FRFNSILSLHMrt.....Htge......................................................................................................................................................................................................................................................................................
O15090_2       156  .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................kPFKC..PYCDHR.AAQKGNLKIHLrt.....Hklgnlgkgrgrvreenrllheleerailrdkqlkgsllqprpdlkppphaqqaplaactlalqanhsvpdvahpvpspkpasvqedavapa..............................................................................................................................................................................................
O15090_3       272  .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................aGFRC..TFCKGK.FKKREELDRHIril....H.........................................................................................................................................................................................................................................................................................
O15090_4       298  .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................kPYKC..TLCDFA.ASQEEELISHVeka....Hitaesaqgqgpngggeqsa......................................................................................................................................................................................................................................................................
O15090_5       343  .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................nEFRC..EVCGQV.FSQAWFLKGHMrk.....Hkds......................................................................................................................................................................................................................................................................................
O15090_6       371  .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................fEHCC..QICGRR.FKEPWFLKNHMkv.....Hlnklsvknkspsdpevpvpmggmsqeahanlysrylsclqsgfmtpdkaglsepsqlygkgelpmkekealgkllspissmahgvpegdkhsllgclnlvpplksscierlqaaakaaemdpvnsyqawqlmargmamehgflskehplqrnhedtlanagvlfdkekreyvlvgadgskqkmpadlvhstkvgsqrdlpskldplessrdflshglnqtleynlqgpgnmke................................................
O15090_7       629  .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................kPTEC..PDCGRV.FRTYHQVVVHSrv.....Hkrdrkgeedglhvglderrgsgsdqesqsvsrsttpgssnvteesgvggglsqtgsaqedsphpsspsssdigeeagrsagvqqpallrdrslgs..........................................................................................................................................................................................
O15090_8       749  .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................aMKDC..PYCGKT.FRTSHHLKVHLri.....Htge......................................................................................................................................................................................................................................................................................
O15090_9       777  .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................kPYKC..PHCDYA.GTQSASLKYHLer.....Hhrerqngagplsgqppnqdhkdemsskaslfirpdilrgafkglpgidfrggpasqqwtsgvlssgdhsgqatgmssevpsdalkgtdlpsksthfseigrayqsivsngvnfqgslqafmdsfvlsslkkekdmkdkaladppsmkvhgvdggeekpsgkssqrkseksqyepldlsvrpdaaslpgssvtvqdsi....................................................................................
O15090_10      999  .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................aWHGC..LFCAFT.TSSMELMALHLqan....Hlgka.....krkdntigvtvnckdqareaskmallpslqsnkdlglsnmissldsasekmaqgqlketlgeqksgawtghvdpafcnfpsdfykqfgvypgmvgsgassscpnkepdgkahseedvpilipettsknttddlsdiassedmdsskgenndeedvetepemmtkplsalskdsssdggdslqptgtsqpvqglvsplsqapekqwhsqgllqaqdplaglpkpergpqsldkpmnmlsvlrayssdglaafnglasstansgcikrpdlcgk
Q23521_1       137  ...............................................................................................................................................................................................................................................................................................................................................................................................................................................mkstysfayrtknirlflilfgpiysssgpshkvdsnaaspfsrlhpmertyikfyllnfyrfchmaaiigggprkppriirknvalkhtrkdvrddegekvkregyevqsgvltvnenhpsnfkpkklpgiandveSYPC..RFCEEKiFLTASGLEKHGrec....Hlqnlddimldinticgewkkreferlrsrdrltmdkmrhearahqlvkavlagnqptvggeqyeacticnmlvniahptameshqrahkkndelrlqlidrlgahev..............................................................................................................................................................................
Q23521_2       271  .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................qNLTC..ELCSLV.FPDDGKLRAHVtsh....Htrr......................................................................................................................................................................................................................................................................................
Q23521_3       300  .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................kKYIC..KFCGHI.SHSMSELNLHKndv....Hnytawanvpeylksrrtfyqydeeqkrlrrrtnfemademsirlpilgeisdgdta.................................................................................................................................................................................................................................
Q23521_4       382  .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................gRVTC..PECGLK.LNRPRLLFKHMerv....Hmkss.....fscmvetgglptfelevsngeifwtccdskfdnrpefiehrrlhiptqheevvvessedpndipstsqamipdedaneaaeqhnfpqmihdehgniqvllpegydlretyyiydengtkiqlvplqqpdgtidhhhlvpqfeinhegeeqiieegdemmalenaeiegevaeneydqfqmdlgndwdnmgnvqmilvneddtleeehvedvdhqiienvegdegvieingqplfd.....................................
Z142_HUMAN_1   161  .......................................................................................................................................................................................................................................................................................................................................................................................................................mtdplldsqpasstgemdglcpelllippplsnrgilgpvqspcpsrdpapiptepgcllveatateegpgnmeiivetvagtltpgapgetpapklppgerepsqeagtplpgqetaeeenvekeeksdtqkdsqkavdkgqgaqrlegdvvsgteslfkTHMC..PECKRC.FKKRTHLVEHLhl.....Hfpd......................................................................................................................................................................................................................................................................................
Z142_HUMAN_2   189  .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................pSLQC..PNCQKF.FTSKSKLKTHLlr.....Elge......................................................................................................................................................................................................................................................................................
Z142_HUMAN_3   217  .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................kAHHC..PLCHYS.AVERNALNRHMasm....Hedisnfys.................................................................................................................................................................................................................................................................................
Z142_HUMAN_4   251  .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................dTYAC..PVCREE.FRLSQALKEHLks.....Htaaaaaep.................................................................................................................................................................................................................................................................................
Z142_HUMAN_5   284  .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................lPLRCfqEGCSYA.APDRKAFIKHLket....Hgv.......................................................................................................................................................................................................................................................................................
Z142_HUMAN_6   314  .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................rAVECrhHSCPML.FATAEAMEAHHks.....H.........................................................................................................................................................................................................................................................................................
Z142_HUMAN_7   341  .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................yAFHC..PHCDFA.CSNKHLFRKHKkqg....Hpgs......................................................................................................................................................................................................................................................................................
Z142_HUMAN_8   370  .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................eELRC..TFCPFA.TFNPVAYQDHVgkm....Hahe......................................................................................................................................................................................................................................................................................
Z142_HUMAN_9   399  .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................kIHQC..PECNFA.TAHKRVLIRHMll.....Htge......................................................................................................................................................................................................................................................................................
Z142_HUMAN_10  427  .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................kPHKC..ELCDFT.CRDVSYLSKHMlt.....Hsnt......................................................................................................................................................................................................................................................................................
Z142_HUMAN_11  455  .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................kDYMC..TECGYV.TKWKHYLRVHMrk.....Hagd......................................................................................................................................................................................................................................................................................
Z142_HUMAN_12  483  .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................lRYQC..NQCSYR.CHRADQLSSHKlr.....Hqg.......................................................................................................................................................................................................................................................................................
Z142_HUMAN_13  510  .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................kSLMC..EVCAFA.CKRKYELQKHMasq....Hhpgtps...................................................................................................................................................................................................................................................................................
Z142_HUMAN_14  542  .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................pLYPC..HYCSYQ.SRHKQAVLSHEnck....Htrl......................................................................................................................................................................................................................................................................................
Z142_HUMAN_15  571  .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................rEFHC..ALCDYR.TFSNTTLLFHKrka....Hgyvpgdqawqlryasqepegamqgptpppdsepsnqlsarpegpghepgtvvdpsldqalpemseevntgrqegseaphggdlggspspaeveegsctlhlealgvelesvteppleevtetapmefrplglegpdglegpelssfegigtsdlgaeenpllekpvsepstnppsleeapnnwvgtfkttppaetaplpplpesesllkalrrqdkeqaealvlegrvqmvviqgeg............................................
Z142_HUMAN_16  834  .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................rAFRC..PHCPFI.TRREKALNLHSrtg....Cqgrr.....................................................................................................................................................................................................................................................................................
Z142_HUMAN_17  864  .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ePLLC..PECGAS.FKQQRGLSTHLlkk....Cpvllrknkglprpdspiplqpvlpgtqasedtesgkpppasqeaelllpkdaplelprepeeteeplatvsgspvppagnslpteapkkhcfdpvppagnsspteapkkhhldpvppagnssptealkkhrfeq...................................................................................................................................................
Z142_HUMAN_18 1024  .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................gKFHC..NSCPFL.CSRLSSITSHVaeg....Crggrggggkrgtpqtqpdvsplsngdsappkngstesssgdgdtvlvqkqkg.....................................................................................................................................................................................................................................
Z142_HUMAN_19 1102  .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................aRFSC..PTCPFS.CQQERALRTHQirg....Cplees....................................................................................................................................................................................................................................................................................
Z142_HUMAN_20 1133  .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................gELHC..SLCPFT.APAATALRLHQkrr....Hptaapargpr...............................................................................................................................................................................................................................................................................
Z142_HUMAN_21 1169  .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................pHLQC..GDCGFT.CKQSRCMQQHRrlk....Hegv......................................................................................................................................................................................................................................................................................
Z142_HUMAN_22 1198  .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................kPHQC..PFCDFS.TTRRYRLEAHQsr.....Htgi......................................................................................................................................................................................................................................................................................
Z142_HUMAN_23 1226  .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................gRIPC..SSCPQT.FGTNSKLRLHRlrv....Hdkt......................................................................................................................................................................................................................................................................................
Z142_HUMAN_24 1255  .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................pTHFC..PLCDYS.GYLRHDITRHVnsc....Hqgt......................................................................................................................................................................................................................................................................................
Z142_HUMAN_25 1284  .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................pAFAC..SQCEAQ.FSSETALKQHAlrr....Hpepaqpapgspaette.........................................................................................................................................................................................................................................................................
Z142_HUMAN_26 1326  .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................gPLHC..SRCGLL.CPSPASLRGHTrkq....H.........................................................................................................................................................................................................................................................................................
Z142_HUMAN_27 1352  .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................pRLEC..GACQEA.FPSRLALDEHRrqq....H.........................................................................................................................................................................................................................................................................................
Z142_HUMAN_28 1378  .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................fSHRC..QLCDFA.ARERVGLVKHYleq....Heetsaavaasdgdgdagq.......................................................................................................................................................................................................................................................................
Z142_HUMAN_29 1422  .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................pPLHC..PFCDFT.CRHQLVLDHHVkg.....Hggt......................................................................................................................................................................................................................................................................................
Z142_HUMAN_30 1450  .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................rLYKC..TDCAYS.TKNRQKITWHSri.....Htge......................................................................................................................................................................................................................................................................................
Z142_HUMAN_31 1478  .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................kPYHC..HLCPYA.CADPSRLKYHMri.....Hkee......................................................................................................................................................................................................................................................................................
Z142_HUMAN_32 1506  .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................rKYLC..PECGYK.CKWVNQLKYHMtk.....Htgl......................................................................................................................................................................................................................................................................................
Z142_HUMAN_33 1534  .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................kPYQC..PECEYC.TNRADALRVHQetr....Hrea......................................................................................................................................................................................................................................................................................
Z142_HUMAN_34 1563  .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................rAFMC..EQCGKA.FKTRFLLRTHLrk.....Hsea......................................................................................................................................................................................................................................................................................
Z142_HUMAN_35 1591  .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................kPYVC..NVCHRA.FRWAAGLRHHAlt.....Htdr......................................................................................................................................................................................................................................................................................
Z142_HUMAN_36 1619  .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................hPFFC..RLCNYK.AKQKFQVVKHVrr.....Hhpdq.....adpnqgvgkdpttptvhlhdvqledpsppapaaphtgpeg........................................................................................................................................................................................................................................

Key

alpha helix         RED
beta strand         GREEN
core blocks         UNDERSCORE
repeat              **********
Multiple alignment of repeats only
You can also look at the alignment in RSF format, or MSF format
You can also get the unaligned sequences in FASTA format
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