dead_ref6 - reference 6

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Multiple alignment of repeats only
Name                DEAD/HRDC
Number of sequences 9


Key

alpha helix         RED
beta strand         GREEN
core blocks         UNDERSCORE
repeat              **********
conserved domain    ++++++++++


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Q9U2G0_1      454  ...................madelariqqyeyrqnsnlvlsvdynltdrrgreeptgevlpitdkemrkmkmgdraikg.kapvqd..........qkkkrkkkddekaqqfgrn......vlvdnnelmgaykprtqetkqtyevilsfildalgdvprevlcgaadevlltlkndkfrd.....kekkkeveallg.pltddriavlinlskkisdfsieeen...kpegdgdiyenegvnvqfd.sdeeeddgg..........mvneikgdseeesee...eegvdtdytatlkgdghltedeqkarg...ilhprdidahwiqrsla..kyfkdpliaqqkqtevigilknaad..drdaenqlvlllgfdqfefikclrqnrlmilyct.llrqanekerlqieddmrsrp.elhpilallqetdegsvvqvekskrdaekskkaata...............aneaisagqwqag.rkmldlndltfsqgshlmsnkrcelpdgsyrrqkksyeeihvpalkprpf..aegeklvsvselpkwaqpafd..gykslnriQSRLCDSALRSKEHLLLCAPTGAGKTNVALLTMLqeignhlaedg........svkldefKIVYIAPMKSLVQEMVGSFSkrlap..fGITVGEMTg.daqmskEQFMATQVIVCTPEKYDVVTrkg.geraYNQMVRLLIIDEIHLLhdd.rgPVLESIVVRtirqmeqn...hdecRLVGLSATLpnyqdvatflrv.kpehlhffdnsyrpvpleqqyigvtek.kalkrfqamnevvydkimeha...gksqVLVFVHSRKETAKTAKAIrdaclekdtlsafmregsasteil...rteaeqaknldlkdllpygfaihhagmnrvdrtLVEDLFadrHIQVLFSTATLAWGVNLPAHTVIIKgtqiynpekgrwtelgaLDIMQMLGRAGRPQYDDR.gegilitnhselqyylslmnqqlpvesqmvsrltdmlnaevvlgtvssvseatnwlgytflfvrmlknptlygitheqaradplleqrradlihtacvlldkaglikydkrsgiiqatelgriashfyctyesmqtyn.........kllvetcsdidlfrifsmssefkllsvrdeeklelqkmaehapip..ikenldeasaktnvllqayisqlklegfalqadmvfvaqsagrlfralfeivlwrgwaglaqkvltlckmvtqrqwgslnplhqfkkipsevvrsidk...knysfdrlydldqhqlgdlikmpkmgkplfkfirqfpklemttliqpitrttmrieltitpdfkwdekvhgsa..egfwifiedtdgekilhhe.ffllkqk.fcsdehvvkmivpmf....dpmpplyyvrivsdrwigaetvlpisfrhlilpekyppptelldlqp
Q9U2G0_2     1301  ..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................lpisavtnkefqtvfaes..gfkvfnpiQTQVFRTVFESNENVIVCAPNGSGKTAIAELAVLrhfentp.................eaKAVYITPMEDMATKVYADWKrrlepa.iGHTIVLLTg.eqtmdlKLAQRGQLIISTPERWDNISrrw.kqrkSVQNVKLFIADDLHMIgas.ngAVFEVVCSRtryissql...esavRVVALSSSLtnardlgmwlgc.sasatfnfmpstrpvpldleiksfnls.hnasrfaamerpvyqaicrhagklepkpALVFVPVRRQTRPVAVALltmaladgapkrflrlaehddtfq....alladiedeslresvscgvgflhegtapkdvhIVQQLFesnAIQVCVVPRGMCYQIEMSAYLVVVMdtqfyngkyhvyedypiADMLHMVGLANRPILDSD.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
O48534_1      485  ............mtnlggggaeeqarlkqygykvnsslvlnsder...rrdthessgepeslrg.ridpksfgdrvvrgrphelderlnkskkkk.ercddlvsareskrvrlre......vsvlndtedgvyqpktketrvafeimlgliqqqlggqpldivcgaadeilavlknesvkn.....hekkveieklln.vitdqvfsqfvsigklitdyeeggdslsgkasedggldydigvale...ceedddesdld........mvqdekdeeded........vvelnktgvvqvgvaingedarqakedtslnvldidaywlqrkis..qeyeqkidaqecqelaeellkilaegndrdveikllehlqfekfslvkfllqnrlkvvwctrlargrdqeernqieeemlglgselaaivkelhakratakereekrekdikeeaqhlmdddsgvdgdrgm..rdvddldlengwlkgqrqvmdleslafnqggftrennkcelpdrsfrirgkefdevhvpwvskkfd...sneklvkisdlpewaqpafr..gmqqlnrvQSKVYGTALFKADNILLCAPTGAGKTNVAVLTILhqlglnmnpgg........tfnhgnyKIVYVAPMKALVAEVVDSLSqrlkd..fGVTVKELSg.dqsltgQEIKETQIIVTTPEKWDIITrks.gdrtYTQLVRLLIIDEIHLLddn.rgPVLESIVARtlrqiest...kehiRLVGLSATLpncddvasflrvdlknglfifdrsyrpvplgqqyiginvk.kplrrfqlmndicyqkvvava...gkhqVLIFVHSRKETAKTARAIrdtamandtlsrflkedsqsreil...kclagllknndlkellpygfaihhagltrtdreIVENQFrwgNLQVLISTATLAWGVNLPAHTVIIKgtqvynpergewmelspLDVMQMIGRAGRPQYDQQ.gegiiitgysklqyylrlmneqlpiesqfiskladqlnaeivlgtiqnareachwlgytylyvrmvrnptlygvspdalakdllleerradlihsaatildknnlikydrksghfqvtdlgriasyyyishgtiaayn.........enlkptmndielcrlfslseefkyvtvrqdekmelaklldrvpip..vketledpsakinvllqvyisklkleglsltsdmvyitqsagrllraifeivlkrgwaqlsqkalnlskmvgkrmwsvqtplwqfpgipkeilmklek...ndlvweryydlssqelgelicnpkmgrplhkyihqfpklklaahvqpisrsvlqveltvtpdfhwddkankyv..epfwiivedndgekilhhe.yflfkkr.videdhtlnftvpis....epippqyfirvvsdkwldsptvlpvsfrhlilpekyppptelldlqp
O48534_2     1332  ...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................lpvmalrnpsyetlyqd...fkhfnpvQTQVFTVLYNTSDNVVVAAPTGSGKTICAEFAILrnhlegpds...............amRVVYIAPLEAIAKEQFRDWEkkfgkg.lGLRVVELTg.etlldlKLLEKGQIIISTPEKWDALSrrw.kqrkYIQQVSLFIVDELHLIggq.ggQVLEVIVSRmryissqv...gnkiRIVALSTSLanakdlgewiga.sscgvfnfppnvrpvpleihihgvdil.sfearmqamtkptytaivqhak..nkkpAIVFVPTRKHVRLTAVDLiayshmdnmkspdfll.gnleele....pfliqiceetlketlrhgigylheglsnldqeIVTQLFeagRIQVCVMSSSLCWGTPLKAHLVVVMgthfydgrenshsdypiSNLLQMMGRGSRPLLDDA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
Q9SYP1_1      484  .............manlgggaeaharfkqyeyransslvlttdnr...prdtheptgepetlwg.kidprsfgdrvakgrpqeledklkkskkkerdvvddmvnirqskrrrlre......esvltdtddavyqpktketraayeamlgliqkqlggqppsivsgaadeilavlkndafrn.....pekkmeieklln.kienhefdqlvsigklitdfqeggdsgggranddegldddlgvavefeeneeddeesdpd........mveedddeedd...........eptrtggmqvdagindedagdanegtnlnvqdidaywlqrkis..qayeqqidpqqcqvlaeellkilaegddrvvedkllmhlqyekfslvkfllrnrlkvvwctrlaraedqeernrieeemrglgpeltaiveqlhatratakereenlqksineearrlkdetgg.dggrgr..rdvadrdsesgwvkgqrqmldleslafdqggllmankkcdlppgsyrshgkgydevhvpwvskkvd...rneklvkitempdwaqpafk..gmqqlnrvQSKVYDTALFKAENILLCAPTGAGKTNVAMLTILqqlemnrntdg........tynhgdyKIVYVAPMKALVAEVVGNLSnrlkd..yGVIVRELSg.dqsltgREIEETQIIVTTPEKWDIITrks.gdrtYTQLVRLLIIDEIHLLhdn.rgPVLESIVARtlrqiett...keniRLVGLSATLpnyedvalflrvdlkkglfkfdrsyrpvplhqqyigisvk.kplqrfqlmndlcyqkvlaga...gkhqVLIFVHSRKETSKTARAIrdtamandtlsrflkedsvtrdvl...hshedivknsdlkdilpygfaihhaglsrgdreIVETLFsqgHVQVLVSTATLAWGVNLPAHTVIIKgtqvynpekgawmelspLDVMQMLGRAGRPQYDQH.gegiiitgyselqyylslmneqlpiesqfiskladqlnaeivlgtvqnareachwlgytylyirmvrnptlyglapdalakdvvleerradlihsaatildknnlvkydrksgyfqvtdlgriasyyyithgtiatyn.........ehlkptmgdidlyrlfslsdefkyvtvrqdekmelaklldrvpip..iketleepsakinvllqayisqlkleglsltsdmvyitqsagrlvralyeivlkrgwaqlaekalnlskmvgkrmwsvqtplrqfhglsndilmqlek...kdlvweryydlsaqelgelirspkmgkplhkfihqfpkvtlsahvqpitrtvlnveltvtpdflwdekihkyv..epfwiivedndgekilhhe.yfllkkq.yidedhtlhftvpif....eplppqyfvrvvsdkwlgsetvlpvsfrhlilpekyppptelldlqp
Q9SYP1_2     1331  ...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................lpvtalrnpnyeilyqd...fkhfnpvQTQVFTVLYNTNDNVLVAAPTGSGKTICAEFAILrnhhegpda...............tmRVVYIAPLEAIAKEQFRIWEgkfgkg.lGLRVVELTg.etaldlKLLEKGQIIISTPEKWDALSrrw.kqrkYVQQVSLFIVDELHLIggq.hgPVLEVIVSRmryissqv...inkiRIVALSTSLanakdlgewiga.sshglfnfppgvrpvpleihiqgvdis.sfearmqamtkptytaivqhak..nkkpAIVFVPTRKHVRLTAVDLmayshmdnpqspdfll.gkleeld....pfveqireetlketlchgigylheglssldqeIVTQLFeagRIQVCVMSSSLCWGTPLTAHLVVVMgtqyydgrenshsdypvPDLLQMMGRASRPLLDNA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
Q9UT24_1      499  mssahpkgdskeppkhgnskekpnygqsqysysamsnlvtqadrrfvsrrda.eptgepeslvn.rvsiadmgsrariekpstlpleltqevqevrlprkdaesleigirqperekrssailkyfdsfeilkynpltdetrevydyilsfiqqylgdqspeilrsaadliiellkdsslde.....qgrkkqieevlstelpqdrfsqlvnlgnrltdytveqee...elneegvnesgvpvlfn..eadeeeeavea.........meedevaededvvletsisqeeekknienpdtevtfisadtkkvteiptvhpreidafwlqreia..kyfadavvcqektnqafealsadyd..lgelenelmsifdyehfylvqlltknrwtivsctmlkraatdeerlgveeqiraagrswilealrpgaitipddglnelnnnvvekaepapvs.............eiplsktltshkivpkhq.vdlenyvftegsrlmsnkavklpegsfrrtgkgyeeihvpapnkavl..gaderlvkikelpewshqafl..ntqslnriQSHLYPIAFGTDENILLCAPTGAGKTNVAMLCILnelqkhlredl........sfnlqnfKIVYIAPLKALVQEMVNNFSkrltp..yNIRVAELTg.dsqltkQQISETQIIVTTPEKWDIITrka.ndlsYVNLVRLVIIDEVHLLhde.rgPVLESIVARifrhqeet...leqvRLVGLSATLpnytdvasflhvdpkkglfyfdstyrpcplkqefigitek.tpfkrmqttneacyekvmqha...gknqVLIFVHSRKETAKTARFIrdkaleeetighllrsdaasreil...raeadstsdenlkdllpygfaihhagmrredrqTSEDLFadgTIQVLVSTATLAWGVNLPAHTVIIKgtqvyspekgiwtelspQDVLQMLGRAGRPQFDTY.gegiiitahselqyylslmnqqlpiesqfmrrladclnaevslgtvrsiedgvdwlgytylyvrmlrspalysvgpeydddkylvq.kradllhsaaillekckllvynrqsgtltatelgkvaasyyvthnsmaiyn.........rllmqttsfielfrvfsfsdefkhipvreeekvelakllervpip..irerldepaakinallqsyisrqrldgfalvadmvyvtqsagrimraifeislrrgwssvatlsldtckmiekrlwptmsplrqfpncpsevirrvek...kefpwqryfdldpaelgelvgvpkegrrvynmvqsfprlsveahvqpitrslvrvelvinsqfnwddhlsgts..eafwilvedvdgdrllhyeqffllkk..ykddehivnftvpll....eplppcyfikivsdrwlhsitkvplsfqrlimpekfpaptplldlqn
Q9UT24_2     1345  ...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................apvsslnnpsfislypn...fkffnkiQTQVFNSVYKTNDSVFIGAPNGSGKTVCAELALLhhwsqed.................ygTAVYIAPIQEIVDRRYEEWYgkfsdlgdGKVLVKLTg.ersqdlKLIQVADLIFCTPSQWDSLSkrw.rsmrSIQKVDFYICDELQLLggf.ygPLYEIVISRirymavql...ekniRVVGLSVSVanardlgewlgt.spqcifnfspkdrpnpltihlqsfsit.hfpslmlamskpiyrslknfis..qrksTIVFTPDRKVAKQLAFDLvtfsmadedeylfslm.....ene.....afnkvedaalqqslkhgiayiseitssndqnIVQYLYrhgLIKVLIASRDVIYSLKAKSNAVIVMgtqyydgkehryidypiSELLQMLGFTASIGSSEL.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
BRR2_YEAST_1  476  .............mtehetkdkakkireiyrydemsnkvlkvdkrfmn..tsqnpqrdaeisqp....ksmsgrisakdmgqglcnninkglkendvavektgksaslkkiqqhn.....tilnsssdfrlhyypkdpsnvetyeqilqwvtevlgndiphdliigtadifirqlkeneenedgnieerkekiqhelginidslkfnelvklmknitdy.........ethpdnsnkqavailaddeksdeeevtemsnnanvlggeindnedddeeydyndvevnskkknkralpniendiiklsdskt.sniesvpiysidefflqrklrselgykdtsviqdlsekilndietleh.npvaleqklvdllkfenislaefilknrstifwgirlaksten.eipnliekmvakglndlveqykfretthskreldsgddqpqsseakrtkfs........................npaippvidlekikfdessklmtvtkvslpegsfkrvkpqydeihipapskpvi....dyelkeitslpdwcqeafpssettslnpiQSKVFHAAFEGDSNMLICAPTGSGKTNIALLTVLkalshhynpktk.......klnlsafKIVYIAPLKALVQEQVREFQrrlaf..lGIKVAELTg.dsrlsrKQIDETQVLVSTPEKWDITTrns.nnlaIVELVRLLIIDEIHLLhdd.rgPVLESIVARtfwaskyg...qeypRIIGLSATLpnyedvgrflrv.pkeglfyfdssfrpcplsqqfcgiker.nslkklkamndacyekvlesin..egnqIIVFVHSRKETSRTATWLknkfaeenithkltkndagskqil...kteaanvldpslrkliesgigthhagltrsdrsLSEDLFadgLLQVLVCTATLAWGVNLPAHTVIIKgtdvyspekgsweqlspQDVLQMLGRAGRPRYDTF.gegiiitdqsnvqyylsvlnqqlpiesqfvsklvdnlnaevvagnikcrndavnwlaytylyvrmlaspmlykv.pdissdgqlkkfres.lvhsalcilkeqelvlydaendvieatdlgniassfyinhasmdvyn.........reldehttqidlfrifsmseefkyvsvryeekrelkqllekapip..irediddplakvnvllqsyfsqlkfegfalnsdivfihqnagrllramfeiclkrgwghptrmllnlcksattkmwptncplrqfktcpvevikrlea..stvpwgdylqletpaevgrairsekygkqvydllkrfpkmsvtcnaqpitrsvmrfnieiiadwiwdmnvhgsl..epfllmledtdgdsilyyd.vlfitpd.ivgheftlsftyelkqhnqnnlppnffltlisenwwhsefeipvsfngfklpkkfppptpllenis
BRR2_YEAST_2 1329  ...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................istselgnddfsevfe....fktfnkiQSQVFESLYNSNDSVFVGSGKGTGKTAMAELALLnhwrqn..................kgRAVYINPSGEKIDFLLSDWNkrfshl.aGGKIINKLgndpslnlKLLAKSHVLLATPVQFELLSrrw.rqrkNIQSLELMIYDDAHEIsqgvygAVYETLISRmifiatql...ekkiRFVCLSNCLanardfgewagm.tksniynfspseriepleiniqsfkdv.ehisfnfsmlqmafeasaaaag..nrnsSSVFLPSRKDCMEVASAFmkfskaiewdmlnv....eeeqiv....pyiekltdghlraplkhgvgilykgmasnderIVKRLYeygAVSVLLISKDCSAFACKTDEVIIL.gtnlydgaehkympytiNELLEMVGLASGNDSM.A.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
O75643_1       25  .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................rrqrkgyeevhvpalkpkpf..gseeqllpveklpkyaqagfe..gfktlnriQSKLYRAALETDENLLLCAPTGAGKTNVALMCMLreigkhinmdg........tinvddfKIIYIAPMRSLVQEMVGSFGkrlat..yGITVAELTg.dhqlckEEISATQIIVCTPEKWDIITrkg.gertYTQLVRLIVLDEIHLLhdd.rgPVLEALVARairniemt...qedvRLIGLSATLpnyedvatflrvdpakglfyfdnsfrpvpleqtyvgitek.kaikrfqimneivyekimeha...gknqVLVFVHSRKETGKTARAIrdmclekdtlglflregsastevl...rteaeqcknlelkdllpygfaihhagmtrvdrtLVEDLFgdkHIQVLVSTATLAWGVNLPAHTVIIKgtqvyspekgrwtelgaLDILQMLGRAGRPQYDTK.gegilitshgelqyylsllnqqlpiesqmvsklpdmlnaeivlgnvqnakdavnwlgyaylyirmlrsptlygishddlkgdplldqrrldlvhtaalmldknnlvkydkktgnfqvtelgriashyyitndtvqtyn.........qllkptlseielfrvfslssefknitvreeeklelqkllervpip..vkesieepsakinvllqafisqlklegfalmadmvyvtqsagrlmraifeivlnrgwaqltdktlnlckmidkrmwqsmcplrqfrklpeevvkkiek...knfpferlydlnhneigelirmpkmgktihkyvhlfpklelsvhlqpitrstlkveltitpdfqwdekvhgss..eafwilvedvdsevilhhe.yfllkak.yaqdehlitffvpvf....eplppqyfirvvsdrwlscetqlpvsfrhlilpekyppptelldlqp
O75643_2      872  ...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................lpvsalrnsafeslyqd..kfpffnpiQTQVFNTVYNSDDNVFVGAPTGSGKTICAEFAILrmllqns.................egRCVYITPMRLWQEQVYMDWYekfqdr.lNKKVVLLTg.etstdlKLLGKGNIIISTPEKWDILSrrw.kqrkNVQNINLFVVDEVHLIgge.ngPVLEVICSRmryissqi...erpiRIVALSSSLsnakdvahwlgc.satstfnfhpnvrpvplelhiqgfnis.htqtrllsmakpvfhaitkhs...pkkpVIVFVPSRKQTRLTAIDIlttcaadiqrqrflhc..tekdli....pyleklsdstlketllngvgylheglspmerrLVEQLFssgAIQVVVASRSLCWGMNVAAHLVIIMdtlyyngkihayvdypiYDVLQMVGHANRPLQDDE.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
P53327_1      268  ......................................................................................................................................................................................................................................msteysadssksfmiamqsmidtsqtfnldrskislpdfddelkkvqkdepnqrteltvlsqdrndwddifeefkdisfaqlqsiidsyktknavavykkig....klineaettlssnvlletvlqmvykhqkqel.ekelldflgtgnidlvslllqhrrmivatpiettilliknavnstpefltqqdirnqvlesaedaknrkln....................................patkiikyphvfrkyeagsttama.fagqkftlpvgttrmsyntheeiiipaadqasnknylytkllkisdldhfcktvf...pyetlnqiQSLVYPVAYKTNENMLICAPTGAGKTDIALLTIIntikqfsvvngenei....diqyddfKVIYVAPLKALAAEIVDKFSkklap..fNIQVRELTg.dmqltkAEILATQVIVTTPEKWDVVTrkangdndLVSKVKLLIIDEVHLLhed.rgPVIETLVARtlrqvess...qsmiRIIGLSATLpnfmdvadflgvnrqigmfyfdqsfrpkpleqqllgcrgkagsrqskenidkvaydklsemiq..rgyqVMVFVHSRKETVKSARNFiklaesnhevdlfapd.piekdky...srslvknrdkdmkeifqfgfgihhagmarsdrnLTEKMFkdgAIKVLCCTATLAWGVNLPADCVIIKgtqvydskkggfidlgiSDVIQIFGRGGRPGFGSAngtgilctsndrldhyvslitqqhpiesrfgsklvdnlnaeislgsvtnvdeaiewlgytymfvrmrknpftygidweeiandpqlyerrrkmivvaarrlhalqmivfdevsmhfiakdlgrvssdfyllnesveifn.........qmcdprateadvlsmismssefdgikfreeeskelkrlsdesvecq.igsqldtpqgkanvllqayisqtrifdsalssdsnyvaqnsvricralfligvnrrwgkfsnvmlnicksiekrlwafdhplcqfd.lpeniirrird...tkpsmehlleleadelgelvhnkkagsrlykilsrfpkinieaeifpittnvmrihialgpdfvwdsrihgda..qffwvfveesdksqilhfekfilnrr..qlnnqhemdfmipls....dplppqvvvkvvsdtwigcesthaisfqhlirpfnetlqtkllklrp
P53327_2     1121  ...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................lptsalqnp.liesiy...pfkyfnpmQTMTFYTLYNTNENAFVGSPTGSGKTIVAELAIWhafktfp.................gkKIVYIAPMKALVRERVDDWRkkitpv.tGDKVVELTg.dslpdpKDVHDATIVITTPEKFDGISrnw.qtrkFVQDVSLIIMDEIHLLasd.rgPILEMIVSRmnyissqt...kqpvRLLGMSTAVsnaydmagwlgv.kdhglynfpssvrpvplkmyidgfpdnlafcplmktmnkpvfmaikqhs...pdkpALIFVASRRQTRLTALDLihlcgmednprrflni.ddeeelq....yylsqvtddtlklslqfgiglhhaglvqkdrsISHQLFqknKIQILIATSTLAWGVNLPAHLVIIKgtqffdakiegyrdmdlTDILQMMGRAGRPAYDTT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
O60072_1      257  ....................................................................................................................................................................................................................................................mevelnyvvnhleklgpasfcdtpysfslsdsnaelgalslkvdeilktnynlinpedvtdsdnnefa.....lk...dltwlqnccneisqsssteldasvlfeavimslkatedqcaiqedllnlvgldhidlis....divanssnlieeymnqndtsiaaqlsdgytseagssathgqglldslksrprrfsrsrdnrgplft......................gqqvfevekyphvygdk..rlgntis.vigkkfalpagseredyqkyeeiivphaqrapq..mqgeklleissmdilcrktfl..syqtlnriQSLVYPIAYKTNENMLICAPTGAGKTDVALLAMLqtisnyvesmnlmdesepldvhrddfKIVYIAPMKALAAEVVEKMGkrlaw..lGLKTRELTg.dmqltkTEIAETQILVTTPEKWDVVTrksvgdtqLAEKVRLVIIDEVHMLhde.rgAVIESLVARtqrlvets...qqmiRIVGLSATLpnyldvadflgvnrykglfyfssafrpcpieqhfigakg..spkivnsnideacfdkvlkliq..eghqVMIFVHSRKETINSAKKLreqffhegeadlldns.qhekysla..qrdvsksknkelkelfkysmgihnagmlrsdrhLTERLFsmgILKILCCTATLAWGVNLPAYAVLIKgtqlydpqkgsfvdlgvLDVLQIFGRAGRPQFESS.avayiitthdklshyisvvtqqspiesrftdrlvdnlnaevslgtvtnideavswlgytylyirmrrnplvygiaydelvedpllgskrrelvsvaagrladnqmivynkkngylipkdlgriasnyyinyqtvstln.........nllkskmseadiiallsqcsefsqiksrenehreleslmensspcq.lrdsisntsgkvnvilqsyisrahvedftltsdtnyvaqnagritralfeiamsrtwa.saftilslnksidrrqwsfehpllqfd.lphdlavkven.qcgslsleelsdmstgelgdlihnrkmgptvkkfisklpllninvdllpltknvlrlvlnitpnfnwdmryhgns..qmfwifvedsngleilhheqlllnkr..nvstshllsftipvs....nplpsqlyiiavsdkwlgaetvtpvslsnvvfhddsnpitelldlqp
O60072_2     1114  ...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................lpitalhdp.vlegicak.rfsffnavQTQFFHTIYHTDTNIFVGAPTGSGKTMAAELATWralhnyp.................ksKVVYIAPMKALVKERVKDWGhrlvep.mGISMIELTg.dtnpdvKAVTNANIIITTPEKWDGITrsw.ksrkYVQDVSLIILDEIHLLgsd.rgPVLEMIVSRmnyvasqt...nkkvRVLGLSTAVanandlanwlni..rdglfnfrhsvrpvpleiyidgfpgr.aycprmmsmnkpafqaikths...ptqpVLIFVSSRRQTRLTAKDLiafcglednprrflym..deeele....mivsevedkslklalpfgialhhagltendrkISEELFvnnKVQILIATSTLAWGVNTPAHLVIVKgteyydakiggykdmdlTDVLQMLGRAGRPQFDNS.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
Q9XWI5_1       72  .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................mkwkpslvaggprieeiypyvfdarlqnvghtmfdingmkfalpegskrdtfkthesvyvppsnkgd...iekiqhvyvkdmdelgqkgfk..gfeklnviQSIVFEQAYKTKENLLICAPTGAGKTNIAMLTILntihehqnsrg........dimkddfKIIYIAPMKALATEMTESFGkrlap..lGLKVKELTg.dtqlsrNEVADTQMLVLTPEKWDVITrkstsdnsLINVVRLLIIDEVHLLhde.rgPVIETLVARtlrqvems...qsgiRIVGLSATLpnfidvarflrvnpykglfffdgrfrpvpltqkfigtrkagnfrdnltlmdnvcydevvdfvk..rghqVLVFVHTRNGTAKLGEAFcarasvlgqmdlflpkdrasskyiqadkainicrnraqisplfqrgmgihhaglcrqdriLMERCFaegHVSVLFCTATLAWGVNLPAHAVVIKgtdvfdaekgvftdlgvLDVQQIFGRAGRPQFENE.ghgiiittrdkidkyltmlvhqnpiesqfyarlhdnlnaevalgtvstvdegvewltytymytralknpmaygiaynaierdpnlrdhfgnvireaamqldqnkmirfdmateylnstdlgriasnfyvkyetiqllneaekgvglpvtftsfmpddmviglismstefanlkcreeeigdleelmsygcmmnvrggglasvagkvnvllqslisrtstrnsalmseqlyvqqnagrlcramfemvlkngwsqaanaflgiakcvekqmwmnqcalrqfiqiinipitwiekierkkaresdllelsakdlgymf..scdgdrlytylrylprmdvqakfkpitytivqvevtltptfiwndqihgksgqqsfylvlenlnenliihqerigigkmkvnrqetqnlvftipiv...dcqltnnfqlrlaseyfvtddvvvpmslhncilpksfkshtdlldlep
Q9XWI5_2      942  ...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................lpiktlkns.kfeaiy...nfdyfnpiQAQVFFCLYKTDKSALIGAPTGSGKTLCAELAMFrllqdhp.................gmKVVYIAPLKSLVRERVDDWKkkfedg.mGYRVVEVSg.dvtpdpEELAASSILITTPEKWDGISrsw.atreYVRRVGLIVLDEVHLLgvd.rgAVLEAIVSRlkmitrrshvteepvRLLGLSTALanagdvaewlgi.pdeacynfrpsvrpvpisvhiqgfpgq.hycprmglmnkpaykailtys...prkpVLIFVSSRRQTRLTALAFvnlliadhnpkqwlnm..dmlele....dlmaaikdenlkltlpfgigmhhaglsaheraIVEQLFiekKIQVLIATATLAWGINCPAHLVIVKgteyfdgkkgkyvdfpvTDVLQMMGRAGRPQFDDS.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................

Key

alpha helix         RED
beta strand         GREEN
core blocks         UNDERSCORE
repeat              **********
conserved domain    ++++++++++
Multiple alignment of repeats only
You can also look at the alignment in RSF format, or MSF format
You can also get the unaligned sequences in FASTA format
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