dead_ref6 - reference 1

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Multiple alignment of complete sequences
Name                DEAD
Number of sequences 9


Key

alpha helix         RED
beta strand         GREEN
core blocks         UNDERSCORE
repeat              **********


                   **********************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************
Q9U2G0_1      454  klvsvselpkwaqpafd..gykslnriQSRLCDSALRSKEHLLLCAPTGAGKTNVALLTMLqeignhlaedg........svkldefKIVYIAPMKSLVQEMVGSFSkrlap..fGITVGEMTg.daqmskEQFMATQVIVCTPEKYDVVTrkg.geraYNQMVRLLIIDEIHLLhdd.rgPVLESIVVRtirqmeqn...hdecRLVGLSATLpnyqdvatflrv.kpehlhffdnsyrpvpleqqyigvtek.kalkrfqamnevvydkimeha...gksqVLVFVHSRKETAKTAKAIrdaclekdtlsafmregsasteil...rteaeqaknldlkdllpygfaihhagmnrvdrtLVEDLFadrHIQVLFSTATLAWGVNLPAHTVIIKgtqiynpekgrwtelgaLDIMQMLGRAGRPQYDDR   857  
Q9U2G0_2     1301  pisavtnkefqtvfaes..gfkvfnpiQTQVFRTVFESNENVIVCAPNGSGKTAIAELAVLrhfentp.................eaKAVYITPMEDMATKVYADWKrrlepa.iGHTIVLLTg.eqtmdlKLAQRGQLIISTPERWDNISrrw.kqrkSVQNVKLFIADDLHMIgas.ngAVFEVVCSRtryissql...esavRVVALSSSLtnardlgmwlgc.sasatfnfmpstrpvpldleiksfnls.hnasrfaamerpvyqaicrhagklepkpALVFVPVRRQTRPVAVALltmaladgapkrflrlaehddtfq....alladiedeslresvscgvgflhegtapkdvhIVQQLFesnAIQVCVVPRGMCYQIEMSAYLVVVMdtqfyngkyhvyedypiADMLHMVGLANRPILDSD  1698  
O48534_1      485  klvkisdlpewaqpafr..gmqqlnrvQSKVYGTALFKADNILLCAPTGAGKTNVAVLTILhqlglnmnpgg........tfnhgnyKIVYVAPMKALVAEVVDSLSqrlkd..fGVTVKELSg.dqsltgQEIKETQIIVTTPEKWDIITrks.gdrtYTQLVRLLIIDEIHLLddn.rgPVLESIVARtlrqiest...kehiRLVGLSATLpncddvasflrvdlknglfifdrsyrpvplgqqyiginvk.kplrrfqlmndicyqkvvava...gkhqVLIFVHSRKETAKTARAIrdtamandtlsrflkedsqsreil...kclagllknndlkellpygfaihhagltrtdreIVENQFrwgNLQVLISTATLAWGVNLPAHTVIIKgtqvynpergewmelspLDVMQMIGRAGRPQYDQQ   889  
O48534_2     1332  lpvmalrnpsyetlyqd...fkhfnpvQTQVFTVLYNTSDNVVVAAPTGSGKTICAEFAILrnhlegpds...............amRVVYIAPLEAIAKEQFRDWEkkfgkg.lGLRVVELTg.etlldlKLLEKGQIIISTPEKWDALSrrw.kqrkYIQQVSLFIVDELHLIggq.ggQVLEVIVSRmryissqv...gnkiRIVALSTSLanakdlgewiga.sscgvfnfppnvrpvpleihihgvdil.sfearmqamtkptytaivqhak..nkkpAIVFVPTRKHVRLTAVDLiayshmdnmkspdfll.gnleele....pfliqiceetlketlrhgigylheglsnldqeIVTQLFeagRIQVCVMSSSLCWGTPLKAHLVVVMgthfydgrenshsdypiSNLLQMMGRGSRPLLDDA  1727  
Q9SYP1_1      484  klvkitempdwaqpafk..gmqqlnrvQSKVYDTALFKAENILLCAPTGAGKTNVAMLTILqqlemnrntdg........tynhgdyKIVYVAPMKALVAEVVGNLSnrlkd..yGVIVRELSg.dqsltgREIEETQIIVTTPEKWDIITrks.gdrtYTQLVRLLIIDEIHLLhdn.rgPVLESIVARtlrqiett...keniRLVGLSATLpnyedvalflrvdlkkglfkfdrsyrpvplhqqyigisvk.kplqrfqlmndlcyqkvlaga...gkhqVLIFVHSRKETSKTARAIrdtamandtlsrflkedsvtrdvl...hshedivknsdlkdilpygfaihhaglsrgdreIVETLFsqgHVQVLVSTATLAWGVNLPAHTVIIKgtqvynpekgawmelspLDVMQMLGRAGRPQYDQH   888  
Q9SYP1_2     1331  lpvtalrnpnyeilyqd...fkhfnpvQTQVFTVLYNTNDNVLVAAPTGSGKTICAEFAILrnhhegpda...............tmRVVYIAPLEAIAKEQFRIWEgkfgkg.lGLRVVELTg.etaldlKLLEKGQIIISTPEKWDALSrrw.kqrkYVQQVSLFIVDELHLIggq.hgPVLEVIVSRmryissqv...inkiRIVALSTSLanakdlgewiga.sshglfnfppgvrpvpleihiqgvdis.sfearmqamtkptytaivqhak..nkkpAIVFVPTRKHVRLTAVDLmayshmdnpqspdfll.gkleeld....pfveqireetlketlchgigylheglssldqeIVTQLFeagRIQVCVMSSSLCWGTPLTAHLVVVMgtqyydgrenshsdypvPDLLQMMGRASRPLLDNA  1726  
Q9UT24_1      499  rlvkikelpewshqafl..ntqslnriQSHLYPIAFGTDENILLCAPTGAGKTNVAMLCILnelqkhlredl........sfnlqnfKIVYIAPLKALVQEMVNNFSkrltp..yNIRVAELTg.dsqltkQQISETQIIVTTPEKWDIITrka.ndlsYVNLVRLVIIDEVHLLhde.rgPVLESIVARifrhqeet...leqvRLVGLSATLpnytdvasflhvdpkkglfyfdstyrpcplkqefigitek.tpfkrmqttneacyekvmqha...gknqVLIFVHSRKETAKTARFIrdkaleeetighllrsdaasreil...raeadstsdenlkdllpygfaihhagmrredrqTSEDLFadgTIQVLVSTATLAWGVNLPAHTVIIKgtqvyspekgiwtelspQDVLQMLGRAGRPQFDTY   903  
Q9UT24_2     1345  apvsslnnpsfislypn...fkffnkiQTQVFNSVYKTNDSVFIGAPNGSGKTVCAELALLhhwsqed.................ygTAVYIAPIQEIVDRRYEEWYgkfsdlgdGKVLVKLTg.ersqdlKLIQVADLIFCTPSQWDSLSkrw.rsmrSIQKVDFYICDELQLLggf.ygPLYEIVISRirymavql...ekniRVVGLSVSVanardlgewlgt.spqcifnfspkdrpnpltihlqsfsit.hfpslmlamskpiyrslknfis..qrksTIVFTPDRKVAKQLAFDLvtfsmadedeylfslm.....ene.....afnkvedaalqqslkhgiayiseitssndqnIVQYLYrhgLIKVLIASRDVIYSLKAKSNAVIVMgtqyydgkehryidypiSELLQMLGFTASIGSSEL  1734  
BRR2_YEAST_1  476  elkeitslpdwcqeafpssettslnpiQSKVFHAAFEGDSNMLICAPTGSGKTNIALLTVLkalshhynpktk.......klnlsafKIVYIAPLKALVQEQVREFQrrlaf..lGIKVAELTg.dsrlsrKQIDETQVLVSTPEKWDITTrns.nnlaIVELVRLLIIDEIHLLhdd.rgPVLESIVARtfwaskyg...qeypRIIGLSATLpnyedvgrflrv.pkeglfyfdssfrpcplsqqfcgiker.nslkklkamndacyekvlesin..egnqIIVFVHSRKETSRTATWLknkfaeenithkltkndagskqil...kteaanvldpslrkliesgigthhagltrsdrsLSEDLFadgLLQVLVCTATLAWGVNLPAHTVIIKgtdvyspekgsweqlspQDVLQMLGRAGRPRYDTF   883  
BRR2_YEAST_2 1329  istselgnddfsevfe....fktfnkiQSQVFESLYNSNDSVFVGSGKGTGKTAMAELALLnhwrqn..................kgRAVYINPSGEKIDFLLSDWNkrfshl.aGGKIINKLgndpslnlKLLAKSHVLLATPVQFELLSrrw.rqrkNIQSLELMIYDDAHEIsqgvygAVYETLISRmifiatql...ekkiRFVCLSNCLanardfgewagm.tksniynfspseriepleiniqsfkdv.ehisfnfsmlqmafeasaaaag..nrnsSSVFLPSRKDCMEVASAFmkfskaiewdmlnv....eeeqiv....pyiekltdghlraplkhgvgilykgmasnderIVKRLYeygAVSVLLISKDCSAFACKTDEVIIL.gtnlydgaehkympytiNELLEMVGLASGNDSM.A  1717  
O75643_1       25  qllpveklpkyaqagfe..gfktlnriQSKLYRAALETDENLLLCAPTGAGKTNVALMCMLreigkhinmdg........tinvddfKIIYIAPMRSLVQEMVGSFGkrlat..yGITVAELTg.dhqlckEEISATQIIVCTPEKWDIITrkg.gertYTQLVRLIVLDEIHLLhdd.rgPVLEALVARairniemt...qedvRLIGLSATLpnyedvatflrvdpakglfyfdnsfrpvpleqtyvgitek.kaikrfqimneivyekimeha...gknqVLVFVHSRKETGKTARAIrdmclekdtlglflregsastevl...rteaeqcknlelkdllpygfaihhagmtrvdrtLVEDLFgdkHIQVLVSTATLAWGVNLPAHTVIIKgtqvyspekgrwtelgaLDILQMLGRAGRPQYDTK   429  
O75643_2      872  lpvsalrnsafeslyqd..kfpffnpiQTQVFNTVYNSDDNVFVGAPTGSGKTICAEFAILrmllqns.................egRCVYITPMRLWQEQVYMDWYekfqdr.lNKKVVLLTg.etstdlKLLGKGNIIISTPEKWDILSrrw.kqrkNVQNINLFVVDEVHLIgge.ngPVLEVICSRmryissqi...erpiRIVALSSSLsnakdvahwlgc.satstfnfhpnvrpvplelhiqgfnis.htqtrllsmakpvfhaitkhs...pkkpVIVFVPSRKQTRLTAIDIlttcaadiqrqrflhc..tekdli....pyleklsdstlketllngvgylheglspmerrLVEQLFssgAIQVVVASRSLCWGMNVAAHLVIIMdtlyyngkihayvdypiYDVLQMVGHANRPLQDDE  1264  
P53327_1      268  kllkisdldhfcktvf...pyetlnqiQSLVYPVAYKTNENMLICAPTGAGKTDIALLTIIntikqfsvvngenei....diqyddfKVIYVAPLKALAAEIVDKFSkklap..fNIQVRELTg.dmqltkAEILATQVIVTTPEKWDVVTrkangdndLVSKVKLLIIDEVHLLhed.rgPVIETLVARtlrqvess...qsmiRIIGLSATLpnfmdvadflgvnrqigmfyfdqsfrpkpleqqllgcrgkagsrqskenidkvaydklsemiq..rgyqVMVFVHSRKETVKSARNFiklaesnhevdlfapd.piekdky...srslvknrdkdmkeifqfgfgihhagmarsdrnLTEKMFkdgAIKVLCCTATLAWGVNLPADCVIIKgtqvydskkggfidlgiSDVIQIFGRGGRPGFGSA   677  
P53327_2     1121  lptsalqnp.liesiy...pfkyfnpmQTMTFYTLYNTNENAFVGSPTGSGKTIVAELAIWhafktfp.................gkKIVYIAPMKALVRERVDDWRkkitpv.tGDKVVELTg.dslpdpKDVHDATIVITTPEKFDGISrnw.qtrkFVQDVSLIIMDEIHLLasd.rgPILEMIVSRmnyissqt...kqpvRLLGMSTAVsnaydmagwlgv.kdhglynfpssvrpvplkmyidgfpdnlafcplmktmnkpvfmaikqhs...pdkpALIFVASRRQTRLTALDLihlcgmednprrflni.ddeeelq....yylsqvtddtlklslqfgiglhhaglvqkdrsISHQLFqknKIQILIATSTLAWGVNLPAHLVIIKgtqffdakiegyrdmdlTDILQMMGRAGRPAYDTT  1513  
O60072_1      257  klleissmdilcrktfl..syqtlnriQSLVYPIAYKTNENMLICAPTGAGKTDVALLAMLqtisnyvesmnlmdesepldvhrddfKIVYIAPMKALAAEVVEKMGkrlaw..lGLKTRELTg.dmqltkTEIAETQILVTTPEKWDVVTrksvgdtqLAEKVRLVIIDEVHMLhde.rgAVIESLVARtqrlvets...qqmiRIVGLSATLpnyldvadflgvnrykglfyfssafrpcpieqhfigakg..spkivnsnideacfdkvlkliq..eghqVMIFVHSRKETINSAKKLreqffhegeadlldns.qhekysla..qrdvsksknkelkelfkysmgihnagmlrsdrhLTERLFsmgILKILCCTATLAWGVNLPAYAVLIKgtqlydpqkgsfvdlgvLDVLQIFGRAGRPQFESS   670  
O60072_2     1114  lpitalhdp.vlegicak.rfsffnavQTQFFHTIYHTDTNIFVGAPTGSGKTMAAELATWralhnyp.................ksKVVYIAPMKALVKERVKDWGhrlvep.mGISMIELTg.dtnpdvKAVTNANIIITTPEKWDGITrsw.ksrkYVQDVSLIILDEIHLLgsd.rgPVLEMIVSRmnyvasqt...nkkvRVLGLSTAVanandlanwlni..rdglfnfrhsvrpvpleiyidgfpgr.aycprmmsmnkpafqaikths...ptqpVLIFVSSRRQTRLTAKDLiafcglednprrflym..deeele....mivsevedkslklalpfgialhhagltendrkISEELFvnnKVQILIATSTLAWGVNTPAHLVIVKgteyydakiggykdmdlTDVLQMLGRAGRPQFDNS  1505  
Q9XWI5_1       72  qhvyvkdmdelgqkgfk..gfeklnviQSIVFEQAYKTKENLLICAPTGAGKTNIAMLTILntihehqnsrg........dimkddfKIIYIAPMKALATEMTESFGkrlap..lGLKVKELTg.dtqlsrNEVADTQMLVLTPEKWDVITrkstsdnsLINVVRLLIIDEVHLLhde.rgPVIETLVARtlrqvems...qsgiRIVGLSATLpnfidvarflrvnpykglfffdgrfrpvpltqkfigtrkagnfrdnltlmdnvcydevvdfvk..rghqVLVFVHTRNGTAKLGEAFcarasvlgqmdlflpkdrasskyiqadkainicrnraqisplfqrgmgihhaglcrqdriLMERCFaegHVSVLFCTATLAWGVNLPAHAVVIKgtdvfdaekgvftdlgvLDVQQIFGRAGRPQFENE   482  
Q9XWI5_2      942  lpiktlkns.kfeaiy...nfdyfnpiQAQVFFCLYKTDKSALIGAPTGSGKTLCAELAMFrllqdhp.................gmKVVYIAPLKSLVRERVDDWKkkfedg.mGYRVVEVSg.dvtpdpEELAASSILITTPEKWDGISrsw.atreYVRRVGLIVLDEVHLLgvd.rgAVLEAIVSRlkmitrrshvteepvRLLGLSTALanagdvaewlgi.pdeacynfrpsvrpvpisvhiqgfpgq.hycprmglmnkpaykailtys...prkpVLIFVSSRRQTRLTALAFvnlliadhnpkqwlnm..dmlele....dlmaaikdenlkltlpfgigmhhaglsaheraIVEQLFiekKIQVLIATATLAWGINCPAHLVIVKgteyfdgkkgkyvdfpvTDVLQMMGRAGRPQFDDS  1335  

Key

alpha helix         RED
beta strand         GREEN
core blocks         UNDERSCORE
repeat              **********
Multiple alignment of the complete sequences
You can also look at the alignment in RSF format, or MSF format
You can also get the unaligned sequences in FASTA format
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