lrr_ref6 - reference 1

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Multiple alignment of complete sequences
Name                LRR
Number of sequences 15


Key

alpha helix         RED
beta strand         GREEN
core blocks         UNDERSCORE
repeat              **********


                    ******************************
ALS_HUMAN_01    75  GTQALWLDGNN.L.....ssvppaafqnls    98  
ALS_HUMAN_02    99  SLGFLNLQGGQ.L.....gslepqallgle   122  
ALS_HUMAN_03   123  NLCHLHLERNQ.L.....rslalgtfahtp   146  
ALS_HUMAN_04   147  ALASLGLSNNR.L.....srledglfeglg   170  
ALS_HUMAN_05   171  SLWDLNLGWNS.L.....avlpdaafrglg   194  
ALS_HUMAN_06   195  SLRELVLAGNR.L.....aylqpalfsgla   218  
ALS_HUMAN_07   219  ELRELDLSRNA.L.....raikanvfvqlp   242  
ALS_HUMAN_08   243  RLQKLYLDRNL.I.....aavapgaflglk   266  
ALS_HUMAN_09   267  ALRWLDLSHNR.V.....aglledtfpgll   290  
ALS_HUMAN_10   291  GLRVLRLSHNA.I.....aslrprtfkdlh   314  
ALS_HUMAN_11   315  FLEELQLGHNR.I.....rqlaersfeglg   338  
ALS_HUMAN_12   339  QLEVLTLDHNQ.L.....qevkagaflglt   362  
ALS_HUMAN_13   363  NVAVMNLSGNC.L.....rnlpeqvfrglg   386  
ALS_HUMAN_14   387  KLHSLHLEGSC.L.....grirphtftgls   410  
ALS_HUMAN_15   411  GLRRLFLKDNG.L.....vgieeqslwgla   434  
ALS_HUMAN_16   435  ELLELDLTSNQ.L.....thlphrlfqglg   458  
ALS_HUMAN_17   459  KLEYLLLSRNR.L.....aelpadalgplq   482  
ALS_HUMAN_18   483  RAFWLDVSHNR.L.....ealpnsllaplg   506  
ALS_HUMAN_19   507  RLRYLSLRNNS.L.....rtftpqpp.gle   529  
ALS_MOUSE_01    75  STRALWLDGNN.L.....ssipsaafqnls    98  
ALS_MOUSE_02    99  SLDFLNLQGSW.L.....rslepqallglq   122  
ALS_MOUSE_03   123  NLYHLHLERNL.L.....rslaaglfrhtp   146  
ALS_MOUSE_04   147  SLASLSLGNNL.L.....grleeglfrgls   170  
ALS_MOUSE_05   171  HLWDLNLGWNS.L.....vvlpdtvfqglg   194  
ALS_MOUSE_06   195  NLHELVLAGNK.L.....tylqpallcglg   218  
ALS_MOUSE_07   219  ELRELDLSRNA.L.....rsvkanvfihlp   242  
ALS_MOUSE_08   243  RLQKLYLDRNL.I.....tavapraflgmk   266  
ALS_MOUSE_09   267  ALRWLDLSHNR.V.....aglledtfpgll   290  
ALS_MOUSE_10   291  GLHVLRLAHNA.I.....tslrprtfkdlh   314  
ALS_MOUSE_11   315  FLEELQLGHNR.I.....rqlgektfeglg   338  
ALS_MOUSE_12   339  QLEVLTLNDNQ.I.....hevkvgaffglf   362  
ALS_MOUSE_13   363  NVAVMNLSGNC.L.....rslpehvfqglg   386  
ALS_MOUSE_14   387  RLHSLHLEHSC.L.....grirlhtfagls   410  
ALS_MOUSE_15   411  GLRRLFLRDNS.I.....ssieeqslagls   434  
ALS_MOUSE_16   435  ELLELDLTANQ.L.....thlprqlfqglg   458  
ALS_MOUSE_17   459  QLEYLLLSNNQ.L.....tmlsedvlgplq   482  
ALS_MOUSE_18   483  RAFWLDLSHNR.L.....etpaeglfsslg   506  
ALS_MOUSE_19   507  RLRYLNLRNNS.L.....qtfvpqp..gle   528  
ALS_PAPPA_01    75  GTQALWLDSNN.L.....ssippaafrnls    98  
ALS_PAPPA_02    99  SLAFLNLQGGQ.L.....gslepqallgle   122  
ALS_PAPPA_03   123  NLCHLHLERNQ.L.....rslavgtfaytp   146  
ALS_PAPPA_04   147  ALALLGLSNNR.L.....srledglfeglg   170  
ALS_PAPPA_05   171  NLWDLNLGWNS.L.....avlpdaafrglg   194  
ALS_PAPPA_06   195  GLRELVLAGNR.L.....aylqpalfsgla   218  
ALS_PAPPA_07   219  ELRELDLSRNA.L.....raikanvfaqlp   242  
ALS_PAPPA_08   243  RLQKLYLDRNL.I.....aavapgaflglk   266  
ALS_PAPPA_09   267  ALRWLDLSHNR.V.....aglledtfpgll   290  
ALS_PAPPA_10   291  GLRVLRLSHNA.I.....aslrprtfedlh   314  
ALS_PAPPA_11   315  FLEELQLGHNR.I.....rqlaersfeglg   338  
ALS_PAPPA_12   339  QLEVLTLDHNQ.L.....qevkvgaflglt   362  
ALS_PAPPA_13   363  NVAVMNLSGNC.L.....rnlpeqvfrglg   386  
ALS_PAPPA_14   387  KLHSLHLEGSC.L.....grirphtfagls   410  
ALS_PAPPA_15   411  GLRRLFLKDNG.L.....vgieeqslwgla   434  
ALS_PAPPA_16   435  ELLELDLTSNQ.L.....thlphqlfqglg   458  
ALS_PAPPA_17   459  KLEYLLLSHNR.L.....aelpadalgplq   482  
ALS_PAPPA_18   483  RAFWLDVSHNR.L.....ealpgsllaslg   506  
ALS_PAPPA_19   507  RLRYLNLRNNS.L.....rtftpqpp.gle   529  
ALS_RAT_01      75  STRALWLDGNN.L.....ssipsaafqnls    98  
ALS_RAT_02      99  SLDFLNLQGSW.L.....rslepqallglq   122  
ALS_RAT_03     123  NLYYLHLERNR.L.....rnlavglfthtp   146  
ALS_RAT_04     147  SLASLSLSSNL.L.....grleeglfqgls   170  
ALS_RAT_05     171  HLWDLNLGWNS.L.....vvlpdtvfqglg   194  
ALS_RAT_06     195  NLHELVLAGNK.L.....tylqpalfcglg   218  
ALS_RAT_07     219  ELRELDLSRNA.L.....rsvkanvfvhlp   242  
ALS_RAT_08     243  RLQKLYLDRNL.I.....tavapgaflgmk   266  
ALS_RAT_09     267  ALRWLDLSHNR.V.....aglmedtfpgll   290  
ALS_RAT_10     291  GLHVLRLAHNA.I.....aslrprtfkdlh   314  
ALS_RAT_11     315  FLEELQLGHNR.I.....rqlgertfeglg   338  
ALS_RAT_12     339  QLEVLTLNDNQ.I.....tevrvgafsglf   362  
ALS_RAT_13     363  NVAVMNLSGNC.L.....rslpervfqgld   386  
ALS_RAT_14     387  KLHSLHLEHSC.L.....ghvrlhtfagls   410  
ALS_RAT_15     411  GLRRLFLRDNS.I.....ssieeqslagls   434  
ALS_RAT_16     435  ELLELDLTTNR.L.....thlprqlfqglg   458  
ALS_RAT_17     459  HLEYLLLSYNQ.L.....ttlsaevlgplq   482  
ALS_RAT_18     483  RAFWLDISHNH.L.....etlaeglfsslg   506  
ALS_RAT_19     507  RVRYLSLRNNS.L.....qtfspqp..gle   528  
PGS1_HUMAN_1    91  DTTLLDLQNND.I.....selrkddfkglq   114  
PGS1_HUMAN_2   115  HLYALVLVNNK.I.....skihekafsplr   138  
PGS1_HUMAN_3   139  KLQKLYISKNH.L.....veippn..lps.   160  
PGS1_HUMAN_4   160  SLVELRIHDNR.I.....rkvpkgvfsglr   183  
PGS1_HUMAN_5   184  NMNCIEMGGNP.L...ensgfepgafdglk   209  
PGS1_HUMAN_6   210  .LNYLRISEAK.L.....tgipkd.lpe..   230  
PGS1_HUMAN_7   230  TLNELHLDHNK.I.....qaieledllrys   253  
PGS1_HUMAN_8   254  KLYRLGLGHNQ.I.....rmiengslsflp   277  
PGS1_HUMAN_9   278  TLRELHLDNNK.L.....arvpsg.lpdlk   300  
PGS1_HUMAN_10  301  LLQVVYLHSNN.I.....tkvgvndfcpmg   324  
PGS1_BOVIN_1    92  DTTLLDLQNND.I.....selrkddfkglq   115  
PGS1_BOVIN_2   116  HLYALVLVNNK.I.....skihekafsplr   139  
PGS1_BOVIN_3   140  KLQKLYISKNH.L.....ceippn..lps.   161  
PGS1_BOVIN_4   161  SLVELRIHDNR.I.....rkvpkgvfsglr   184  
PGS1_BOVIN_5   185  NMNCIEMGGNP.L...ensgfepgafdglk   210  
PGS1_BOVIN_6   211  .LNYLRISEAK.L.....tgipkd.lpe..   231  
PGS1_BOVIN_7   231  TLNELHLDHNK.I.....qaieledllrys   254  
PGS1_BOVIN_8   255  KLYRLGLGHNQ.I.....rmiengslsflp   278  
PGS1_BOVIN_9   279  TLRELHLDNNK.L.....srvpag.lpdlk   301  
PGS1_BOVIN_10  302  LLQVVYLHTNN.I.....tkvgvndfcpvg   325  
PGS2_HUMAN_1    82  DTTLLDLQNNK.I.....teikdgdfknlk   105  
PGS2_HUMAN_2   106  NLHALILVNNK.I.....skvspgaftplv   129  
PGS2_HUMAN_3   130  KLERLYLSKNQ.L.....kelpek..mpk.   151  
PGS2_HUMAN_4   151  TLQELRAHENE.I.....tkvrkvtfngln   174  
PGS2_HUMAN_5   175  QMIVIELGTNP.L...kssgiengafqgmk   200  
PGS2_HUMAN_6   201  KLSYIRIADTN.I.....tsipqg.lpp..   222  
PGS2_HUMAN_7   222  SLTELHLDGNK.I.....srvdaaslkgln   245  
PGS2_HUMAN_8   246  NLAKLGLSFNS.I.....savdngslantp   269  
PGS2_HUMAN_9   270  HLRELHLDNNK.L.....trvpgg.laehk   292  
PGS2_HUMAN_10  293  YIQVVYLHNNN.I.....svvgssdfcppg   316  
PGS2_RABIT_1    83  DTTLLDLQNNK.I.....teikdgdfknlk   106  
PGS2_RABIT_2   107  NLHALILVNNK.I.....skispgaftplv   130  
PGS2_RABIT_3   131  KLERLYLSKNH.L.....kelpek..mpk.   152  
PGS2_RABIT_4   152  SLQELRAHENE.I.....tkvrksvfsgmn   175  
PGS2_RABIT_5   176  QMIVIELGTNP.L...kssgiengafqgmk   201  
PGS2_RABIT_6   202  KLSYIRIADTN.I.....ttipqg.lpp..   223  
PGS2_RABIT_7   223  SLTELHLDGNK.I.....tkidasslkgln   246  
PGS2_RABIT_8   247  NLAKLGLSFND.I.....savdngslanap   270  
PGS2_RABIT_9   271  HLRELHLDNNK.L.....irvpgg.ladhk   293  
PGS2_RABIT_10  294  YIQVVYLHNNN.I.....svvgandfcppg   317  
PGS2_MOUSE_1    77  DTTLLDLQNNK.I.....teikegafknlk   100  
PGS2_MOUSE_2   101  DLHTLILVNNK.I.....skispeafkplv   124  
PGS2_MOUSE_3   125  KLERLYLSKNQ.L.....kelpek..mpr.   146  
PGS2_MOUSE_4   146  TLQELRVHENE.I.....tklrksdfngln   169  
PGS2_MOUSE_5   170  NVLVIELGGNP.L...knsgiengafqglk   195  
PGS2_MOUSE_6   196  SLSYIRISDTN.I.....taipqg.lpt..   217  
PGS2_MOUSE_7   217  SLTEVHLDGNK.I.....tkvdapslkgli   240  
PGS2_MOUSE_8   241  NLSKLGLSFNS.I.....tvmengslanvp   264  
PGS2_MOUSE_9   265  HLRELHLDNNK.L.....lrvpag.laqhk   287  
PGS2_MOUSE_10  288  YIQVVYLHNNN.I.....savgqndfcrag   311  
PGS2_CHICK_1    80  DTTLLDLQNNK.I.....teikegdfknlk   103  
PGS2_CHICK_2   104  NLHALILVNNK.I.....skispaafaplk   127  
PGS2_CHICK_3   128  KLERLYLSKNN.L.....kelpen..mpk.   149  
PGS2_CHICK_4   149  SLQEIRAHENE.I.....sklrkavfngln   172  
PGS2_CHICK_5   173  QVIVLELGTNP.L...kssgiengafqgmk   198  
PGS2_CHICK_6   199  RLSYIRIADTN.I.....tsipkg.lpp..   220  
PGS2_CHICK_7   220  SLTELHLDGNK.I.....skidaeglsglt   243  
PGS2_CHICK_8   244  NLAKLGLSFNS.I.....ssvengslnnvp   267  
PGS2_CHICK_9   268  HLRELHLNNNE.L.....vrvpsg.lgehk   290  
PGS2_CHICK_10  291  YIQVVYLHNNK.I.....asigindfcplg   314  
CHAD_BOVIN_01   54  KTKLLNLQRNN.F.....pvlatnsframp    77  
CHAD_BOVIN_02   78  NLVSLHLQHCQ.I.....revaagafrglk   101  
CHAD_BOVIN_03  102  QLIYLYLSHND.I.....rvlragafddlt   125  
CHAD_BOVIN_04  126  ELTYLYLDHNK.V.....telprgllsplv   149  
CHAD_BOVIN_05  150  NLFILQLNNNK.I.....relrsgafqgak   173  
CHAD_BOVIN_06  174  DLRWLYLSENS.L.....sslqpgalddve   197  
CHAD_BOVIN_07  198  NLAKFYLDRNQ.L.....ssypsaalsklr   221  
CHAD_BOVIN_08  222  VVEELKLSHNP.L.....ksipdnafqsfg   245  
CHAD_BOVIN_09  247  YLETLWLDNTN.L.....ekfsdgaflgvt   270  
CHAD_BOVIN_10  271  TLKHVHLENNR.L.....hqlpsnfpfd..   293  
CHAO_DROME_1    80  KVFMLHMENTG.L.....reiepyflqst.   103  
CHAO_DROME_2   103  GMYRLKISGNH.L.....teipddaftgle   126  
CHAO_DROME_3   128  SLWELILPQND.L.....veipskslrhlq   151  
CHAO_DROME_4   152  KLRHLDLGYNH.I.....thiqhdsfrgle   175  
CHAO_DROME_5   177  SLQTLILRENC.I.....sqlmshsfsgll   200  
CHAO_DROME_6   201  ILETLDLSGNN.L.....feidpnvfvdgm   224  
CHAO_DROME_7   226  RLTRLLLTDNI.L.....seipydalgplk   249  
CHAO_DROME_8   250  SLRTLDISHNV.Iwslsgnetyeikastkl   278  
CHAO_DROME_9   279  NLDNLHLEYNH.I.....evlppnsfkyfd   302  
CHAO_DROME_10  303  TVNRTFFDGNP.I.....htlredafkpa.   326  
CHAO_DROME_11  326  RIREIYMRYCG.L.....tnispvafdslv   349  
CHAO_DROME_12  351  SLQILDLSGNN.L.....tklhhklfnnfd   374  
CHAO_DROME_13  375  VLRVISMRDNK.I....kiqkptetfnavh   399  
CHAO_DROME_14  402  LLKLDLSGDRN.D.....ptnlqtlrnmtr   425  
CHAO_DROME_15  428  NMRSLSISRLG.S.....ssvgpedfkdfg   451  
CHAO_DROME_16  453  ELEDLQITRAS.L.....sgiqshafkhvr   476  
CHAO_DROME_17  477  GLKRLDFSENG.I.....ssiendafheig   500  
CHAO_DROME_18  502  SLISLKMSHGY.S....gsalpaeplrhlt   526  
CHAO_DROME_19  527  SLQELDFSNNH.I.....ssmsdtsfhflk   550  
CHAO_DROME_20  551  NLRLLELHDNR.I.....eqvlkgtfqgdi   574  
CHAO_DROME_21  577  KLEEISLRFNH.L.....tsisqhtffdle   600  
CHAO_DROME_22  601  ALRKLHLDDNK.I.....dkierrafmnld   624  
CHAO_DROME_23  625  ELEYLSLRGNK.I.....nnladesfqnlp   648  
CHAO_DROME_24  649  KLEILDMAFNQ.L.....pnfnfdyfdqvg   672  
CHAO_DROME_25  673  TLSNLNVNVSH.N.qirqlmynsswsgrne   700  
CHAO_DROME_26  708  NIKILDLSHNN.I.....siihpgyfrpae   731  
CHAO_DROME_27  733  SLTHLHLGYNS.L.....mnttrdvfgnmp   756  
CHAO_DROME_28  757  HLQWLDLSYNW.I.....heldfdafkntk   780  
CHAO_DROME_29  781  QLQLVFFGHNY.L.....sdipqdifkpvq   804  
CHAO_DROME_30  805  GLRIVDFSHNH.L.....rglpdnlfyng.   828  
CHAO_DROME_31  828  GMEKLDVSHNM.M.....lkipssslssla   851  
CHAO_DROME_32  854  TLCELHLSNNF.I.....stihsmdlsnkf   877  
CHAO_DROME_33  879  SLRYLDISYNY.L.....lriddavfatmp   902  
CHAO_DROME_34  903  KLAVLDLSHNR.D.....lkvmdksfmgle   926  
CHAO_DROME_35  928  SLIKLGLENVS.L.....stvpeirlk...   949  
CHAO_DROME_36  949  YLREFRLGYNE.L.....psipqelahnms   972  
CHAO_DROME_37  973  NLRMLDLSNND.L.....tnvplmtqalp.   996  
CHAO_DROME_38  996  HLRRLMLSGNP.I.....tslnnnsfdgvn  1019  
CHAO_DROME_39 1021  DLEMLDISNFR.L.....hyfeygcldslp  1044  
CHAO_DROME_40 1045  HLRSLKLTAYS.H...lehfniphllrhhy  1070  
CHAO_DROME_41 1071  NIRQLWIEAPQ.P.....ftrivkkgsgpt  1094  
GPV_MOUSE_01    51  NLTHILLFRMD.Q.....gilrnhsfsgmt    74  
GPV_MOUSE_02    75  VLQRQMLSDSH.I.....saidpgtfndlv    98  
GPV_MOUSE_03    99  KLKTLRLTRNK.I.....srlpraildkmv   122  
GPV_MOUSE_04   123  LLEQLFLDHNA.L.....rdldqnlfqqlr   146  
GPV_MOUSE_05   147  NLQELGLNQNQ.L.....sflpanlfsslr   170  
GPV_MOUSE_06   171  ELKLLDLSRNN.L.....thlpkgllgaqv   194  
GPV_MOUSE_07   195  KLEKLLLYSNQ.L.....tsvdsgllsnlg   218  
GPV_MOUSE_08   219  ALTELRLERNH.L.....rsvapgafdrlg   242  
GPV_MOUSE_09   243  NLSSLTLSGNL.L.....eslppalflhvs   266  
GPV_MOUSE_10   267  SVSRLTLFENP.L.....eelpdvlfgema   290  
GPV_MOUSE_11   291  GLRELWLNGTH.L.....stlpaaafrnls   314  
GPV_MOUSE_12   315  GLQTLGLTRNPrL.....salprgvfqglr   339  
GPV_MOUSE_13   340  ELRVLGLHTNA.L.....aelrddalrglg   363  
GPV_MOUSE_14   364  HLRQVSLRHNR.L.....ralprtlfrnls   387  
GPV_MOUSE_15   388  SLESVQLEHNQ.L.....etlpgdvfaalp   411  
FSHR_HUMAN_1    47  NAIELRFVLTK.L.....rviqkgafsgfg    70  
FSHR_HUMAN_2    71  DLEKIEISQNDvL.....evieadvfsnlp    95  
FSHR_HUMAN_3    96  KLHEIRIEKANnL.....lyinpeafqnlp   120  
FSHR_HUMAN_4   121  NLQYLLISNTG.I.....khlpdvhkihsl   144  
FSHR_HUMAN_5   146  QKVLLDIQDNInI.....htiernsfvgls   170  
FSHR_HUMAN_6   172  ESVILWLNKNG.I.....qeihncafngt.   195  
FSHR_HUMAN_7   195  QLDELNLSDNNnL.....eelpndvfhgas   219  
FSHR_HUMAN_8   220  GPVILDISRTR.I.....hslpsyglenlk   243  
A2GL_HUMAN_1    34  DTVHLAVEFFN.L.....thlpanllqgas    57  
A2GL_HUMAN_2    58  KLQELHLSSNG.L.....eslspeflrpvp    81  
A2GL_HUMAN_3    82  QLRVLDLTRNA.L.....tglppglfqasa   105  
A2GL_HUMAN_4   106  TLDTLVLKENQ.L.....evlevswlhglk   129  
A2GL_HUMAN_5   130  ALGHLDLSGNR.L.....rklppgllanft   153  
A2GL_HUMAN_6   154  LLRTLDLGENQ.L.....etlppdllrgpl   177  
A2GL_HUMAN_7   178  QLERLHLEGNK.L.....qvlgkdlllpqp   201  
A2GL_HUMAN_8   202  DLRYLFLNGNK.L.....arvaagafqglr   225  
A2GL_HUMAN_9   226  QLDMLDLSNNS.L.....asvpeglwaslg   249  
A2GL_HUMAN_10  250  QPNWDMRDGFD.I.....sgnpwicdqnls   273  

Key

alpha helix         RED
beta strand         GREEN
core blocks         UNDERSCORE
repeat              **********
Multiple alignment of the complete sequences
You can also look at the alignment in RSF format, or MSF format
You can also get the unaligned sequences in FASTA format
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