sushi_1_ref6 - reference 1

Back to Schema

Back to Index
Multiple alignment of complete sequences
Name                SUSHI
Number of sequences 4


Key

alpha helix         RED
beta strand         GREEN
core blocks         UNDERSCORE
repeat              **********


                   *******************************************************************************
LFC_TACT_1    141  GCPLl.PSDSQVqev.........RNPPDNPQTIDYSCSP...GFKLKG...vARISCLPnGQWSSf.....PPKCIR.   198  
LFC_TACT_2    198  ECAKv.SSPEHGkvnap.......SGNMIEGATLRFSCDS...PYYLIG...qETLTCQGnGQWSGq.....IPQCKKl   257  
LFC_TACT_3    259  FCPDl.DPVNHAehqvkigveqk.YGQFPQGTEVTYTCSG...NYFLMG...fNTLKCNPdGSWSGs.....QPSCVKv   324  
LFC_TACT_4    575  KCDDp.GPLENGhatlhgqs....IDGFYAGSSIRYSCEV...LHYLSG...tETVTCTTnGTWSAp.....KPRCIKv   637  
LFC_TACT_5    684  KPPPk.PRSSQPstvdlaskvklpEGHYRVGSRAIYTCES..rYYELLG...sQGRRCDSnGNWSGr.....PASCIPv   751  
CASP_MESAU_1  299  PCPKe.ITANSVwape........KAKYVFKDVVKISCVDgfeAVEGNVgstfFYSTCQSnGQWSNs.....RLRCQPv   363  
CASP_MESAU_2  364  DCGIp.EPIQNGkvdd........PENTLFGSVIHYSCEEpyyYMEHAE..hgGEYRCAAnGSWVNdelgieLPKCVPv   431  
O01654        317  KCLHalHDPRNGslsfshs.....RSYHEFEDVATFSCDR...GFDIIG...vPRLKCLSdGSWSHs.....APICQIk   379  
CO2_MOUSE_1    93  RCLAp.SSFENGiyfpr.......LVSYPVGSNVSFECDE...DFTLRG...sPVRYCRPnGLWDGe.....TAVCDNg   152  
CO2_MOUSE_2   155  HCPN..PGISVGtart........GLNFDLGDKVRYRCSS...SNMVLT..gsAERECQSnGVWSGs.....EPICRQp   213  

Key

alpha helix         RED
beta strand         GREEN
core blocks         UNDERSCORE
repeat              **********
Multiple alignment of the complete sequences
You can also look at the alignment in RSF format, or MSF format
You can also get the unaligned sequences in FASTA format
Back to Schema

Back to Index