sh3_1_ref6 - reference 6

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Multiple alignment of repeats only
Name                SH3
Number of sequences 6


Key

alpha helix         RED
beta strand         GREEN
core blocks         UNDERSCORE
repeat              **********


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O61618_1  677  ..................................................................mnsavdawavtprerlkyqeqfralqpqagfvtgaqakgfflqsqlpplilgqiwaladtdsdgkmninefsiacklinlklrgmdvpkvlppsllssltgdvpsmtprgstsslspldplkgivpavapvvpvvappvavatvisppgvsvpsgptpptsnppsrhtsiserapsiesvnqgewavqaaqkrkytqvfnandrtrsgyltgsqargvlvqsklpqvtlaqiwtlsdidgdgrlncdefilamflcekamagekipvtlpqewvppnlrkiksrpgsvsgvvsrpgsqpasrhasvssqsgvgvvdadptaglpgqtsfedkrkenyvkgqaeldrrrkimedqqrkereererkereeadkrekarleaerkqqeelerqlqrqreiemekeeqrkreleakeaarkelekqrqqeweqariaemnaqkereqervlkqkahntqlnvelstlnekikelsqricdtragvtnvktvidgmrtqrdtsmsemsqlkarikeqnakllqltqerakweakskasgaalggenaqqeqlnaafahkqliinqikdkveniskeieskkedintndvqmselkaelsalitkcedlykeydvqrtsvlelkynrknetsvssawdtgsssaweetgttvtdpyavasndisalaapavdlggpapegfvkYQAVYEFNARNaEEITFVPGDIILVPLEQna.....epGWLAGein.....gHTGWFPESYVeklevgevapvaaveapvdaqvadtyndnintssipaasadltaagdv.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
O61618_2  779  ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................eyYIAAYPYESAEeGDLSFSAGEMVMVIKKE........gEWWTGtig.....sRTGMFPSNYVqkadvgtastaaaepvesldqettlngnaaytaapveaqeqvyqplpvqepseqpisspgvgaeeahedldtevsqintqsktqssepaesysrpmsrtssmtpgmrakrs..............................................................................................................................................................................................................................................................................................................................................................................................................................................
O61618_3  941  ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................eiAQVIAPYEATStEQLSLTRGQLIMIRKKT.......dsGWWEGelqakgrrrQIGWFPATYVkvlqggrnsgrntpvsgsriemteqil..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
O61618_4 1025  ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................dkVIALYPYKAQNdDELSFDKDDIISVLGRD.......epEWWRGeln.....gLSGLFPSNYVgpfvtsgkpakangttkk...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
O42287_1  735  ........maqfgtpfggnldiwaitveerakhdqqfhglkptagyitgdqarnfflqsglpqpvlaqiwaladmnndgrmdqlefsiamkliklklqgyplpsilpsnmlkqpvampaaavagfgmsgivgipplaavapvpmpsipvvgmspplvssvptvpplsngapaviqshpafahsatlpksssfgrsvagsqintklqkaqsfdvpapplvvewavpsssrlkyrqlfnsqdktmsgnltgpqartilmqsslpqsqlatiwnlsdidqdgkltaeefilamhlidvamsgqplppilppeyippsfrrvrsgsglsimssvsvdqrlpeepeeeepqnadkklpvtfedkkrenfergnlelekrrqalleqqrkeqerlaqleraeqerkererqdqerkrqqdlekqlekqrelerqreeerrkeierreaakrelerqrqlewernrrqellnqrnreqedivvlkakkktlefelealndkkhqlegklqdircrlttqrheiestnksrelriaeithlqqqlqesqqllgkmipekqslidqlkqvqqnslhrdslltlkraletkeigrqqlrdqldeveketraklqeidvfnnqlkelrelynkqqfqkqqdfetekikqkelerktseldklkeedkrrmleqdklwqdrvkqeeerykfqdeekekreesvqkcevekkpeiqekpnkpfhqppepgklggqipwmntekapltinqgdvkvvyYRALYPFDARShDEITIEPGDIIMVDESQtg.....epGWLGGelk.....gKTGWFPANYAermpesefpsttkpaaettakptvhvapspvapaaftntstnsnnwadfsstwptnntdkvesdnwdtwaaqpsltvpsagqhrqrsaftpatvtgsspspvlgqgekveg..............................................................................................................................................................................................................................................................................................................................................................................................................................................
O42287_2  900  ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................lqAQALYPWRAKKdNHLNFNKNDVITVLEQQ........dMWWFGevq.....gQKGWFPKSYVklisgplrkstsidstssespaslkrvsspafkpaiqg.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
O42287_3  989  ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................eeYISMYTYESNEqGDLTFQQGDLIVVIKKD........gDWWTGtvg.....eKTGVFPSNYVrpkdseaagsggktgslgkkp........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
O42287_4 1061  ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................eiAQVIASYAATApEQLTLAPGQLILIRKKN.......pgGWWEGelqargkkrQIGWFPANYVkllspgtnkstpteppkptslppt.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
O42287_5 1142  ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................cqVIGMYDYIAQNdDELAFSKGQVINVLNKE.......dpDWWKGeln.....gHVGLFPSNYVklttdmdpsqqfrlgvkpaggipatgdrpfilfpfrdgpsllpnafqapplsvvmikfrcftaprfcpdmnvkyini................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
Q9Z0R4_1  741  ..maqfptpfggsldvwaitveerakhdqqflslkpiagfitgdqarnfffqsglpqpvlaqiwaladmnndgrmdqvefsiamkliklklqgyqlpstlppvmkqqpvaissapafgiggiasmppltavapvpmgsipvvgmspplvssvppaavpplangappviqplpafahpaatwpksssfsrsgpgsqlntklqkaqsfdvasappaaewavpqssrlkyrqlfnshdktmsghltgpqartilmqsslpqaqlasiwnlsdidqdgkltaeefilamhlidvamsgqplppvlppeyippsfrrvrsgsgmsvissssvdqrlpeepssedeqqpekklpvtfedkkrenfergsvelekrrqalleqqrkeqerlaqleraeqerkererqeqeakrqlelekqlekqrelerqreeerrkeierreaakrelerqrqlewernrrqellnqrnkeqegtvvlkarrktlefelealndkkhqlegklqdircrlatqrqeiestnksrelriaeithlqqqlqesqqmlgrlipekqilsdqlkqvqqnslhrdslltlkraleakelarqqlreqldeveretrsklqeidvfnnqlkelreihskqqlqkqrsleaarlkqkeqerkslelekqkedaqrrvqerdkqwlehvqqeeqprprkpheedrlkredsvrkkeaeerakpemqdkqsrlfhphqepaklatqapwsttekgpltisaqesvkvvyYRALYPFESRShDEITIQPGDIVMVDESQtg.....epGWLGGelk.....gKTGWFPANYAekipenevptpakpvtdltsapapklalretpaplpvtssepsttpnnwadfsstwpsssnekpetdnwdtwaaqpsltvpsagqlrqrsaftpatatgsspspvlgqgekveg...........................................................................................................................................................................................................................................................................................................................................................................................................................................
Q9Z0R4_2  909  ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................lqAQALYPWRAKKdNHLNFNKSDVITVLEQQ........dMWWFGevq.....gQKGWFPKSYVklisgpvrkstsidtgptespaslkrvaspaakpaipg.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
Q9Z0R4_3  998  ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................eeFIAMYTYESSEqGDLTFQQGDVIVVTKKD........gDWWTGtvg.....dKSGVFPSNYVrlkdsegsgtagktgslgkkp........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
Q9Z0R4_4 1070  ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................eiAQVIASYAATGpEQLTLAPGQLILIRKKN.......pgGWWEGelqargkkrQIGWFPANYVkllspgtskitptelpktavqpav.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
Q9Z0R4_5 1151  ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................cqVIGMYDYTAQNdDELAFSKGQIINVLNKE.......dpDWWKGevs.....gQVGLFPSNYVklttdmdpsqqwcsdlhlldmltpterkrqgyihelivteenyv.ndlqlvteifqkplteselltekevamifvnwkelimcnikllkalrvrkkmsgekmpvkmigdilsaqlphmqpyirfcscqlngaaliqqktdeapdfkefvkrlamdprckgmplssfilkpmqrvtrypliiknilentpenhpdhshlkhalekaeelcsqvnegvrekensdrlewiqahvqceglseqlvfnsvtnclgprkflhsgklykaksnkelygflfndfllltqitkplgssgtdkvfspksnlqykmyktpiflnevlvklptdpsgdepifhishidrvytlraesinertawvqkikaaselyietekkkrekaylvrsqratgigrlmvnvvegielkpcrshgksnpycevtmgsqchitktiqdtlnpkwnsncqffirdleqevlcitvferdqfspddflgrteirvadikkdqgskgpvtkclllhevptgeivvrldlqlfdep............................
Q9Z0R6_1  720  .......................maqfptamnggpnmwaitseertkhdkqfdnlkpsggyitgdqartfflqsglpapvlaeiwalsdlnkdgkmdqqefsiamkliklklqgqqlpvvlppimkqppmfsplisarfgmgsmpnlsihqplppvapiatplssatsgtsipplmmpaplvpsvstsslpngtasliqplsipyssstlphassyslmmggfggasiqkaqslidlgsssstsstaslsgnspktgtsewavpqpsrlkyrqkfnsldkgmsgylsgfqarnallqsnlsqtqlatiwtladidgdgqlkaeefilamhltdmakagqplpltlppelvppsfrggkqvdsvngtlpsyqktqeeepqkklpvtfedkrkanyergnmelekrrqvlmeqqqreaerkaqkekeewerkqrelqeqewkkqlelekrlekqrelerqreeerrkeierreaakqelerqrrlewerlrrqellsqktreqedivrlssrkkslhleleavngkhqqisgrlqdvqirkqtqktelevldkqcdleimeikqlqqelkeyqnkliylvpekqllneriknmqlsntpdsgisllhkkssekeelcqrlkeqldaleketasklsemdsfnnqlkelresyntqqlaleqlhkikrdklkeierkrleqiqkkkledeaarkakqgkenlwresirkeeeekqkrlqeeksqdktqeeerkaeakqsetasalvnYRALYPFEARNhDEMSFSSGDIIQVDEKTvg.....epGWLYGsfq.....gKFGWFPCNYVekvlssekalspkkallpptvslsatstssqppasvtdyhnvsfsnltvnttwqqksaftrtvspgsvspihgqgqaven.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................
Q9Z0R6_2  854  ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................lkAQALCSWTAKKeNHLNFSKHDVITVLEQQ........eNWWFGevh.....gGRGWFPKSYVklipgnevqrgepealyaavtkkptstaypvtstaypvg......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
Q9Z0R6_3  944  ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................edYIALYSYSSVEpGDLTFTEGEEILVTQKD........gEWWTGsig.....eRTGIFPSNYVrpkdqenfgnasksgasnkkp........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
Q9Z0R6_4 1016  ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................eiAQVTSAYAASGtEQLSLAPGQLILILKKN.......tsGWWQGelqargkkrQKGWFPASHVkllgpssertmptfhav............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
Q9Z0R6_5 1090  ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................cqVIAMYDYMANNeDELNFSKGQLINVMNKD.......dpDWWQGetn.....gLTGLFPSNYVkmttdsdpsqqwcadlqaldtmqpterkrqgyiheliqteerymdddlqlvievfqkrmaeegflteadmalifvnwkelimsntkllralrvrkktggekmpvqmigdilaaelshmqayirfcscqlngatllqqktdedtdfkeflkklasdprckgmplssfllkpmqritrypllirsilentpqshvdhsslklaleraeelcsqvnegvrekensdrlewiqahvqceglaeqlifnsltnclgprkllhsgklyktksnkelhaflfndfllltylvrqfaaasgheklfnskssaqfrmyktpiflnevlvklptdpsgdepvfhishidrvytlrtdninertawvqkikgaseqyidtekkkrekayqarsqktsgigrlmvhvieatelkackpngksnpycevsmgsqsyttrtlqdtlnpkwnfncqffikdlyqdvlcltmfdrdqfspddflgrtevpvakirteqeskgpttrrlllhevptgevwvrfdlqlfeqktll........................
o95216_1  743  maqfptpfggsldiwaitveerakhdqqfhslkpisgfitgdqarnfffqsglpqpvlaqiwaladmnndgrmdqvefsiamkliklklqgyqlpsalppvmkqqpvaissappfgmggiasmppltavapvpmgsipvvgmsptlvssvptaavpplangappviqplpafahpaatlpksssfsrsgpgsqlntklqkaqsfdvasvppvaewavpqssrlkyrqlfnshdktmsghltgpqartilmqsslpqaqlasiwnlsdidqdgkltaeefilamhlidvamsgqplppvlppeyippsfrrvrsgsgisvisstsvdqrlpeepvledeqqqlekklpvtfedkkrenfergnlelekrrqalleqqrkeqerlaqleraeqerkererqeqerkrqlelekqlekqrelerqreeerrkeierreaakrelerqrqlewernrrqellnqrnkeqedivvlkakkktlefelealndkkhqlegklqdircrlttqrqeiestnksrelriaeithlqqqlqesqqmlgrlipekqilndqlkqvqqnslhrdslvtlkraleakelarqhlrdqldeveketrsklqeidifnnqlkelreihnkqqlqkqksmeaerlkqkeqerkiielekqkeeaqrraqerdkqwlehvqqedehqrprklheeeklkreesvkkkdgeekgkqeaqdklgrlfhqhqepakpavqapwstaekgpltisaqenvkvvyYRALYPFESRShDEITIQPGDIVMVKGEWvdesqtgepGWLGGelk.....gKTGWFPANYAekipenevpapvkpvtdstsapapklalretpaplavtssepsttpnnwadfsstwptstnekpetdnwdawaaqpsltvpsagqlrqrsaftpatatgsspspvlgqgekveg...........................................................................................................................................................................................................................................................................................................................................................................................................................................
o95216_2  916  ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................lqAQALYPWRAKKdNHLNFNKNDVITVLEQQ........dMWWFGevq.....gQKGWFPKSYVklisgpirkstsmdsgssespaslkrvaspaakpvvsg.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
o95216_3 1005  ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................eeFIAMYTYESSEqGDLTFQQGDVILVTKKD........gDWWTGtvg.....dKAGVFPSNYVrlkdsegsgtagktgslgkkp........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
o95216_4 1077  ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................eiAQVIASYTATGpEQLTLAPGQLILIRKKN.......pgGWWEGelqargkkrQIGWFPANYVkllnpgtskitpteppkstalaav.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
o95216_5 1158  ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................cqVIGMYDYTAQNdDELAFNKGQIINVLNKE.......dpDWWKGevn.....gQVGLFPSNYVklttdmdpsqqwcsdlhlldmltpterkrqgyihelivteenyvndlqlvteifqkplmeselltekevamifvnwkelimcnikllkalrvrkkmsgekmpvkmigdilsaqlphmqpyirfcsrqlngaaliqqktdeapdfkefvkrlemdprckgmplssfilkpmqrvtrypliiknilentpenhpdhshlkhalekaeelcsqvnegvrekensdrlewiqahvqceglseqlvfnsvtnclgprkflhsgklykaknnkelygflfndfllltqitkplgssgtdkvfspksnlqykmyktpiflnevlvklptdpsgdepifhishidrvytlraesinertawvqkikaaselyietekkkrekaylvrsqratgigrlmvnvvegielkpcrshgksnpycevtmgsqchitktiqdtlnpkwnsncqffirdleqevlcitvferdqfspddflgrteirvadikkdqgskgpvtkclllhevptgeivvrldlqlfdep.............................
Q9U2T9_1  676  ...................................................................mtnpwevsdaeyqknfamfgqltggqpfmdavtarnalmrsnlptqvlsqiwalsdldkdgrldireysiamrlalnclagipippqlppsllvvparnapptwpgsrhgsvdysqtlppaidrrmsqsyipsapvsiagtpssrhnsisagsplnndrnvfegrqlenwaiphhnklkysqlfnaldkerlgslssqvgrsalglsglptnvlahiwflsdvnkdgklsvdeyaisqymiemfksgfalpkitplelvrmcgissrsanntpelepgaeppqkspapktfedkrqdnlskgqaelerrrrvleeeeqrrraevekkereeeakknrerqekerqaeverqaelerqriieaqreeeekkrrlemerrreedekmrkvqmekakvkqmqvqmpeqkkwnfynqkqqenerlaqrqqrektlqfqlqaldekvidvevdigkakeavaevtgfiermrstrdekvarikelqetnqktaiesqelghqllqkqsahkettqrkselealrrkrdairkaiedaalelstekeksynqteilktnkekyktdvysklvakreeyrnsfellvhaqtharskigefeaksapasaapapapapaptttngfpanfndafgefdktdasqrfdadfgatstadpfaqiaqapahskgavdqsafnihdtykCRALFAFEARSeDELSFEPGDVIIVFQSH.....aaepGWRAGqlr.....eKVGWFPEAFVeaiaavptpggdppiqnmppnmtpsssvdqigvkaarkaeiaaamglteggappassapaaaavi............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
Q9U2T9_2  795  ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................sqCIAQFQWRARNeEDLSFAKGDTIEVLEKQ........eMKWKGrnpa....gEIGWFPKSYVkevgattstttpivspskasagapgaaagaqydvvpsdvtlqasetapqq...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
Q9U2T9_3  897  ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................qlYTVIYDFEAVEtTDLALHVGDTILVLEKN........dEWWKGrcn.....gREGIFPANYVeisvqqagdptpptqaptpaapptvl...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
Q9U2T9_4  974  ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ceAKVVVDFVASApNQLGIKVGEIVKIREKS.......aaGWWEGelirng.kpIAGWFPGEYVkvleeaaspa...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
Q9U2T9_5 1040  ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................trATAVYDYEASQpDELGFKTGDVIIVTDKS.......eaEWWSGhreqdp..sKSGLFPSNYVqqq..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................

Key

alpha helix         RED
beta strand         GREEN
core blocks         UNDERSCORE
repeat              **********
Multiple alignment of repeats only
You can also look at the alignment in RSF format, or MSF format
You can also get the unaligned sequences in FASTA format
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