zf_1_ref6 - reference 1

Back to Schema

Back to Index
Multiple alignment of complete sequences
Name                ZincFinger
Number of sequences 7


Key

alpha helix         RED
beta strand         GREEN
core blocks         UNDERSCORE
repeat              **********


                    *****************************
Q61329_1        77  kEVSC..NECSASFSSLQTYMEHHcpgtH   103  
Q61329_2       280  pILMC..FLCKLSFGYVRSFVTHAvhd.H   305  
Q61329_3       639  sGVEC..PKCDTVLGSSRSLGGHMtmm.H   664  
Q61329_4       670  kTLKC..PKCNWHYKYQQTLEAHMkek.H   695  
Q61329_5       725  kPFRC..EVCNYSTTTKGNLSIHMqsdkH   751  
Q61329_6       803  pTWRC..EVCDYETNVARNLRIHMtsekH   829  
Q61329_7       983  dSYQC..KLCRYNTQLKANFQLHCktdkH  1009  
Q61329_8      1039  vHLKC..NACDYYTNSLEKLRLHTvnsrH  1065  
Q61329_9      1087  cYYHC..VLCNYSTKAKLNLIQHVrsmkH  1113  
Q61329_10     1231  qMYQC..PYCKYSNADVNRLRVHAmtq.H  1256  
Q61329_11     1260  pLLRC..PLCQDMLNNKIHLQLHLthl.H  1285  
Q61329_12     1368  sGFLCwkKGCNQVFKTSATLQTHFnev.H  1395  
Q61329_13     1409  yKYRC..NQCSLAFKTIEKLQLHSqy..H  1433  
Q61329_14     1437  aATMC..CLCQRSFRTFQALKKHLets.H  1462  
Q61329_15     1553  rPYKC..TVCKESFTQKNILLVHYnsvsH  1579  
Q61329_16     1604  kPFKC..NTCNVAYSQSSTLEIHMrsvlH  1630  
Q61329_17     1988  eKLEC..DSCGKLFSNILILKSHQehv.H  2013  
Q61329_18     2333  lNYQC..KKCSLVFQRIFDLIKHQkkl.C  2358  
Q61329_19     2537  iPYQC..DQCKLAFPSFEHWQEHQql..H  2561  
Q61329_20     2718  aHRRC..PFCRALFKAKTALEAHIrsr.H  2743  
Q61329_21     3030  pKTEC..TLCGIKYSARLSVRDHIfsqqH  3056  
Q61329_22     3490  yKLVC..RKCQAGFGDEEAARSHLksl.C  3515  
Q61329_23     3550  gSYHC..LACESALCGEEALSQHLesalH  3576  
ZFH1_DROME_1    72  fLVKC..TQCHKRFPEYQSLSEHIase.H    97  
ZFH1_DROME_2   293  gAYPC..MQCTASFASREQLEQHEql..H   317  
ZFH1_DROME_3   328  vSQTC..RICHKAFANVYRLQRHMis..H   352  
ZFH1_DROME_4   359  rKFKC..KECDKAFKFKHHLKEHVri..H   383  
ZFH1_DROME_5   387  kPFGC..DNCGKRFSHSGSFSSHMtskkC   413  
ZFH1_DROME_6   632  aDLRC..SRCSKQFNHPTELVQHEkvl.C   657  
ZFH1_DROME_7   971  lPYVC..DQCDKAFAKQSSLARHKye..H   995  
ZFH1_DROME_8   999  rPYQC..IECPKAFKHKHHLTEHKrl..H  1023  
ZFH1_DROME_9  1027  kPFQC..SKCLKRFSHSGSYSQHMn...H  1050  
ZFH2_DROME_1   131  pILMC..FICKLSFGNVKSFSLHAnte.H   156  
ZFH2_DROME_2   557  kTLKC..PQCNWHYKYQETLEIHMrek.H   582  
ZFH2_DROME_3   612  kPYRC..EICNYSTTTKGNLSIHMqsdkH   638  
ZFH2_DROME_4   740  pSFRC..DICSYDTSVARNLRIHMtsekH   766  
ZFH2_DROME_5   948  nNYIC..RLCNYKTNLKANFQLHSktdkH   974  
ZFH2_DROME_6  1007  vQLKC..NCCDFHTNSIQKLSLHTqqmrH  1033  
ZFH2_DROME_7  1082  kLLLC..QLCNFTAQNIHEMVQHVkgirH  1108  
ZFH2_DROME_8  1218  tVFKC..NLCEYFVQSKSEIAAHIete.H  1243  
ZFH2_DROME_9  1349  vGVQC..PLCLENHFREKQYLEDHltsvH  1375  
ZFH2_DROME_10 1446  qGLSC..QQCEASFKHEEQLLKHAqqnqH  1472  
ZFH2_DROME_11 1521  yKYRC..KQCSLAFKTQEKLTTHMly..H  1545  
ZFH2_DROME_12 1549  dATKC..SFCQRNFRSTQALQKHMeqa.H  1574  
ZFH2_DROME_13 2242  iNYAC..KKCNLVFQRYYELIRHQkn..H  2266  
ZFH2_DROME_14 2379  pKFDC..DKCELNFNQLEKLREHQll..H  2403  
Q94196_1        22  rKFKC..PECTKAFKFKHHLKEHIri..H    46  
Q94196_2        50  kPFEC..QQCHKRFSHSGSYSSHMss..K    74  
Q94196_3       563  gLFSC..DQCDKVFGKQSSLARHKye..H   587  
Q94196_4       591  rPYKC..DICEKAFKHKHHLTEHKrl..H   615  
Q94196_5       619  kPFQC..DKCLKRFSHSGSYSQHMn...H   642  
P70121_1        68  gGYEC..KYCTFQTPDLNMFTFHVdse.H    93  
P70121_2       100  sSYVC..VECNFLTKRYDALSEHNlky.H   125  
Q60542_1        92  qLLTC..PYCDRGYKRFTSLKEHIkyr.H   117  
Q60542_2       122  dNFSC..SLCSYTFAYRTQLERHMts..H   146  
Q60542_3       162  rKFKC..TECGKAFKYKHHLKEHLri..H   186  
Q60542_4       190  kPYEC..PNCKKRFSHSGSYSSHIsskkC   216  
Q60542_5       825  gMYAC..DLCDKIFQKSSSLLRHKye..H   849  
Q60542_6       853  rPHEC..GICKKAFKHKHHLIEHMrl..H   877  
Q60542_7       881  kPYQC..DKCGKRFSHSGSYSQHMn...H   904  
Q9UK11_1       174  kSHSC..DECGKSFCYISALHIHQrv..H   198  
Q9UK11_2       202  kLFKC..DVCGKEFSQSLHLQTHQrv..H   226  
Q9UK11_3       230  kPFKC..EQCGRGFRCRSALTVHCkl..H   254  
Q9UK11_4       258  kHYNC..eacgrafihdfqlqkhqri..H   282  
Q9UK11_5       286  kPFKC..EICGKSFCLRSSLNRHCmv..H   310  
Q9UK11_6       342  kPYNC..KECGKSFKWSSYLLVHQrv..H   366  
Q9UK11_7       370  kPYKC..EECGKGYISKSGLDLHHra..H   394  
Q9UK11_8       398  rPYNC..DDCGKSFRQASSILNHKrl..H   422  
Q9UK11_9       426  kPFKC..EDCGKKLVYRSYRKDQQkn..H   450  

Key

alpha helix         RED
beta strand         GREEN
core blocks         UNDERSCORE
repeat              **********
Multiple alignment of the complete sequences
You can also look at the alignment in RSF format, or MSF format
You can also get the unaligned sequences in FASTA format
Back to Schema

Back to Index