msl_ref7 - reference

Name       description
Number of sequences              14

Name         Group                                                                                                                                                                                            
MSCL_ECOLI    1    .........msiikefrefamrgNVVDLAVGVIIGAAFGKIVSSLVADIIMPPLGLLIggidfkqfavtlrdaq.......gdipavvmhYGVFIQNVFDFLIVAFAIFMAIKLINkln...rkkee..paaap.apt....keevllteirdllkeqnnrs.......................
MSCL_ERWCA    1    .........msiikefrefamrgNVVDLAVGVIIGALFGKIVSSLVSDIIMPPLGLLIggvdfkqfalflrnaq.......ggipavvmnYGAFIQNIFDFIIVAFAIFIAIKLMNkm....rckqedtpaapp.kps....aeekllaeirdllkeqqtrq.......................
MSCL_HAEIN    1    .........mnfikefrefamrgNVVDMAVGVIIGSAFGKIVSSLVSDIFTPVLGILTggidfkdmkfvlaqaq.......gdvpavtlnYGLFIQNVIDFIIIAFAIFMMIKVINkv....rkpeekkt......ap....kaetllteirdllknk...........................
MSCL_PSEFL    1    .........mgllsefkafavkgNVVDMAVGIIIGAAFGKIVSSFVGDVIMPPIGLLIggvdfsdlaitlkae........gdvpavvlaYRKFIQTVLNFVIVAFAIFMGVKAINrl....kreeavapsepp.vps....aeetllteirdllkaqqnks.......................
Q9RH75        1    .msgvdekgrrmlkefrefamkgNVVDLAVGVIIRRAFGAIVTSLVGDVIMPLIGAVTggldfsnyftplskavtatnladakkqgavlaWGSFLTLTINFIIIAFVLFLVIRAINtl....krkeeaapaapp.kps....aevellteirdllkksctrtlrpnc..................
MSCL_BACSU    1    ...........mwnefkafamrgNIVDLAIGVVIGGAFGKIVTSLVNDIIMPLVGLLLggldfsglsftfg..............davvkYGSFIQTIVNFLIISFSIFIVIRTLNgl...rrkkeaeeeaaeeavd.....aqeellkeirdllkqqakspe......................
MSCL_CLOPE    1    ...........mwkefkefamkgNVIDLAIGVVIGGAFGKIVTSLVNDIIMPVVGSLVgkvdfsnlyinlsgqqfnslqeaqaagaatinYGLFLNNLINFLIIAFSIFIVIKQINklknftkkkeevkveatekdc.....pycytkidikatrcphctsvleeatn.................
MSCL_CLOHI    1    ...........mwkdfkefamkgNVVDLAVGVIIGGAFGKIVTSLVNDVIMPILGLILgginftsakltlhgln........sekpltlnYGQFIQNILDFLIISFSIFLFIRLINrf....krkeeaveeakipeis....reeellgeirdllkeknk.........................
MSCL_SYNY3    1    mvksarqgaggfwrdfkdfilrgNVVDLAVAVVIGGAFTSIVNAFVAWLMAVLLQPVL...dqagvsqlqdl...............plgLGELVIAIINFLIIAFVIFLIIKAIEkmq...rkkaveeeivaeaqpdpvleaqtnltdsinrlittlenqqsssq...................
MSCL_STAAU    1    ...........mlkefkefalkgNVLDLAIAVVMGAAFNKIISSLVENIIMPLIGKIFgsvdfakewsfwg.................ikYGLFIQSVIDFIIIAFALFIFVKIANtlm...kkeeaeeeav...ve.....envvllteirdllrekk..........................
MSCL_MYCTU    2    ...........mlkgfkeflargNIVDLAVAVVIGTAFTALVTKFTDSIITPLINRIGvnaqsdvgilrigi...........gggqtidLNVLLSAAINFFLIAFAVYFLVVLPYntl...rkkgeveqpgd.........tqvvllteirdllaqtngdspgrhggrgtpsptdgprastesq
1msl          2    ....................argNIVDLAVAVVIGTAFTALVTKFTDSIITPLINRIGvnaqsdvgilrigi...........gggqtidLNVLLSAAINFFLIAFAVYFLVVLPYntl...rkkgeveqpgd.........tqvvllteir.................................
MSCL_MYCLE    2    ...........mfrgfkeflsrgNIVDLAVAVVIGTAFTALITKFTDSIITPLINRVGvnqqtnisplridi...........ggdqaidLNIVLSAAINFLLIALVVYFLVVLPYtti...rkhgeveqfdtdlig.....nqvvllaeirdllaqsngapsgrhvdtadltptpnhepradt.
Q9RRR4        2    ...........mlngfrdfilrgNVVDLAVGVVIGAAFNNVVAAFTKAFLDPLIRLATgghgkvagtfavn..............gitfdWGTFVSTLINFLLTAAVLYFFVVMPMna...aterlkrsekaaeaeps....neekllaeirdavrsrpl.........................

Key

predicted transmembrane helix    BLUE
helix                            RED
core blocks                      UNDERSCORE
fuzzy blocks                     underscore