photo_ref7 - reference


Name       description
Number of sequences              33

Name         Group                                                                                                                                                                                                                                                                                                                                                                                                      
BACH_HALHP    1    ....................mtaasttattmlqatqsdvlqeiqsnfllnssiwvnialagvvillfvamgrd...iesPRAKLIWVATMLVPLVSISSYAGLASGLTVGflqmppghalag..........qevLSPWGRYLTWTFSTPMILLALGLLA.......dtDIASLFTAITMDIGMCVTGLAAALITs.....shllRWVFYGISCAFFVAVLYVLLvqwpada...eaagtSEIFGTLKILTVVLW.lgYPILWALGSEG.vall.svgvTSWGYSGLDILAKYVFAFLLLRwvaanegavsgsgmsigs...ggaapadd.........................................................
BACH_HALHS    1    ....................mtavsttattvlqatqsdvlqeiqsnfllnssiwvnialagvvillfvamgrd...lesPRAKLIWVATMLVPLVSISSYAGLASGLTVGflqmppghalag..........qevLSPWGRYLTWTFSTPMILLALGLLA.......dtDIASLFTAITMDIGMCVTGLAAALITs.....shllRWVFYGISCAFFVAVLYVLLvqwpada...eaagtSEIFGTLKILTVVLW.lgYPILWALGSEG.vall.svgvTSWGYSGLDILAKYVFAFLLLRwvaanegtvsgsgmgigs...ggaapadd.........................................................
BACH_HALVA    1    ....................mpaastaattllqasqsevlgeiqsnfllnsslwvnialagvvillfvamgre...lesSRAKLIWVATMLVPLVSISSYAGLASGLTVGflqmppghalag..........qevLSPWGRYLTWTFSTPMILLALGLLA.......dtDMASLFTAITMDIGMCITGLAAALVTs.....shllRWVFYGISCAFFIAVLYVLLvewpada...eaagtSEIFGTLKLLTVVLW.lgYPILWALGSEG.vall.svgvTSWGYSGLDILAKYVFAFLLLRwvaanedtvtqagmslgs...ggaapadd.........................................................
BACH_HALSS    1    ...............mietaaadilaggmvplemtqtqifeavqsdtllasslwinialaglsillfvymgrn...vedPRAQLIFVATLMVPLVSISSYTGLVSGLTVSflempaghalag..........qevLTPWGRYLTWALSTPMILIAVGLLA.......gsNTTKLFTAVVADIGMCVTGLAAALTTs.....syllRWVWYAISCAFFVVVLYILLaewaeda...eiagtADIFNTLKVLTVVLW.lgYPIFWALGAEG.lavl.dvaiTSWAYSGMDIVAKYLFAFLLLRwvvnnertvadvasglgsgsrggaapadd.........................................................
O93742        1    ...............mmeta.adalasgtvplemtqtqifeaiqgdtllasslwinialaglsillfvymgrn...ledPRAQLIFVATLMVPLVSISSYTGLVSGLTVSflempaghalag..........qevLTPWGRYLTWALSTPMILVALGLLA.......gsNATKLFTAVTADIGMCVTGLAAALTTs.....syllRWVWYVISCAFFVVVLYVLLaewaeda...evagtAEIFNTLKLLTVVLW.lgYPIFWALGAEG.lavl.dvavTSWAYSGMDIVAKYLFAFLLLRwvvdnertvagmaaglgapl.arcapadd.........................................................
BACH_HALHM    1    ........................................................ialaglsillfvymgrn...vedPRAQLIFVATLMVPLVSISSYTGLVSGLTVGflempaghalagmgagpe....ggvFTPWGRYLTWAFSTPMILIALGLLA.......gsNMSKLFTAVVADVGMCITGLAAALTTs.....syllRWVWYGISCAFFVVVLYILLaewakda...evagtADIFNTLKVLTVVLW.lgYPIFWALGAEG.lavl.diaiTSWAYSGM....................................................................................................
BACH_NATPH    1    ...............mtetlppvtesavalqaevtqrelfefvlndpllasslyinialaglsillfvfmtrg...lddPRAKLIAVSTILVPVVSIASYTGLASGLTISvlempaghfaegssvmlggeevdgvVTMWGRYLTWALSTPMILLALGLLA.......gsNATKLFTAITFDIAMCVTGLAAALTTs.....shlmRWFWYAISCACFLVVLYILLvewaqda...kaagtADMFNTLKLLTVVMW.lgYPIVWALGVEG.iavl.pvgvTSWGYSFLDIVAKYIFAFLLLNyltsnesvvsg..sildvps.asgtpadd.........................................................
BACH_HALSP    1    ....................msitsvpgvvdagvlgaqsaaavrenallssslwvnvalagiailvfvymgrt...irpGRPRLIWGATLMIPLVSISSYLGLLSGLTVGmiempaghalag..........emvRSQWGRYLTWALSTPMILLALGLLA.......dvDLGSLFTVIAADIGMCVTGLAAAMTTs.....allfRWAFYAISCAFFVVVLSALVtdwaasa...ssagtAEIFDTLRVLTVVLW.lgYPIVWAVGVEG.lalvqsvgvTSWAYSVLDVFAKYVFAFILLRwvannertvavagqtlgt......mssdd.........................................................
O93741        1    mrsrtyhdqsvcgpygsqrtdcdrdtdagsdtdvhgaqvatqirtdtllhsslwvnialaglsilvflymart...vraNRARLIVGATLMIPLVSLSSYLGLVTGLTAGpiempaahalag..........edvLSQWGRYLTWTLSTPMILLALGWLA.......evDTADLFVVIAADIGMCLTGLAAALTTs.....syafRWAFYLVSTAFFVVVLYALLakwptna...eaagtGDIFGTLRWLTVILW.lgYPILWALGVEG.falvdsvglTSWGYSLLDIGAKYLFAALLLRwvannertiavgqrsgrgaigdpved............................................................
BACT_HALVA    2    .............................................matittwftlgllgellgtavlaygyt....lvpEETRKRYLLLIAIPGIAIVAYALMALGFGSIqs....................eghAVYVVRYVDWLLTTPLNVWFLALLA.......gaSREDTVKLVVLQALTIVFGFAGAVTPs.......pvSYALFAVGGALFGGVIYLLYrniavaakstlsdieVSLYRTLRNFVVVLW.lvYPVVWLLGAAG.vglm.dvetATLVVVYLDVVTKVGFGVIALLamidlgsagetaeeptavagd.................................................................
BACT_NATPH    2    .............................................mvglttlfwlgaigmlvgtlafawagr....dagSGERRYYVTLVGISGIAAVAYVVMALGVGWVpv....................aerTVFAPRYIDWILTTPLIVYFLGLLA.......glDSREFGIVITLNTVVMLAGFAGAMVPg.......ieRYALFGMGAVAFLGLVYYLVgpmtesasq.rssgiKSLYVRLRNLTVILW.aiYPFIWLLGPPG.vall.tptvDVALIVYLDLVTKVGFGFIALDaaatlraehgeslagvdtdapavad.............................................................
BACT_HALSA    2    ..............................................malttwfwvgavgmlagtvlpirdc.....irhPSHRRYDLVLAGITGLAAIAYTTMGLGITATtv....................gdrTVYLARYIDWLVTTPLIVLYLAMLA.......rpGHRTSAWLLAADVFVIAAGIAAALTTg.......vqRWLFFAVGAAGYAALLYGLLgtlpralg..ddprvRSLFVTLRNITVVLW.tlYPVVWLLSPAG.igil.qtemYTIVVVYLDFISKVAFVAFAVLgadavsrlvaadaaapataeptpdgd............................................................
BACS_HALHA    2    .............................................mdavataylggavalivgvafvwllyrs...ldgSPHQSALAPLAIIPVFAGLSYVGMAYDIGTViv....................ngnQIVGLRYIDWLVTTPILVGYVGYAA.......gaSRRSIIGVMVADALMIAVGAGAVVTDg.......tlKWALFGVSSIFHLSLFAYLYvifprvvp..dvpeqIGLFNLLKNHIGLLW.laYPLVWLFGPAG.igea.taagVALTYVFLDVLAKVPYVYFFYArrrvfmhsesppapeqatveataad.............................................................
BAC3_HALVA    2    .............................................mdavavvygitaagfavgvaivgylyas...legSEERSILAALALIPGFAGISYVAMAFGIGTVti....................getTLVGFRYLDWVVTTPLLVGFVGYAA.......gaSRRAIFGVMVADALMILTGVGAVVADg.......tlKWVLFGVSTVFHVSLFAYLYlvfprsvp..ddpqrIGLFSLLKNHIGLLW.iaYPLVWLAGPEG.lgla.tyvgVSITYAFLDLLAKVPYVYFFYArrqvfatkllrdsgevtatpad................................................................
O93743        2    ............................................mtgavtsaywlaavafligvgitaalyak...legSRARTRLAALAVIPGFAGLSYVGMALGIGTVtv....................ngaELVGLRYVDWVVTTPLLVGFIGYNA.......gaSRRAIAGVMIADALMIVFGAAAVVSGg.......tlKWALFGVSALFHVSLFAYLYvifpggip..ddpmqRGLFSLLKNHVGLLW.laYPFVWLMGPAG.igft.gavgAALTYAFLDVLAKVPYVYFFYArrqafidvtdsraaakgdgpavggeapvatgddaptaad...............................................
BACS_HALSS    2    ............................................mtgavsaaywiaavaflvglgitaalyak...lgeSEDRGRLAALAVIPGFAGLAYAGMALGIGTVtv....................ngaELVGLRYVDWIVTTPLLVGFIGYVA.......gaSRRAIAGVMLADALMIAFGAGAVVTGg.......tlKWVLFGVSSIFHVTLFAYLYvvfpravp..ddpmqRGLFSLLKNHVGLLW.laYPFVWLMGPAG.igft.tgvgAALTYAFLDVLAKVPYVYFFYArrqaftdvvsaatadredatdavgdgaptaad......................................................
BACR_HALHA    3    ...........................mlellptavegvsqaqitgrpewiwlalgtalmglgtlyflvkgmg...vsdPDAKKFYAITTLVPAIAFTMYLSMLLGYGLTmvpfgg................eqnPIYWARYADWLFTTPLLLLDLALLV.......daDQGTILALVGADGIMIGTGLVGALTKv......ysyRFVWWAISTAAMLYILYVLFfgftskaes.mrpevASTFKVLRNVTVVLW.saYPVVWLIGSEG.agiv.plniETLLFMVLDVSAKVGFGLILLRsraifgeaeapepsag.dgaaatsd.............................................................
BAC3_HALSD    3    ..............................mdpialqagydllgdgrpetlwlgigtllmligtfyflvrgwg...vtdKDAREYYAVTILVPGIASAAYLSMFFGIGLTevtvgg................emlDIYYARYADWLFTTPLLLLDLALLA.......kvDRVTIGTLVGVDALMIVTGLIGALSHt......aiaRYSWWLFSTICMIVVLYFLAtslrsaake.rgpevASTFNTLTALVLVLW.taYPILWIIGTEG.agvv.glgiETLLFMVLDVTAKVGFGFILLRsrailgdteapepsagadvsaad...............................................................
BAC1_HALS1    3    ............................mdpialtaavgadllgdgrpetlwlgigtllmligtfyfivkgwg...vtdKEAREYYSITILVPGIASAAYLSMFFGIGLTevqvgs................emlDIYYARYADWLFTTPLLLLDLALLA.......kvDRVSIGTLVGVDALMIVTGLVGALSHt......plaRYTWWLFSTICMIVVLYFLAtslraaake.rgpevASTFNTLTALVLVLW.taYPILWIIGTEG.agvv.glgiETLLFMVLDVTAKVGFGFILLRsrailgdteapepsagaeasaad...............................................................
BAC2_HALS2    3    ..............................mdpialqagfdllndgrpetlwlgigtllmligtfyfiargwg...vtdKEAREYYAITILVPGIASAAYLAMFFGIGVTevelasg...............tvlDIYYARYADWLFTTPLLLLDLALLA.......kvDRVTIGTLIGVDALMIVTGLIGALSKt......plaRYTWWLFSTIAFLFVLYYLLtslrsaaak.rseevRSTFNTLTALVAVLW.taYPILWIVGTEG.agvv.glgiETLAFMVLDVTAKVGFGFVLLRsrailgeteapepsagadasaad...............................................................
BACR_HALHM    3    .....................................................gigtllmligtfyfiargwg...vtdKKAREYYAITILVPGIASAAYLSMFFGIGLTtvevagma..............eplEIYYARYADWLFTTPLLLLDLALLA.......naDRTTIGTLIGVDALMIVTGLIGALSHt......plaRYTWWLFSTIAFLFVLYYLLtvlrsaaae.lsedvQTTFNTLTALVAVLW.taYPILWIIGTEG.agvv.glgvETLAFMVLDVTA................................................................................................
BACR_HALAR    3    ..........................................mpepgseaiwlwlgtagmflgmlyfiargwg...etdSRRQKFYIATILITAIAFVNYLAMALGFGLTivefag................eehPIYWARYSDWLFTTPLLLYDLGLLA.......gaDRNTITSLVSLDVLMIGTGLVATLSPgsgvlsagaeRLVWWGISTAFLLVLLYFLFsslsgrvad.lpsdtRSTFKTLRNLVTVVW.lvYPVWWLIGTEG.iglv.gigiETAGFMVIDLTAKVGFGIILLRshgvldgaaettgtgatpadd.................................................................
BACR_HALHP    3    ..................................................iwlwlgtagmflgmlyfiargwg...etdSRRQKFYIATILITAIAFVNYLAMALGFGLTivefag................eehPIYWARYSDWLFTTPLLLYDLGLLA.......gaDRNTITSLVSLDVLMIGTGLVATLSAgsgvlsagaeRLVWWGISTAFLLVLLYFLFsslsgrvad.lpsdtRSTFKTLRNLVTVVW.lvYPVWWLIGTEG.iglv.gigiETAGFMVIDLTA................................................................................................
BACR_HALVA    3    ..........................................mpapegeaiwlwlgtagmflgmlyfiargwg...etdSRRQKFYIATILITAIAFVNYLAMALGFGLTiveiag................eqrPIYWARYSDWLFTTPLLLYDLGLLA.......gaDRNTISSLVSLDVLMIGTGLVATLSAgsgvlsagaeRLVWWGISTAFLLVLLYFLFsslsgrvad.lpsdtRSTFKTLRNLVTVVW.lvYPVWWLVGTEG.iglv.gigiETAGFMVIDLVAKVGFGIILLRshgvldgaaettgagatatad.................................................................
BACR_HALHS    3    ....................................................lwlgtagmflgmlyfiargwg...etdGRRQKFYIATILITAIAFVNYLAMALGFGLTfiefgg................eqhPIYWARYTDWLFTTPLLLYDLGLLA.......gaDRNTIYSLVSLDVLMIGTGVVATLSAgsgvlsagaeRLVWWGISTAFLLVLLYFLFsslsgrvan.lpsdtRSTFKTLRNLVTVVW.lvYPVWWLVGSEG.lglv.gigiETAGFMVIDLVA................................................................................................
BACR_HALSR    3    ...................................mlqsgmstyvpggesiflwvgtagmflgmlyfiargws...vsdQRRQKFYIATIMIAAIAFVNYLSMALGFGVTtielgg................eerAIYWARYTDWLFTTPLLLYDLALLA.......gaDRNTIYSLVGLDVLMIGTGALATLSAgsgvlpagaeRLVWWGISTGFLLVLLYFLFsnltdrase.lsgdlQSKFSTLRNLVLVLW.lvYPVLWLVGTEG.lglv.glpiETAAFMVLDLTAKIGFGIILLQshavldegqtas.egaavad..................................................................
O93740        3    ................................mccaalappmaatvgpesiwlwigtigmtlgtlyfvgrgrg...vrdRKMQEFYIITIFITTIAAAMYFAMATGFGVTevmvgd................ealTIYWARYADWLFTTPLLLLDLSLLA.......gaNRNTIATLIGLDVFMIGTGAIAALSSt......pgtRIAWWAISTGALLALLYVLVgtlsenarn.rapevASLFGRLRNLVIALW.flYPVVWILGTEGtfgil.plywETAAFMVLDLSAKVGFGVILLQsrsvlervatptaapt......................................................................
F123_CORVE    4    ...........................mgnsaldlnpp.natfhlsthgsdwlwaafsvfgvslltvvawtf....trpRGARLFHQIAIVVLTTGSLAYFSMASDLGATpvpvefrge.............gtrQIWFVRYIQWFITFPLLLLELLLAT.......glSLSDIFTTLFMSIVLVITGLVAALVPs.......tyKWGYYTFGVSALFYIWYVLLwhgphttfa.aggvlRRGYILAAGYLSFLL.llYPIAWAC.AEG.gnvi.svtsEMIWYGILDIFAGPIFLFFFLWelrgvdyatfglhsgkytdksayapntaqaagtvpattstgaagnv........................................
YRO2_YEAST    4    .................msdyvellkrggneaikinpptgadfhitsrgsdwlftvfcvnllfgvilvplmf....rkpVKDRFVYYTAIAPNLFMSIAYFTMASNLGWIpvrakynhvqtstq....kehpgyrQIFYARYVGWFLAFPWPIIQMSLLG.......gtPLWQIAFNVGMTEIFTVCWLIAACVHs.......tyKWGYYTIGIGAAIVVCISLMtttfnlvka.rgkdvSNVFITFMSVIMFLWliaYPTCFGI.TDG.gnvl.qpdsATIFYGIIDLLILSILPVLFMPlanylgierlglifdeepaehvgpvaekkmpspasfkssdsdssikeklklkkkhkkdkkkakkakkakkakkaqeeeedvatdse
YD33_YEAST    4    .................mstfetlikrggneaikinpptgadfhitsrgsdwfwtcfccyllfgliltflmf....rkpVNDRFFYLTGIAPNFFMCIAYFTMASNLGWIpvkakynhvqtstq....kehpgyrQIFYSRFVGWFLALPWPIIQICMLA.......gtPFWQMAFNVCITEFFTVCWLIAACVHs.......tyKWGYYTIGLGAAIVVSISVMttsynlvkq.rdndiRLTFLVFFSIIMFLWiiaYPTCFGI.TDG.gnvl.qpdsAGIFYGIIDLILMCFIPTLLVPianhfgadklgyhfgpsdaeavmapkapvasprpaatpnlskdkkkkskkskkskkskksee........................
HS30_YEAST    4    ..................mndtlssflnrnealglnpphgldmhitkrgsdwlwavfavfgfillcyvvmffiaenkgsRLTRYALAPAFLITFFEFFAFFTYASDLGWTgvqaefnhvkvsksit..gevpgirQIFYSKYIAWFLSWPCLLFLIELAAsttgenddiSALDMVHSLLIQIVGTLFWVVSLLVGs...likstyKWGYYTIGAVAMLVTQGVICqrqff.......nlkTRGFNALMLCTCMVIvwlYFICWGL.SDG.gnri.qpdgEAIFYGVLDLCVFAIYPCYLLIavsrdgklprlsltggfshhhatddvedaapetkeavpesprasgetaihepepeaeqavedta......................
O74870        4    .........................mnaklsssgmvlkelpevalqkissnyywavfavfllcaivfplvsif...slpQKQTYHRFFSILS.LVSCLAYFTMACNYGLKnvfssasffrev..........svrMVYYVRYIQWLINFPLIIVMLHWTV.......gvSILEIAYVVCYVLFAIVCLLAAALTSs.......pyKWAYYGFSFVGYFIALAHSVvlhkkyasr.letsaRLGFLWSIVYLHVIW.flYYACWIL.SEG.lnvi.spigEAIFYSILDLFEFGFFGAAFSWmldlvgienfkspqsiplgacspaddkfsmcpdmeaqnqaddlavetriqisnlpssptknnc.......................
Q9UW81        5    ......mihpeqvadmlrpttsttsshvpgpvptvvptpteyqtlgetghrtlwvtfalmvlssgifallswn....vpTSKRLFHVITTLITVVASLSYFAMATGHATTfncdtawdhhkhvpd...tshqvcrQVFWGRYVDWALTTPLLLLELCLLA.......gvDGAHTLMAIVADVIMVLCGLFAALGEg....gntaqKWGWYTIGCFSYLFVIWHVAlhgsrtvta.kgrgvSRLFTGLAVFALLLW.taYPIIWGI.AGG.arrt.nvdtEILIYTVLDLLAKPVFGFWLLLshrampetnidlpgywshglategririgeed......................................................

Key

predicted transmembrane helix    BLUE
helix                            RED
core blocks                      UNDERSCORE
fuzzy blocks                     underscore

You can look at the alignment in RSF format, or MSF format with a Transmembrane Helix Table

You can also get the unaligned sequences in FASTA format

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