Difference between revisions of "Gscope Project"

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* /genomics/''MyProject''
 
* /genomics/''MyProject''
  
* /genomics/''MyProject''/beton
+
* ./beton
* /genomics/''MyProject''/beton/miniconfig
+
* ./beton/miniconfig
  
* /genomics/''MyProject''/fiches
+
* ./fiches
* /genomics/''MyProject''/fiches/bornesdespabs
+
* ./fiches/bornesdespabs
* /genomics/''MyProject''/fiches/lesgenomescomplets
+
* ./fiches/lesgenomescomplets
  
* /genomics/''MyProject''/prottfa
+
* ./prottfa
* /genomics/''MyProject''/protembl
+
* ./protembl
 
and/or  
 
and/or  
* /genomics/''MyProject''/nuctfa
+
* ./nuctfa
* /genomics/''MyProject''/pnucembl
+
* ./pnucembl
  
 
and why not
 
and why not
* /genomics/''MyProject''/blastp
+
* ./blastp
* /genomics/''MyProject''/tblastn
+
* ./tblastn
* /genomics/''MyProject''/blastpMus_musculus
+
* ./blastpMus_musculus
* /genomics/''MyProject''/blastpHomo_sapiens
+
* ./blastpHomo_sapiens
  
* /genomics/''MyProject''/msf
+
* ./msf
* /genomics/''MyProject''/msfMus_musculus
+
* ./msfMus_musculus
  
 
etc.
 
etc.
  
 
All these directories and files are automatically created by Gscope.
 
All these directories and files are automatically created by Gscope.

Revision as of 11:38, 16 April 2009

A Gscope Project is a directory tree containing at least following files (supposing REPERTOIREDUGENOME is /genomics/MyProject)

  • /genomics/MyProject
  • ./beton
  • ./beton/miniconfig
  • ./fiches
  • ./fiches/bornesdespabs
  • ./fiches/lesgenomescomplets
  • ./prottfa
  • ./protembl

and/or

  • ./nuctfa
  • ./pnucembl

and why not

  • ./blastp
  • ./tblastn
  • ./blastpMus_musculus
  • ./blastpHomo_sapiens
  • ./msf
  • ./msfMus_musculus

etc.

All these directories and files are automatically created by Gscope.