Difference between revisions of "ImAnno Search Tool"
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# search by GeneName. You get the corresponding AnnotAct | # search by GeneName. You get the corresponding AnnotAct | ||
# Search in freetext and select comments | # Search in freetext and select comments | ||
− | ===With | + | ===With ImAnno Sieves=== |
# Go to the AnnotActs SearchTool clicking the button | # Go to the AnnotActs SearchTool clicking the button | ||
# First, select some values to define your sieve (within one line we use the union operator) | # First, select some values to define your sieve (within one line we use the union operator) | ||
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# With the ImAnnoEarGeneListsWithDiaVenn [[PipeWork]] you can mix lists from ImAnno, EGE (the Ear Gene Expression data from Sajan) and gene lists from external website such as Jax, ihr, Sanger. | # With the ImAnnoEarGeneListsWithDiaVenn [[PipeWork]] you can mix lists from ImAnno, EGE (the Ear Gene Expression data from Sajan) and gene lists from external website such as Jax, ihr, Sanger. | ||
# It allows also to create Venn's Diagrams with [http://alnitak.u-strasbg.fr/lbgiki/index.php/DiaVenn DiaVenn] | # It allows also to create Venn's Diagrams with [http://alnitak.u-strasbg.fr/lbgiki/index.php/DiaVenn DiaVenn] | ||
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Revision as of 16:17, 24 February 2014
ImAnno provides a set of tools to query the database.
Contents
ImAnno Search Tools
Several searches can be done
By GeneName, Freetext or SelectComments
- search by GeneName. You get the corresponding AnnotAct
- Search in freetext and select comments
With ImAnno Sieves
- Go to the AnnotActs SearchTool clicking the button
- First, select some values to define your sieve (within one line we use the union operator)
- Select the AND or OR value to do an intersection or a union between lines
- Then click on Search to display the result
- Click on Save to save your sieve in order to do the same Annotact Search in the future
- Click on See all sieves to view all stored sieves
- you can edit or delete your sieves
- check on the right side and click on the Correlation button to see the correlations between the seeves