Difference between revisions of "Gscope Project"

From Wikili
Jump to: navigation, search
Line 1: Line 1:
 
A [[Gscope]] Project is a directory tree containing at least following files (supposing REPERTOIREDUGENOME is /genomics/''MyProject'')
 
A [[Gscope]] Project is a directory tree containing at least following files (supposing REPERTOIREDUGENOME is /genomics/''MyProject'')
  
   /genomics/''MyProject''
+
   /genomics/''MyProject''   (which stands for ./ in following lines)
  
 
   ./beton
 
   ./beton

Revision as of 11:40, 16 April 2009

A Gscope Project is a directory tree containing at least following files (supposing REPERTOIREDUGENOME is /genomics/MyProject)

 /genomics/MyProject   (which stands for ./ in following lines)
 ./beton
 ./beton/miniconfig
 ./fiches
 ./fiches/bornesdespabs
 ./fiches/lesgenomescomplets
 ./prottfa
 ./protembl

and/or

 ./nuctfa
 ./pnucembl

and why not

 ./blastp
 ./tblastn
 ./blastpMus_musculus
 ./blastpHomo_sapiens
 ./msf
 ./msfMus_musculus

etc.

All these directories and files are automatically created by Gscope.