--------------------------------------------------- Wednesday, 10 April 2024 16:41:38 Program : /home/moumou/ordali2/bin/ordali options : aabb.tfa -exe tmodee --------------------------------------------------- Tk : 8.6.11 tcl3d : 0.9.5 2024 new biotext loaded biotext : 1.0 combobox : 2.3 LRIPhoto : 1.0 ------------------ => Please wait ... Determiining sequences corresponding to fragments ------------------ Tk : 8.6.11 tcl3d : 0.9.5 biotext : 1.0 combobox : 2.3 LRIPhoto : 1.0 .ordali.lessequences.biotextsequence cmd mapping .ordali.lessequences.biotextsequence cmd see .ordali.lessequences.biotextnom cmd configure .ordali.lessequences.biotextsequence cmd configure .ordali.lessequences.biotextnom cmd configure .ordali.lessequences.biotextsequence cmd configure .ordali.lessequences.biotextnom cmd configure .ordali.lessequences.biotextnom cmd configure .ordali.lessequences.biotextnom cmd configure .ordali.lessequences.biotextnom cmd configure .ordali.lessequences.biotextnom cmd delete .ordali.lessequences.biotextnom cmd tag .ordali.lessequences.biotextnom cmd configure .ordali.lessequences.biotextsequence cmd configure .ordali.lessequences.biotextsequence cmd delete .ordali.lessequences.biotextsequence cmd tag .ordali.lessequences.biotextsequence cmd configure .ordali.lessequences.biotextnom cmd configure .ordali.lessequences.biotextnom cmd tag .ordali.lessequences.biotextnom cmd configure .ordali.lessequences.biotextnom cmd sequences .ordali.lessequences.biotextnom cmd configure .ordali.lessequences.biotextsequence cmd configure .ordali.lessequences.biotextsequence cmd sequences .ordali.lessequences.biotextsequence cmd configure .ordali.lessequences.biotextsequence cmd yview .ordali.lessequences.biotextnom cmd yview .ordali.lessequences.biotextnom cmd configure .ordali.lessequences.biotextnom cmd tag .ordali.lessequences.biotextnom cmd tag .ordali.lessequences.biotextnom cmd tag .ordali.lessequences.biotextnom cmd configure .ordali.lessequences.biotextnom cmd configure .ordali.lessequences.biotextnom cmd tag .ordali.lessequences.biotextnom cmd tag .ordali.lessequences.biotextnom cmd tag .ordali.lessequences.biotextnom cmd configure .ordali.lessequences.biotextsequence cmd tag .ordali.lessequences.biotextsequence cmd cget .ordali.lessequences.biotextsequence cmd cget window 102 20 .ordali.lessequences.biotextnom cmd output nbr noms 10 .ordali.lessequences.biotextsequence cmd output nbr seqs : 10 lgt in 16 .ordali.lessequences.biotextsequence cmd tag .ordali.lessequences.biotextsequence cmd configure .ordali.lessequences.biotextsequence cmd map now mode is seqlab listetype .ordali.lessequences.biotextsequence cmd tag .ordali.lessequences.biotextnom cmd output seq_AADD in 5 push left cursor 2.2 .ordali.lessequences.biotextsequence cmd cursor .ordali.lessequences.biotextsequence cmd push in 16 >ACDEFGHIKLMNPQRS< out 17 >AACDEFGHIKLMNPQRS< start2 0 stop2 1 gap 17 >.ACDEFGHIKLMNPQRS< PushInSeq r=1 icol=3 nextGap=0 == DumpSeqs ====== widget .ordali.lessequences.biotextsequence dans Push apres pushinseq 17 > < 17 >ACD.EFGHIKLMNPQRS< 17 >.AAAA....AAAA....< 17 >.....AACC....AACC< 17 >.AADD....AADD....< 17 >.....AAEE....AAEE< 17 >.CCAA....CCAA....< 17 >.....CCCC....CCCC< 17 >.CCDD....CCDD....< 17 > < =========== left 1 time .ordali.lessequences.biotextsequence cmd push in 17 >ACD.EFGHIKLMNPQRS< out 18 >AACD.EFGHIKLMNPQRS< start2 0 stop2 1 gap 18 >.ACD.EFGHIKLMNPQRS< PushInSeq r=1 icol=3 nextGap=0 == DumpSeqs ====== widget .ordali.lessequences.biotextsequence dans Push apres pushinseq 18 > < 18 >ACD..EFGHIKLMNPQRS< 18 >..AAAA....AAAA....< 18 >......AACC....AACC< 18 >..AADD....AADD....< 18 >......AAEE....AAEE< 18 >..CCAA....CCAA....< 18 >......CCCC....CCCC< 18 >..CCDD....CCDD....< 18 > < =========== left 2 times .ordali.lessequences.biotextsequence cmd push in 18 >ACD..EFGHIKLMNPQRS< out 19 >AACD..EFGHIKLMNPQRS< start2 0 stop2 1 gap 19 >.ACD..EFGHIKLMNPQRS< PushInSeq r=1 icol=3 nextGap=0 == DumpSeqs ====== widget .ordali.lessequences.biotextsequence dans Push apres pushinseq 19 > < 19 >ACD...EFGHIKLMNPQRS< 19 >...AAAA....AAAA....< 19 >.......AACC....AACC< 19 >...AADD....AADD....< 19 >.......AAEE....AAEE< 19 >...CCAA....CCAA....< 19 >.......CCCC....CCCC< 19 >...CCDD....CCDD....< 19 > < =========== left 3 times .ordali.lessequences.biotextsequence cmd push in 19 >ACD...EFGHIKLMNPQRS< out 20 >AACD...EFGHIKLMNPQRS< start2 0 stop2 1 gap 20 >.ACD...EFGHIKLMNPQRS< PushInSeq r=1 icol=3 nextGap=0 == DumpSeqs ====== widget .ordali.lessequences.biotextsequence dans Push apres pushinseq 20 > < 20 >ACD....EFGHIKLMNPQRS< 20 >....AAAA....AAAA....< 20 >........AACC....AACC< 20 >....AADD....AADD....< 20 >........AAEE....AAEE< 20 >....CCAA....CCAA....< 20 >........CCCC....CCCC< 20 >....CCDD....CCDD....< 20 > < =========== left 4 times .ordali.lessequences.biotextsequence cmd push in 20 >ACD....EFGHIKLMNPQRS< out 21 >AACD....EFGHIKLMNPQRS< start2 0 stop2 1 gap 21 >.ACD....EFGHIKLMNPQRS< PushInSeq r=1 icol=3 nextGap=0 == DumpSeqs ====== widget .ordali.lessequences.biotextsequence dans Push apres pushinseq 21 > < 21 >ACD.....EFGHIKLMNPQRS< 21 >.....AAAA....AAAA....< 21 >.........AACC....AACC< 21 >.....AADD....AADD....< 21 >.........AAEE....AAEE< 21 >.....CCAA....CCAA....< 21 >.........CCCC....CCCC< 21 >.....CCDD....CCDD....< 21 > < =========== left 5 times .ordali.lessequences.biotextsequence cmd push in 21 >ACD.....EFGHIKLMNPQRS< out 22 >AACD.....EFGHIKLMNPQRS< start2 0 stop2 1 gap 22 >.ACD.....EFGHIKLMNPQRS< PushInSeq r=1 icol=3 nextGap=0 == DumpSeqs ====== widget .ordali.lessequences.biotextsequence dans Push apres pushinseq 22 > < 22 >ACD......EFGHIKLMNPQRS< 22 >......AAAA....AAAA....< 22 >..........AACC....AACC< 22 >......AADD....AADD....< 22 >..........AAEE....AAEE< 22 >......CCAA....CCAA....< 22 >..........CCCC....CCCC< 22 >......CCDD....CCDD....< 22 > < =========== left 6 times all left pushes dones ! .ordali.lessequences.biotextsequence cmd output lgt is 22 .ordali.lessequences.biotextsequence cmd tag push right .ordali.lessequences.biotextnom cmd output seq_AACC is at 4 .ordali.lessequences.biotextsequence cmd output cursor 2.19 .ordali.lessequences.biotextsequence cmd cursor .ordali.lessequences.biotextsequence cmd cursor cursor at 2.19 .ordali.lessequences.biotextsequence cmd push in 22 >ACD......EFGHIKLMNPQRS< out 23 >ACD......EFGHIKLMNPQRSS< start2 22 stop2 23 gap 23 >ACD......EFGHIKLMNPQRS.< PushInSeq r=1 icol=19 nextGap=22 imax 22 icol 19 == DumpSeqs ====== widget .ordali.lessequences.biotextsequence dans Push apres pushinseq 23 > < 23 >ACD......EFGHIKLMNP.QRS< 23 >......AAAA....AAAA.....< 23 >..........AACC....AACC.< 23 >......AADD....AADD.....< 23 >..........AAEE....AAEE.< 23 >......CCAA....CCAA.....< 23 >..........CCCC....CCCC.< 23 >......CCDD....CCDD.....< 23 > < =========== right 1 time .ordali.lessequences.biotextsequence cmd push in 23 >ACD......EFGHIKLMNP.QRS< out 24 >ACD......EFGHIKLMNP.QRSS< start2 23 stop2 24 gap 24 >ACD......EFGHIKLMNP.QRS.< PushInSeq r=1 icol=20 nextGap=23 imax 23 icol 20 == DumpSeqs ====== widget .ordali.lessequences.biotextsequence dans Push apres pushinseq 24 > < 24 >ACD......EFGHIKLMNP..QRS< 24 >......AAAA....AAAA......< 24 >..........AACC....AACC..< 24 >......AADD....AADD......< 24 >..........AAEE....AAEE..< 24 >......CCAA....CCAA......< 24 >..........CCCC....CCCC..< 24 >......CCDD....CCDD......< 24 > < =========== right 2 times .ordali.lessequences.biotextsequence cmd push in 24 >ACD......EFGHIKLMNP..QRS< out 25 >ACD......EFGHIKLMNP..QRSS< start2 24 stop2 25 gap 25 >ACD......EFGHIKLMNP..QRS.< PushInSeq r=1 icol=21 nextGap=24 imax 24 icol 21 == DumpSeqs ====== widget .ordali.lessequences.biotextsequence dans Push apres pushinseq 25 > < 25 >ACD......EFGHIKLMNP...QRS< 25 >......AAAA....AAAA.......< 25 >..........AACC....AACC...< 25 >......AADD....AADD.......< 25 >..........AAEE....AAEE...< 25 >......CCAA....CCAA.......< 25 >..........CCCC....CCCC...< 25 >......CCDD....CCDD.......< 25 > < =========== right 3 times .ordali.lessequences.biotextsequence cmd push in 25 >ACD......EFGHIKLMNP...QRS< out 26 >ACD......EFGHIKLMNP...QRSS< start2 25 stop2 26 gap 26 >ACD......EFGHIKLMNP...QRS.< PushInSeq r=1 icol=22 nextGap=25 imax 25 icol 22 == DumpSeqs ====== widget .ordali.lessequences.biotextsequence dans Push apres pushinseq 26 > < 26 >ACD......EFGHIKLMNP....QRS< 26 >......AAAA....AAAA........< 26 >..........AACC....AACC....< 26 >......AADD....AADD........< 26 >..........AAEE....AAEE....< 26 >......CCAA....CCAA........< 26 >..........CCCC....CCCC....< 26 >......CCDD....CCDD........< 26 > < =========== right 4 times .ordali.lessequences.biotextsequence cmd push in 26 >ACD......EFGHIKLMNP....QRS< out 27 >ACD......EFGHIKLMNP....QRSS< start2 26 stop2 27 gap 27 >ACD......EFGHIKLMNP....QRS.< PushInSeq r=1 icol=23 nextGap=26 imax 26 icol 23 == DumpSeqs ====== widget .ordali.lessequences.biotextsequence dans Push apres pushinseq 27 > < 27 >ACD......EFGHIKLMNP.....QRS< 27 >......AAAA....AAAA.........< 27 >..........AACC....AACC.....< 27 >......AADD....AADD.........< 27 >..........AAEE....AAEE.....< 27 >......CCAA....CCAA.........< 27 >..........CCCC....CCCC.....< 27 >......CCDD....CCDD.........< 27 > < =========== right 5 times .ordali.lessequences.biotextsequence cmd push in 27 >ACD......EFGHIKLMNP.....QRS< out 28 >ACD......EFGHIKLMNP.....QRSS< start2 27 stop2 28 gap 28 >ACD......EFGHIKLMNP.....QRS.< PushInSeq r=1 icol=24 nextGap=27 imax 27 icol 24 == DumpSeqs ====== widget .ordali.lessequences.biotextsequence dans Push apres pushinseq 28 > < 28 >ACD......EFGHIKLMNP......QRS< 28 >......AAAA....AAAA..........< 28 >..........AACC....AACC......< 28 >......AADD....AADD..........< 28 >..........AAEE....AAEE......< 28 >......CCAA....CCAA..........< 28 >..........CCCC....CCCC......< 28 >......CCDD....CCDD..........< 28 > < =========== right 6 times .ordali.lessequences.biotextsequence cmd push in 28 >ACD......EFGHIKLMNP......QRS< out 29 >ACD......EFGHIKLMNP......QRSS< start2 28 stop2 29 gap 29 >ACD......EFGHIKLMNP......QRS.< PushInSeq r=1 icol=25 nextGap=28 imax 28 icol 25 == DumpSeqs ====== widget .ordali.lessequences.biotextsequence dans Push apres pushinseq 29 > < 29 >ACD......EFGHIKLMNP.......QRS< 29 >......AAAA....AAAA...........< 29 >..........AACC....AACC.......< 29 >......AADD....AADD...........< 29 >..........AAEE....AAEE.......< 29 >......CCAA....CCAA...........< 29 >..........CCCC....CCCC.......< 29 >......CCDD....CCDD...........< 29 > < =========== right 7 times all right pushes done ! .ordali.lessequences.biotextsequence cmd output lgt APRES right 29 .ordali.lessequences.biotextsequence cmd output 29 > < 29 >ACD......EFGHIKLMNP.......QRS< 29 >......AAAA....AAAA...........< 29 >..........AACC....AACC.......< 29 >......AADD....AADD...........< 29 >..........AAEE....AAEE.......< 29 >......CCAA....CCAA...........< 29 >..........CCCC....CCCC.......< 29 >......CCDD....CCDD...........< 29 > < .ordali.lessequences.biotextsequence cmd tag cut noms .ordali.lessequences.biotextnom cmd cut deleteing row 3 deleteing row 2 cut seqs .ordali.lessequences.biotextsequence cmd cut deleteing row 3 deleteing row 2 paste noms .ordali.lessequences.biotextnom cmd paste paste seqs .ordali.lessequences.biotextsequence cmd paste paste done ! .ordali.lessequences.biotextsequence cmd output 29 > < 29 >ACD......EFGHIKLMNP.......QRS< 29 >......AADD....AADD...........< 29 >..........AAEE....AAEE.......< 29 >......AAAA....AAAA...........< 29 >..........AACC....AACC.......< 29 >......CCAA....CCAA...........< 29 >..........CCCC....CCCC.......< 29 >......CCDD....CCDD...........< 29 > < very all done !