Crystallographic Information File browser    Powered by zincr within Tanzer
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      This Crystallographic Information File browser gives acces to the content of the Cif file
      Data are stored in two ways, SimpleKey - value, or LoopKeys whith lists of values.
      
      First select a Cif file
            give a CifEntry (ie 1qru) it will be dowloaded from  https://files.rcsb.org/download/1qru.cif"
         or get existing files from the server
         or upload a cif file from your computer
      
      Some relevant data are automatically displayed on the main page
      In the left part of the page click on a GlobalKey, a SimpleKey or a LoopKey with subkey 

      Get help about available Cif functions with Cif Help, CifAsym Help, CifEntity Help, etc
      All these functions can be called in command line mode
          or from any other program querying gscope directly
          or through the CafeDesScience (qds Zero Cif Help)
          or as webservice (see Cif Help)
          

      See the 3d structure with the Ngl button
      
      Raymond
      
To get a Cif file :    Give a cif entry    or    Get a file from the server Get a file from the server and press    or    Upload your file Upload your file : first then select the server directory and ... current Cif store/synthetases/1LI7.cif


see global keys
Cif Help Cif File Value Cif Text Cif ValuesOf SimpleKeys Cif ListOf Key Cif ListOf SimpleKey Cif ListOf SimpleKeyClass Cif ListOf LoopKey Cif ListOf LoopKeyClass Cif AsymAndEntities Cif _entity ListOfLines CifEntity CifEntity Help CifEntity 2 _entity pdbx_description CifEntity 2 Sequence CifEx Help CifAsym Help CifAsym ListOf LabelAuth CifAsym ListOf Label CifAsym L Auth CifAsym A Label CifAsym Auth_A _entity.id
see simple Cif keys
Cif _entry.id Cif _audit_conform.dict_name Cif _audit_conform.dict_version Cif _audit_conform.dict_location Cif _pdbx_database_related.db_name Cif _pdbx_database_related.db_id Cif _pdbx_database_related.details Cif _pdbx_database_related.content_type Cif _pdbx_database_status.status_code Cif _pdbx_database_status.entry_id Cif _pdbx_database_status.recvd_initial_deposition_date Cif _pdbx_database_status.deposit_site Cif _pdbx_database_status.process_site Cif _pdbx_database_status.status_code_sf Cif _pdbx_database_status.status_code_mr Cif _pdbx_database_status.SG_entry Cif _pdbx_database_status.pdb_format_compatible Cif _pdbx_database_status.status_code_cs Cif _cell.entry_id Cif _cell.length_a Cif _cell.length_b Cif _cell.length_c Cif _cell.angle_alpha Cif _cell.angle_beta Cif _cell.angle_gamma Cif _cell.Z_PDB Cif _cell.pdbx_unique_axis Cif _cell.length_a_esd Cif _cell.length_b_esd Cif _cell.length_c_esd Cif _cell.angle_alpha_esd Cif _cell.angle_beta_esd Cif _cell.angle_gamma_esd Cif _symmetry.entry_id Cif _symmetry.space_group_name_H-M Cif _symmetry.pdbx_full_space_group_name_H-M Cif _symmetry.cell_setting Cif _symmetry.Int_Tables_number Cif _symmetry.space_group_name_Hall Cif _entity_name_com.entity_id Cif _entity_name_com.name Cif _entity_name_sys.entity_id Cif _entity_name_sys.name Cif _entity_poly.entity_id Cif _entity_poly.type Cif _entity_poly.nstd_linkage Cif _entity_poly.nstd_monomer Cif _entity_poly.pdbx_seq_one_letter_code Cif _entity_poly.pdbx_seq_one_letter_code_can Cif _entity_poly.pdbx_strand_id Cif _entity_poly.pdbx_target_identifier Cif _entity_src_gen.entity_id Cif _entity_src_gen.pdbx_src_id Cif _entity_src_gen.pdbx_alt_source_flag Cif _entity_src_gen.pdbx_seq_type Cif _entity_src_gen.pdbx_beg_seq_num Cif _entity_src_gen.pdbx_end_seq_num Cif _entity_src_gen.gene_src_common_name Cif _entity_src_gen.gene_src_genus Cif _entity_src_gen.pdbx_gene_src_gene Cif _entity_src_gen.gene_src_species Cif _entity_src_gen.gene_src_strain Cif _entity_src_gen.gene_src_tissue Cif _entity_src_gen.gene_src_tissue_fraction Cif _entity_src_gen.gene_src_details Cif _entity_src_gen.pdbx_gene_src_fragment Cif _entity_src_gen.pdbx_gene_src_scientific_name Cif _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id Cif _entity_src_gen.pdbx_gene_src_variant Cif _entity_src_gen.pdbx_gene_src_cell_line Cif _entity_src_gen.pdbx_gene_src_atcc Cif _entity_src_gen.pdbx_gene_src_organ Cif _entity_src_gen.pdbx_gene_src_organelle Cif _entity_src_gen.pdbx_gene_src_cell Cif _entity_src_gen.pdbx_gene_src_cellular_location Cif _entity_src_gen.host_org_common_name Cif _entity_src_gen.pdbx_host_org_scientific_name Cif _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id Cif _entity_src_gen.host_org_genus Cif _entity_src_gen.pdbx_host_org_gene Cif _entity_src_gen.pdbx_host_org_organ Cif _entity_src_gen.host_org_species Cif _entity_src_gen.pdbx_host_org_tissue Cif _entity_src_gen.pdbx_host_org_tissue_fraction Cif _entity_src_gen.pdbx_host_org_strain Cif _entity_src_gen.pdbx_host_org_variant Cif _entity_src_gen.pdbx_host_org_cell_line Cif _entity_src_gen.pdbx_host_org_atcc Cif _entity_src_gen.pdbx_host_org_culture_collection Cif _entity_src_gen.pdbx_host_org_cell Cif _entity_src_gen.pdbx_host_org_organelle Cif _entity_src_gen.pdbx_host_org_cellular_location Cif _entity_src_gen.pdbx_host_org_vector_type Cif _entity_src_gen.pdbx_host_org_vector Cif _entity_src_gen.host_org_details Cif _entity_src_gen.expression_system_id Cif _entity_src_gen.plasmid_name Cif _entity_src_gen.plasmid_details Cif _entity_src_gen.pdbx_description Cif _struct_ref.id Cif _struct_ref.entity_id Cif _struct_ref.db_name Cif _struct_ref.pdbx_db_accession Cif _struct_ref.db_code Cif _struct_ref.pdbx_align_begin Cif _struct_ref.pdbx_seq_one_letter_code Cif _struct_ref.pdbx_db_isoform Cif _exptl.entry_id Cif _exptl.method Cif _exptl.crystals_number Cif _exptl_crystal.id Cif _exptl_crystal.density_meas Cif _exptl_crystal.density_Matthews Cif _exptl_crystal.density_percent_sol Cif _exptl_crystal.description Cif _exptl_crystal.F_000 Cif _exptl_crystal.preparation Cif _exptl_crystal_grow.crystal_id Cif _exptl_crystal_grow.method Cif _exptl_crystal_grow.temp Cif _exptl_crystal_grow.temp_details Cif _exptl_crystal_grow.pH Cif _exptl_crystal_grow.pdbx_details Cif _exptl_crystal_grow.pdbx_pH_range Cif _diffrn.id Cif _diffrn.ambient_temp Cif _diffrn.ambient_temp_details Cif _diffrn.crystal_id Cif _diffrn_detector.diffrn_id Cif _diffrn_detector.detector Cif _diffrn_detector.type Cif _diffrn_detector.pdbx_collection_date Cif _diffrn_detector.details Cif _diffrn_radiation.diffrn_id Cif _diffrn_radiation.wavelength_id Cif _diffrn_radiation.pdbx_monochromatic_or_laue_m_l Cif _diffrn_radiation.monochromator Cif _diffrn_radiation.pdbx_diffrn_protocol Cif _diffrn_radiation.pdbx_scattering_type Cif _diffrn_radiation_wavelength.id Cif _diffrn_radiation_wavelength.wavelength Cif _diffrn_radiation_wavelength.wt Cif _diffrn_source.diffrn_id Cif _diffrn_source.source Cif _diffrn_source.type Cif _diffrn_source.pdbx_synchrotron_site Cif _diffrn_source.pdbx_synchrotron_beamline Cif _diffrn_source.pdbx_wavelength Cif _diffrn_source.pdbx_wavelength_list Cif _reflns.entry_id Cif _reflns.observed_criterion_sigma_I Cif _reflns.observed_criterion_sigma_F Cif _reflns.d_resolution_low Cif _reflns.d_resolution_high Cif _reflns.number_obs Cif _reflns.number_all Cif _reflns.percent_possible_obs Cif _reflns.pdbx_Rmerge_I_obs Cif _reflns.pdbx_Rsym_value Cif _reflns.pdbx_netI_over_sigmaI Cif _reflns.B_iso_Wilson_estimate Cif _reflns.pdbx_redundancy Cif _reflns.R_free_details Cif _reflns.limit_h_max Cif _reflns.limit_h_min Cif _reflns.limit_k_max Cif _reflns.limit_k_min Cif _reflns.limit_l_max Cif _reflns.limit_l_min Cif _reflns.observed_criterion_F_max Cif _reflns.observed_criterion_F_min Cif _reflns.pdbx_chi_squared Cif _reflns.pdbx_scaling_rejects Cif _reflns.pdbx_diffrn_id Cif _reflns.pdbx_ordinal Cif _reflns_shell.d_res_high Cif _reflns_shell.d_res_low Cif _reflns_shell.percent_possible_all Cif _reflns_shell.Rmerge_I_obs Cif _reflns_shell.pdbx_Rsym_value Cif _reflns_shell.meanI_over_sigI_obs Cif _reflns_shell.pdbx_redundancy Cif _reflns_shell.percent_possible_obs Cif _reflns_shell.number_unique_all Cif _reflns_shell.number_measured_all Cif _reflns_shell.number_measured_obs Cif _reflns_shell.number_unique_obs Cif _reflns_shell.pdbx_chi_squared Cif _reflns_shell.pdbx_diffrn_id Cif _reflns_shell.pdbx_ordinal Cif _refine.entry_id Cif _refine.ls_number_reflns_obs Cif _refine.ls_number_reflns_all Cif _refine.pdbx_ls_sigma_I Cif _refine.pdbx_ls_sigma_F Cif _refine.pdbx_data_cutoff_high_absF Cif _refine.pdbx_data_cutoff_low_absF Cif _refine.ls_d_res_low Cif _refine.ls_d_res_high Cif _refine.ls_percent_reflns_obs Cif _refine.ls_R_factor_obs Cif _refine.ls_R_factor_all Cif _refine.ls_R_factor_R_work Cif _refine.ls_R_factor_R_free Cif _refine.ls_R_factor_R_free_error Cif _refine.ls_R_factor_R_free_error_details Cif _refine.ls_percent_reflns_R_free Cif _refine.ls_number_reflns_R_free Cif _refine.ls_number_parameters Cif _refine.ls_number_restraints Cif _refine.occupancy_min Cif _refine.occupancy_max Cif _refine.correlation_coeff_Fo_to_Fc Cif _refine.correlation_coeff_Fo_to_Fc_free Cif _refine.B_iso_mean Cif _refine.solvent_model_details Cif _refine.solvent_model_param_ksol Cif _refine.solvent_model_param_bsol Cif _refine.pdbx_solvent_vdw_probe_radii Cif _refine.pdbx_solvent_ion_probe_radii Cif _refine.pdbx_solvent_shrinkage_radii Cif _refine.pdbx_ls_cross_valid_method Cif _refine.details Cif _refine.pdbx_starting_model Cif _refine.pdbx_method_to_determine_struct Cif _refine.pdbx_isotropic_thermal_model Cif _refine.pdbx_stereochemistry_target_values Cif _refine.pdbx_stereochem_target_val_spec_case Cif _refine.pdbx_R_Free_selection_details Cif _refine.pdbx_overall_ESU_R_Free Cif _refine.overall_SU_B Cif _refine.ls_redundancy_reflns_obs Cif _refine.B_iso_min Cif _refine.B_iso_max Cif _refine.overall_SU_R_Cruickshank_DPI Cif _refine.overall_SU_R_free Cif _refine.overall_SU_ML Cif _refine.pdbx_overall_ESU_R Cif _refine.pdbx_data_cutoff_high_rms_absF Cif _refine.ls_wR_factor_R_free Cif _refine.ls_wR_factor_R_work Cif _refine.overall_FOM_free_R_set Cif _refine.overall_FOM_work_R_set Cif _refine.pdbx_refine_id Cif _refine.pdbx_diffrn_id Cif _refine.pdbx_TLS_residual_ADP_flag Cif _refine.pdbx_overall_phase_error Cif _refine.pdbx_overall_SU_R_free_Cruickshank_DPI Cif _refine.pdbx_overall_SU_R_Blow_DPI Cif _refine.pdbx_overall_SU_R_free_Blow_DPI Cif _refine_analyze.entry_id Cif _refine_analyze.Luzzati_coordinate_error_obs Cif _refine_analyze.Luzzati_sigma_a_obs Cif _refine_analyze.Luzzati_d_res_low_obs Cif _refine_analyze.Luzzati_coordinate_error_free Cif _refine_analyze.Luzzati_sigma_a_free Cif _refine_analyze.Luzzati_d_res_low_free Cif _refine_analyze.number_disordered_residues Cif _refine_analyze.occupancy_sum_hydrogen Cif _refine_analyze.occupancy_sum_non_hydrogen Cif _refine_analyze.pdbx_Luzzati_d_res_high_obs Cif _refine_analyze.pdbx_refine_id Cif _refine_hist.pdbx_refine_id Cif _refine_hist.cycle_id Cif _refine_hist.pdbx_number_atoms_protein Cif _refine_hist.pdbx_number_atoms_nucleic_acid Cif _refine_hist.pdbx_number_atoms_ligand Cif _refine_hist.number_atoms_solvent Cif _refine_hist.number_atoms_total Cif _refine_hist.d_res_high Cif _refine_hist.d_res_low Cif _refine_ls_shell.pdbx_total_number_of_bins_used Cif _refine_ls_shell.d_res_high Cif _refine_ls_shell.d_res_low Cif _refine_ls_shell.number_reflns_R_work Cif _refine_ls_shell.R_factor_R_work Cif _refine_ls_shell.percent_reflns_obs Cif _refine_ls_shell.R_factor_R_free Cif _refine_ls_shell.R_factor_R_free_error Cif _refine_ls_shell.percent_reflns_R_free Cif _refine_ls_shell.number_reflns_R_free Cif _refine_ls_shell.number_reflns_obs Cif _refine_ls_shell.redundancy_reflns_obs Cif _refine_ls_shell.number_reflns_all Cif _refine_ls_shell.R_factor_all Cif _refine_ls_shell.pdbx_refine_id Cif _struct.entry_id Cif _struct.title Cif _struct.pdbx_descriptor Cif _struct.pdbx_model_details Cif _struct.pdbx_CASP_flag Cif _struct.pdbx_model_type_details Cif _struct_keywords.entry_id Cif _struct_keywords.pdbx_keywords Cif _struct_keywords.text Cif _struct_conf_type.id Cif _struct_conf_type.criteria Cif _struct_conf_type.reference Cif _struct_conn_type.id Cif _struct_conn_type.criteria Cif _struct_conn_type.reference Cif _database_PDB_matrix.entry_id Cif _atom_sites.entry_id Cif _pdbx_struct_oper_list.id Cif _pdbx_struct_oper_list.type Cif _pdbx_struct_oper_list.name Cif _pdbx_struct_oper_list.symmetry_operation Cif _pdbx_audit_revision_details.ordinal Cif _pdbx_audit_revision_details.revision_ordinal Cif _pdbx_audit_revision_details.data_content_type Cif _pdbx_audit_revision_details.provider Cif _pdbx_audit_revision_details.type Cif _pdbx_audit_revision_details.description Cif _pdbx_validate_main_chain_plane.id Cif _pdbx_validate_main_chain_plane.PDB_model_num Cif _pdbx_validate_main_chain_plane.auth_comp_id Cif _pdbx_validate_main_chain_plane.auth_asym_id Cif _pdbx_validate_main_chain_plane.auth_seq_id Cif _pdbx_validate_main_chain_plane.PDB_ins_code Cif _pdbx_validate_main_chain_plane.label_alt_id Cif _pdbx_validate_main_chain_plane.improper_torsion_angle
see Loop Cif keys
0 Cif _database_2 LoopLength = 3 0 Cif _database_2 ListOfLines 0 Cif _database_2.database_id 0 Cif _database_2.database_code 1 Cif _audit_author LoopLength = 3 1 Cif _audit_author ListOfLines 1 Cif _audit_author.name 1 Cif _audit_author.pdbx_ordinal 2 Cif _citation LoopLength = 2 2 Cif _citation ListOfLines 2 Cif _citation.id 2 Cif _citation.title 2 Cif _citation.journal_abbrev 2 Cif _citation.journal_volume 2 Cif _citation.page_first 2 Cif _citation.page_last 2 Cif _citation.year 2 Cif _citation.journal_id_ASTM 2 Cif _citation.country 2 Cif _citation.journal_id_ISSN 2 Cif _citation.journal_id_CSD 2 Cif _citation.book_publisher 2 Cif _citation.pdbx_database_id_PubMed 2 Cif _citation.pdbx_database_id_DOI 3 Cif _citation_author LoopLength = 7 3 Cif _citation_author ListOfLines 3 Cif _citation_author.citation_id 3 Cif _citation_author.name 3 Cif _citation_author.ordinal 4 Cif _entity LoopLength = 4 4 Cif _entity ListOfLines 4 Cif _entity.id 4 Cif _entity.type 4 Cif _entity.src_method 4 Cif _entity.pdbx_description 4 Cif _entity.formula_weight 4 Cif _entity.pdbx_number_of_molecules 4 Cif _entity.pdbx_ec 4 Cif _entity.pdbx_mutation 4 Cif _entity.pdbx_fragment 4 Cif _entity.details 5 Cif _entity_poly_seq LoopLength = 461 5 Cif _entity_poly_seq ListOfLines 5 Cif _entity_poly_seq.entity_id 5 Cif _entity_poly_seq.num 5 Cif _entity_poly_seq.mon_id 5 Cif _entity_poly_seq.hetero 6 Cif _struct_ref_seq LoopLength = 2 6 Cif _struct_ref_seq ListOfLines 6 Cif _struct_ref_seq.align_id 6 Cif _struct_ref_seq.ref_id 6 Cif _struct_ref_seq.pdbx_PDB_id_code 6 Cif _struct_ref_seq.pdbx_strand_id 6 Cif _struct_ref_seq.seq_align_beg 6 Cif _struct_ref_seq.pdbx_seq_align_beg_ins_code 6 Cif _struct_ref_seq.seq_align_end 6 Cif _struct_ref_seq.pdbx_seq_align_end_ins_code 6 Cif _struct_ref_seq.pdbx_db_accession 6 Cif _struct_ref_seq.db_align_beg 6 Cif _struct_ref_seq.pdbx_db_align_beg_ins_code 6 Cif _struct_ref_seq.db_align_end 6 Cif _struct_ref_seq.pdbx_db_align_end_ins_code 6 Cif _struct_ref_seq.pdbx_auth_seq_align_beg 6 Cif _struct_ref_seq.pdbx_auth_seq_align_end 7 Cif _chem_comp LoopLength = 22 7 Cif _chem_comp ListOfLines 7 Cif _chem_comp.id 7 Cif _chem_comp.type 7 Cif _chem_comp.mon_nstd_flag 7 Cif _chem_comp.name 7 Cif _chem_comp.pdbx_synonyms 7 Cif _chem_comp.formula 7 Cif _chem_comp.formula_weight 8 Cif _refine_ls_restr LoopLength = 8 8 Cif _refine_ls_restr ListOfLines 8 Cif _refine_ls_restr.type 8 Cif _refine_ls_restr.dev_ideal 8 Cif _refine_ls_restr.dev_ideal_target 8 Cif _refine_ls_restr.weight 8 Cif _refine_ls_restr.number 8 Cif _refine_ls_restr.pdbx_refine_id 8 Cif _refine_ls_restr.pdbx_restraint_function 9 Cif _pdbx_xplor_file LoopLength = 4 9 Cif _pdbx_xplor_file ListOfLines 9 Cif _pdbx_xplor_file.serial_no 9 Cif _pdbx_xplor_file.param_file 9 Cif _pdbx_xplor_file.topol_file 9 Cif _pdbx_xplor_file.pdbx_refine_id 10 Cif _struct_asym LoopLength = 8 10 Cif _struct_asym ListOfLines 10 Cif _struct_asym.id 10 Cif _struct_asym.pdbx_blank_PDB_chainid_flag 10 Cif _struct_asym.pdbx_modified 10 Cif _struct_asym.entity_id 10 Cif _struct_asym.details 11 Cif _struct_biol LoopLength = 2 11 Cif _struct_biol ListOfLines 11 Cif _struct_biol.id 11 Cif _struct_biol.details 11 Cif _struct_biol.pdbx_parent_biol_id 12 Cif _struct_conf LoopLength = 32 12 Cif _struct_conf ListOfLines 12 Cif _struct_conf.conf_type_id 12 Cif _struct_conf.id 12 Cif _struct_conf.pdbx_PDB_helix_id 12 Cif _struct_conf.beg_label_comp_id 12 Cif _struct_conf.beg_label_asym_id 12 Cif _struct_conf.beg_label_seq_id 12 Cif _struct_conf.pdbx_beg_PDB_ins_code 12 Cif _struct_conf.end_label_comp_id 12 Cif _struct_conf.end_label_asym_id 12 Cif _struct_conf.end_label_seq_id 12 Cif _struct_conf.pdbx_end_PDB_ins_code 12 Cif _struct_conf.beg_auth_comp_id 12 Cif _struct_conf.beg_auth_asym_id 12 Cif _struct_conf.beg_auth_seq_id 12 Cif _struct_conf.end_auth_comp_id 12 Cif _struct_conf.end_auth_asym_id 12 Cif _struct_conf.end_auth_seq_id 12 Cif _struct_conf.pdbx_PDB_helix_class 12 Cif _struct_conf.details 12 Cif _struct_conf.pdbx_PDB_helix_length 13 Cif _struct_conn LoopLength = 9 13 Cif _struct_conn ListOfLines 13 Cif _struct_conn.id 13 Cif _struct_conn.conn_type_id 13 Cif _struct_conn.pdbx_leaving_atom_flag 13 Cif _struct_conn.pdbx_PDB_id 13 Cif _struct_conn.ptnr1_label_asym_id 13 Cif _struct_conn.ptnr1_label_comp_id 13 Cif _struct_conn.ptnr1_label_seq_id 13 Cif _struct_conn.ptnr1_label_atom_id 13 Cif _struct_conn.pdbx_ptnr1_label_alt_id 13 Cif _struct_conn.pdbx_ptnr1_PDB_ins_code 13 Cif _struct_conn.pdbx_ptnr1_standard_comp_id 13 Cif _struct_conn.ptnr1_symmetry 13 Cif _struct_conn.ptnr2_label_asym_id 13 Cif _struct_conn.ptnr2_label_comp_id 13 Cif _struct_conn.ptnr2_label_seq_id 13 Cif _struct_conn.ptnr2_label_atom_id 13 Cif _struct_conn.pdbx_ptnr2_label_alt_id 13 Cif _struct_conn.pdbx_ptnr2_PDB_ins_code 13 Cif _struct_conn.ptnr1_auth_asym_id 13 Cif _struct_conn.ptnr1_auth_comp_id 13 Cif _struct_conn.ptnr1_auth_seq_id 13 Cif _struct_conn.ptnr2_auth_asym_id 13 Cif _struct_conn.ptnr2_auth_comp_id 13 Cif _struct_conn.ptnr2_auth_seq_id 13 Cif _struct_conn.ptnr2_symmetry 13 Cif _struct_conn.pdbx_ptnr3_label_atom_id 13 Cif _struct_conn.pdbx_ptnr3_label_seq_id 13 Cif _struct_conn.pdbx_ptnr3_label_comp_id 13 Cif _struct_conn.pdbx_ptnr3_label_asym_id 13 Cif _struct_conn.pdbx_ptnr3_label_alt_id 13 Cif _struct_conn.pdbx_ptnr3_PDB_ins_code 13 Cif _struct_conn.details 13 Cif _struct_conn.pdbx_dist_value 13 Cif _struct_conn.pdbx_value_order 14 Cif _struct_sheet LoopLength = 8 14 Cif _struct_sheet ListOfLines 14 Cif _struct_sheet.id 14 Cif _struct_sheet.type 14 Cif _struct_sheet.number_strands 14 Cif _struct_sheet.details 15 Cif _struct_sheet_order LoopLength = 16 15 Cif _struct_sheet_order ListOfLines 15 Cif _struct_sheet_order.sheet_id 15 Cif _struct_sheet_order.range_id_1 15 Cif _struct_sheet_order.range_id_2 15 Cif _struct_sheet_order.offset 15 Cif _struct_sheet_order.sense 16 Cif _struct_sheet_range LoopLength = 24 16 Cif _struct_sheet_range ListOfLines 16 Cif _struct_sheet_range.sheet_id 16 Cif _struct_sheet_range.id 16 Cif _struct_sheet_range.beg_label_comp_id 16 Cif _struct_sheet_range.beg_label_asym_id 16 Cif _struct_sheet_range.beg_label_seq_id 16 Cif _struct_sheet_range.pdbx_beg_PDB_ins_code 16 Cif _struct_sheet_range.end_label_comp_id 16 Cif _struct_sheet_range.end_label_asym_id 16 Cif _struct_sheet_range.end_label_seq_id 16 Cif _struct_sheet_range.pdbx_end_PDB_ins_code 16 Cif _struct_sheet_range.beg_auth_comp_id 16 Cif _struct_sheet_range.beg_auth_asym_id 16 Cif _struct_sheet_range.beg_auth_seq_id 16 Cif _struct_sheet_range.end_auth_comp_id 16 Cif _struct_sheet_range.end_auth_asym_id 16 Cif _struct_sheet_range.end_auth_seq_id 17 Cif _pdbx_struct_sheet_hbond LoopLength = 16 17 Cif _pdbx_struct_sheet_hbond ListOfLines 17 Cif _pdbx_struct_sheet_hbond.sheet_id 17 Cif _pdbx_struct_sheet_hbond.range_id_1 17 Cif _pdbx_struct_sheet_hbond.range_id_2 17 Cif _pdbx_struct_sheet_hbond.range_1_label_atom_id 17 Cif _pdbx_struct_sheet_hbond.range_1_label_comp_id 17 Cif _pdbx_struct_sheet_hbond.range_1_label_asym_id 17 Cif _pdbx_struct_sheet_hbond.range_1_label_seq_id 17 Cif _pdbx_struct_sheet_hbond.range_1_PDB_ins_code 17 Cif _pdbx_struct_sheet_hbond.range_1_auth_atom_id 17 Cif _pdbx_struct_sheet_hbond.range_1_auth_comp_id 17 Cif _pdbx_struct_sheet_hbond.range_1_auth_asym_id 17 Cif _pdbx_struct_sheet_hbond.range_1_auth_seq_id 17 Cif _pdbx_struct_sheet_hbond.range_2_label_atom_id 17 Cif _pdbx_struct_sheet_hbond.range_2_label_comp_id 17 Cif _pdbx_struct_sheet_hbond.range_2_label_asym_id 17 Cif _pdbx_struct_sheet_hbond.range_2_label_seq_id 17 Cif _pdbx_struct_sheet_hbond.range_2_PDB_ins_code 17 Cif _pdbx_struct_sheet_hbond.range_2_auth_atom_id 17 Cif _pdbx_struct_sheet_hbond.range_2_auth_comp_id 17 Cif _pdbx_struct_sheet_hbond.range_2_auth_asym_id 17 Cif _pdbx_struct_sheet_hbond.range_2_auth_seq_id 18 Cif _struct_site LoopLength = 4 18 Cif _struct_site ListOfLines 18 Cif _struct_site.id 18 Cif _struct_site.pdbx_evidence_code 18 Cif _struct_site.pdbx_auth_asym_id 18 Cif _struct_site.pdbx_auth_comp_id 18 Cif _struct_site.pdbx_auth_seq_id 18 Cif _struct_site.pdbx_auth_ins_code 18 Cif _struct_site.pdbx_num_residues 18 Cif _struct_site.details 19 Cif _struct_site_gen LoopLength = 29 19 Cif _struct_site_gen ListOfLines 19 Cif _struct_site_gen.id 19 Cif _struct_site_gen.site_id 19 Cif _struct_site_gen.pdbx_num_res 19 Cif _struct_site_gen.label_comp_id 19 Cif _struct_site_gen.label_asym_id 19 Cif _struct_site_gen.label_seq_id 19 Cif _struct_site_gen.pdbx_auth_ins_code 19 Cif _struct_site_gen.auth_comp_id 19 Cif _struct_site_gen.auth_asym_id 19 Cif _struct_site_gen.auth_seq_id 19 Cif _struct_site_gen.label_atom_id 19 Cif _struct_site_gen.label_alt_id 19 Cif _struct_site_gen.symmetry 19 Cif _struct_site_gen.details 20 Cif _atom_type LoopLength = 5 20 Cif _atom_type ListOfLines 20 Cif _atom_type.symbol 21 Cif _atom_site LoopLength = 5827 21 Cif _atom_site ListOfLines 21 Cif _atom_site.group_PDB 21 Cif _atom_site.id 21 Cif _atom_site.type_symbol 21 Cif _atom_site.label_atom_id 21 Cif _atom_site.label_alt_id 21 Cif _atom_site.label_comp_id 21 Cif _atom_site.label_asym_id 21 Cif _atom_site.label_entity_id 21 Cif _atom_site.label_seq_id 21 Cif _atom_site.pdbx_PDB_ins_code 21 Cif _atom_site.Cartn_x 21 Cif _atom_site.Cartn_y 21 Cif _atom_site.Cartn_z 21 Cif _atom_site.occupancy 21 Cif _atom_site.B_iso_or_equiv 21 Cif _atom_site.pdbx_formal_charge 21 Cif _atom_site.auth_seq_id 21 Cif _atom_site.auth_comp_id 21 Cif _atom_site.auth_asym_id 21 Cif _atom_site.auth_atom_id 21 Cif _atom_site.pdbx_PDB_model_num 22 Cif _pdbx_poly_seq_scheme LoopLength = 922 22 Cif _pdbx_poly_seq_scheme ListOfLines 22 Cif _pdbx_poly_seq_scheme.asym_id 22 Cif _pdbx_poly_seq_scheme.entity_id 22 Cif _pdbx_poly_seq_scheme.seq_id 22 Cif _pdbx_poly_seq_scheme.mon_id 22 Cif _pdbx_poly_seq_scheme.ndb_seq_num 22 Cif _pdbx_poly_seq_scheme.pdb_seq_num 22 Cif _pdbx_poly_seq_scheme.auth_seq_num 22 Cif _pdbx_poly_seq_scheme.pdb_mon_id 22 Cif _pdbx_poly_seq_scheme.auth_mon_id 22 Cif _pdbx_poly_seq_scheme.pdb_strand_id 22 Cif _pdbx_poly_seq_scheme.pdb_ins_code 22 Cif _pdbx_poly_seq_scheme.hetero 23 Cif _pdbx_struct_assembly LoopLength = 2 23 Cif _pdbx_struct_assembly ListOfLines 23 Cif _pdbx_struct_assembly.id 23 Cif _pdbx_struct_assembly.details 23 Cif _pdbx_struct_assembly.method_details 23 Cif _pdbx_struct_assembly.oligomeric_details 23 Cif _pdbx_struct_assembly.oligomeric_count 24 Cif _pdbx_struct_assembly_gen LoopLength = 2 24 Cif _pdbx_struct_assembly_gen ListOfLines 24 Cif _pdbx_struct_assembly_gen.assembly_id 24 Cif _pdbx_struct_assembly_gen.oper_expression 24 Cif _pdbx_struct_assembly_gen.asym_id_list 25 Cif _pdbx_struct_conn_angle LoopLength = 16 25 Cif _pdbx_struct_conn_angle ListOfLines 25 Cif _pdbx_struct_conn_angle.id 25 Cif _pdbx_struct_conn_angle.ptnr1_label_atom_id 25 Cif _pdbx_struct_conn_angle.ptnr1_label_alt_id 25 Cif _pdbx_struct_conn_angle.ptnr1_label_asym_id 25 Cif _pdbx_struct_conn_angle.ptnr1_label_comp_id 25 Cif _pdbx_struct_conn_angle.ptnr1_label_seq_id 25 Cif _pdbx_struct_conn_angle.ptnr1_auth_atom_id 25 Cif _pdbx_struct_conn_angle.ptnr1_auth_asym_id 25 Cif _pdbx_struct_conn_angle.ptnr1_auth_comp_id 25 Cif _pdbx_struct_conn_angle.ptnr1_auth_seq_id 25 Cif _pdbx_struct_conn_angle.ptnr1_PDB_ins_code 25 Cif _pdbx_struct_conn_angle.ptnr1_symmetry 25 Cif _pdbx_struct_conn_angle.ptnr2_label_atom_id 25 Cif _pdbx_struct_conn_angle.ptnr2_label_alt_id 25 Cif _pdbx_struct_conn_angle.ptnr2_label_asym_id 25 Cif _pdbx_struct_conn_angle.ptnr2_label_comp_id 25 Cif _pdbx_struct_conn_angle.ptnr2_label_seq_id 25 Cif _pdbx_struct_conn_angle.ptnr2_auth_atom_id 25 Cif _pdbx_struct_conn_angle.ptnr2_auth_asym_id 25 Cif _pdbx_struct_conn_angle.ptnr2_auth_comp_id 25 Cif _pdbx_struct_conn_angle.ptnr2_auth_seq_id 25 Cif _pdbx_struct_conn_angle.ptnr2_PDB_ins_code 25 Cif _pdbx_struct_conn_angle.ptnr2_symmetry 25 Cif _pdbx_struct_conn_angle.ptnr3_label_atom_id 25 Cif _pdbx_struct_conn_angle.ptnr3_label_alt_id 25 Cif _pdbx_struct_conn_angle.ptnr3_label_asym_id 25 Cif _pdbx_struct_conn_angle.ptnr3_label_comp_id 25 Cif _pdbx_struct_conn_angle.ptnr3_label_seq_id 25 Cif _pdbx_struct_conn_angle.ptnr3_auth_atom_id 25 Cif _pdbx_struct_conn_angle.ptnr3_auth_asym_id 25 Cif _pdbx_struct_conn_angle.ptnr3_auth_comp_id 25 Cif _pdbx_struct_conn_angle.ptnr3_auth_seq_id 25 Cif _pdbx_struct_conn_angle.ptnr3_PDB_ins_code 25 Cif _pdbx_struct_conn_angle.ptnr3_symmetry 25 Cif _pdbx_struct_conn_angle.value 25 Cif _pdbx_struct_conn_angle.value_esd 26 Cif _pdbx_audit_revision_history LoopLength = 3 26 Cif _pdbx_audit_revision_history ListOfLines 26 Cif _pdbx_audit_revision_history.ordinal 26 Cif _pdbx_audit_revision_history.data_content_type 26 Cif _pdbx_audit_revision_history.major_revision 26 Cif _pdbx_audit_revision_history.minor_revision 26 Cif _pdbx_audit_revision_history.revision_date 27 Cif _pdbx_audit_revision_group LoopLength = 2 27 Cif _pdbx_audit_revision_group ListOfLines 27 Cif _pdbx_audit_revision_group.ordinal 27 Cif _pdbx_audit_revision_group.revision_ordinal 27 Cif _pdbx_audit_revision_group.data_content_type 27 Cif _pdbx_audit_revision_group.group 28 Cif _software LoopLength = 5 28 Cif _software ListOfLines 28 Cif _software.name 28 Cif _software.classification 28 Cif _software.version 28 Cif _software.citation_id 28 Cif _software.pdbx_ordinal 29 Cif _pdbx_validate_close_contact LoopLength = 2 29 Cif _pdbx_validate_close_contact ListOfLines 29 Cif _pdbx_validate_close_contact.id 29 Cif _pdbx_validate_close_contact.PDB_model_num 29 Cif _pdbx_validate_close_contact.auth_atom_id_1 29 Cif _pdbx_validate_close_contact.auth_asym_id_1 29 Cif _pdbx_validate_close_contact.auth_comp_id_1 29 Cif _pdbx_validate_close_contact.auth_seq_id_1 29 Cif _pdbx_validate_close_contact.PDB_ins_code_1 29 Cif _pdbx_validate_close_contact.label_alt_id_1 29 Cif _pdbx_validate_close_contact.auth_atom_id_2 29 Cif _pdbx_validate_close_contact.auth_asym_id_2 29 Cif _pdbx_validate_close_contact.auth_comp_id_2 29 Cif _pdbx_validate_close_contact.auth_seq_id_2 29 Cif _pdbx_validate_close_contact.PDB_ins_code_2 29 Cif _pdbx_validate_close_contact.label_alt_id_2 29 Cif _pdbx_validate_close_contact.dist 30 Cif _pdbx_validate_rmsd_bond LoopLength = 2 30 Cif _pdbx_validate_rmsd_bond ListOfLines 30 Cif _pdbx_validate_rmsd_bond.id 30 Cif _pdbx_validate_rmsd_bond.PDB_model_num 30 Cif _pdbx_validate_rmsd_bond.auth_atom_id_1 30 Cif _pdbx_validate_rmsd_bond.auth_asym_id_1 30 Cif _pdbx_validate_rmsd_bond.auth_comp_id_1 30 Cif _pdbx_validate_rmsd_bond.auth_seq_id_1 30 Cif _pdbx_validate_rmsd_bond.PDB_ins_code_1 30 Cif _pdbx_validate_rmsd_bond.label_alt_id_1 30 Cif _pdbx_validate_rmsd_bond.auth_atom_id_2 30 Cif _pdbx_validate_rmsd_bond.auth_asym_id_2 30 Cif _pdbx_validate_rmsd_bond.auth_comp_id_2 30 Cif _pdbx_validate_rmsd_bond.auth_seq_id_2 30 Cif _pdbx_validate_rmsd_bond.PDB_ins_code_2 30 Cif _pdbx_validate_rmsd_bond.label_alt_id_2 30 Cif _pdbx_validate_rmsd_bond.bond_value 30 Cif _pdbx_validate_rmsd_bond.bond_target_value 30 Cif _pdbx_validate_rmsd_bond.bond_deviation 30 Cif _pdbx_validate_rmsd_bond.bond_standard_deviation 30 Cif _pdbx_validate_rmsd_bond.linker_flag 31 Cif _pdbx_validate_rmsd_angle LoopLength = 18 31 Cif _pdbx_validate_rmsd_angle ListOfLines 31 Cif _pdbx_validate_rmsd_angle.id 31 Cif _pdbx_validate_rmsd_angle.PDB_model_num 31 Cif _pdbx_validate_rmsd_angle.auth_atom_id_1 31 Cif _pdbx_validate_rmsd_angle.auth_asym_id_1 31 Cif _pdbx_validate_rmsd_angle.auth_comp_id_1 31 Cif _pdbx_validate_rmsd_angle.auth_seq_id_1 31 Cif _pdbx_validate_rmsd_angle.PDB_ins_code_1 31 Cif _pdbx_validate_rmsd_angle.label_alt_id_1 31 Cif _pdbx_validate_rmsd_angle.auth_atom_id_2 31 Cif _pdbx_validate_rmsd_angle.auth_asym_id_2 31 Cif _pdbx_validate_rmsd_angle.auth_comp_id_2 31 Cif _pdbx_validate_rmsd_angle.auth_seq_id_2 31 Cif _pdbx_validate_rmsd_angle.PDB_ins_code_2 31 Cif _pdbx_validate_rmsd_angle.label_alt_id_2 31 Cif _pdbx_validate_rmsd_angle.auth_atom_id_3 31 Cif _pdbx_validate_rmsd_angle.auth_asym_id_3 31 Cif _pdbx_validate_rmsd_angle.auth_comp_id_3 31 Cif _pdbx_validate_rmsd_angle.auth_seq_id_3 31 Cif _pdbx_validate_rmsd_angle.PDB_ins_code_3 31 Cif _pdbx_validate_rmsd_angle.label_alt_id_3 31 Cif _pdbx_validate_rmsd_angle.angle_value 31 Cif _pdbx_validate_rmsd_angle.angle_target_value 31 Cif _pdbx_validate_rmsd_angle.angle_deviation 31 Cif _pdbx_validate_rmsd_angle.angle_standard_deviation 31 Cif _pdbx_validate_rmsd_angle.linker_flag 32 Cif _pdbx_validate_torsion LoopLength = 32 32 Cif _pdbx_validate_torsion ListOfLines 32 Cif _pdbx_validate_torsion.id 32 Cif _pdbx_validate_torsion.PDB_model_num 32 Cif _pdbx_validate_torsion.auth_comp_id 32 Cif _pdbx_validate_torsion.auth_asym_id 32 Cif _pdbx_validate_torsion.auth_seq_id 32 Cif _pdbx_validate_torsion.PDB_ins_code 32 Cif _pdbx_validate_torsion.label_alt_id 32 Cif _pdbx_validate_torsion.phi 32 Cif _pdbx_validate_torsion.psi 33 Cif _pdbx_unobs_or_zero_occ_atoms LoopLength = 360 33 Cif _pdbx_unobs_or_zero_occ_atoms ListOfLines 33 Cif _pdbx_unobs_or_zero_occ_atoms.id 33 Cif _pdbx_unobs_or_zero_occ_atoms.PDB_model_num 33 Cif _pdbx_unobs_or_zero_occ_atoms.polymer_flag 33 Cif _pdbx_unobs_or_zero_occ_atoms.occupancy_flag 33 Cif _pdbx_unobs_or_zero_occ_atoms.auth_asym_id 33 Cif _pdbx_unobs_or_zero_occ_atoms.auth_comp_id 33 Cif _pdbx_unobs_or_zero_occ_atoms.auth_seq_id 33 Cif _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code 33 Cif _pdbx_unobs_or_zero_occ_atoms.auth_atom_id 33 Cif _pdbx_unobs_or_zero_occ_atoms.label_alt_id 33 Cif _pdbx_unobs_or_zero_occ_atoms.label_asym_id 33 Cif _pdbx_unobs_or_zero_occ_atoms.label_comp_id 33 Cif _pdbx_unobs_or_zero_occ_atoms.label_seq_id 33 Cif _pdbx_unobs_or_zero_occ_atoms.label_atom_id 34 Cif _pdbx_unobs_or_zero_occ_residues LoopLength = 161 34 Cif _pdbx_unobs_or_zero_occ_residues ListOfLines 34 Cif _pdbx_unobs_or_zero_occ_residues.id 34 Cif _pdbx_unobs_or_zero_occ_residues.PDB_model_num 34 Cif _pdbx_unobs_or_zero_occ_residues.polymer_flag 34 Cif _pdbx_unobs_or_zero_occ_residues.occupancy_flag 34 Cif _pdbx_unobs_or_zero_occ_residues.auth_asym_id 34 Cif _pdbx_unobs_or_zero_occ_residues.auth_comp_id 34 Cif _pdbx_unobs_or_zero_occ_residues.auth_seq_id 34 Cif _pdbx_unobs_or_zero_occ_residues.PDB_ins_code 34 Cif _pdbx_unobs_or_zero_occ_residues.label_asym_id 34 Cif _pdbx_unobs_or_zero_occ_residues.label_comp_id 34 Cif _pdbx_unobs_or_zero_occ_residues.label_seq_id 35 Cif _pdbx_entity_nonpoly LoopLength = 3 35 Cif _pdbx_entity_nonpoly ListOfLines 35 Cif _pdbx_entity_nonpoly.entity_id 35 Cif _pdbx_entity_nonpoly.name 35 Cif _pdbx_entity_nonpoly.comp_id 36 Cif _pdbx_nonpoly_scheme LoopLength = 75 36 Cif _pdbx_nonpoly_scheme ListOfLines 36 Cif _pdbx_nonpoly_scheme.asym_id 36 Cif _pdbx_nonpoly_scheme.entity_id 36 Cif _pdbx_nonpoly_scheme.mon_id 36 Cif _pdbx_nonpoly_scheme.ndb_seq_num 36 Cif _pdbx_nonpoly_scheme.pdb_seq_num 36 Cif _pdbx_nonpoly_scheme.auth_seq_num 36 Cif _pdbx_nonpoly_scheme.pdb_mon_id 36 Cif _pdbx_nonpoly_scheme.auth_mon_id 36 Cif _pdbx_nonpoly_scheme.pdb_strand_id 36 Cif _pdbx_nonpoly_scheme.pdb_ins_code
store/synthetases/1LI7.cif Crystal Structure of Cysteinyl-tRNA Synthetase with Cysteine Substrate Bound About organisms entity 1 gene_src_taxid 562 gene_src_Name Escherichia coli pdbx_org_TaxId 562 pdbx_org_Name Escherichia coli entity 1 gene_host_taxid 562 gene_host_Name Escherichia coli pdbx_org_TaxId 562 pdbx_org_Name Escherichia coli LabAsym AutAsym Entity A A 1 polymer man CYSTEINYL-TRNA B B 1 polymer man CYSTEINYL-TRNA C A 2 non-polymer syn ZINC D A 3 non-polymer syn CYSTEINE E B 2 non-polymer syn ZINC F B 3 non-polymer syn CYSTEINE G A 4 water nat water H B 4 water nat water ValuesOf SimpleKeys _entry.id 1LI7 _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.281 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 1LI5 _pdbx_database_related.details Unliganded Structure of CysRS _pdbx_database_related.content_type unspecified _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1LI7 _pdbx_database_status.recvd_initial_deposition_date 2002-04-17 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry N _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _cell.entry_id 1LI7 _cell.length_a 118.980 _cell.length_b 118.980 _cell.length_c 143.840 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? _symmetry.entry_id 1LI7 _symmetry.space_group_name_H-M P 41 21 2 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting tetragonal _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _entity_name_com.entity_id 1 _entity_name_com.name Cysteine--tRNA ligase; CysRS; transfer RNA-Cys synthetase _entity_name_sys.entity_id 1 _entity_name_sys.name E.C.6.1.1.16 _entity_poly.entity_id 1 _entity_poly.type polypeptide(L) _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code MLKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKLKYVRNITDIDDKIIKRANE NGESFVAMVDRMIAEMHKDFDALNILRPDMEPRATHHIAEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDL DQLQAGARVDVVDDKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIA QSTCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQLNYSEENLKQARAALERLY TALRGTDKTVAPAGGEAFEARFIEAMDDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEA FLQSGAQADDSEVAEIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQGTTWRRK _entity_poly.pdbx_seq_one_letter_code_can MLKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKLKYVRNITDIDDKIIKRANE NGESFVAMVDRMIAEMHKDFDALNILRPDMEPRATHHIAEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDL DQLQAGARVDVVDDKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIA QSTCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQLNYSEENLKQARAALERLY TALRGTDKTVAPAGGEAFEARFIEAMDDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEA FLQSGAQADDSEVAEIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQGTTWRRK _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Escherichia _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name Escherichia coli _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 562 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name Escherichia coli _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? _struct_ref.id 1 _struct_ref.entity_id 1 _struct_ref.db_name UNP _struct_ref.pdbx_db_accession P21888 _struct_ref.db_code SYC_ECOLI _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_seq_one_letter_code MLKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKLKYVRNITDIDDKIIKRANE NGESFVAMVDRMIAEMHKDFDALNILRPDMEPRATHHIAEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDL DQLQAGARVDVVDDKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIA QSTCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQLNYSEENLKQARAALERLY TALRGTDKTVAPAGGEAFEARFIEAMDDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEA FLQSGAQADDSEVAEIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQGTTWRRK _struct_ref.pdbx_db_isoform ? _exptl.entry_id 1LI7 _exptl.method X-RAY DIFFRACTION _exptl.crystals_number 1 _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.43 _exptl_crystal.density_percent_sol 47 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method VAPOR DIFFUSION, HANGING DROP _exptl_crystal_grow.temp 290 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_details 16% PEG 8000, 200 MM magnesium acetate, 1MM DTT, cacodylate, 5MM ATP, 10MM cysteine. 100 MM BUFFER, pH 6.5, VAPOR DIFFUSION, HANGING DROP at 290K _exptl_crystal_grow.pdbx_pH_range . _diffrn.id 1 _diffrn.ambient_temp 100.0 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type CUSTOM-MADE _diffrn_detector.pdbx_collection_date 2001-09-06 _diffrn_detector.details ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator DOUBLE CRYSTAL MONOCHROMATOR _diffrn_radiation.pdbx_diffrn_protocol SINGLE WAVELENGTH _diffrn_radiation.pdbx_scattering_type x-ray _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9800 _diffrn_radiation_wavelength.wt 1.0 _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type NSLS BEAMLINE X12C _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X12C _diffrn_source.pdbx_wavelength 0.9800 _diffrn_source.pdbx_wavelength_list 0.9800 _reflns.entry_id 1LI7 _reflns.observed_criterion_sigma_I 0.000 _reflns.observed_criterion_sigma_F 0.000 _reflns.d_resolution_low 55.00 _reflns.d_resolution_high 2.600 _reflns.number_obs 32373 _reflns.number_all 32383 _reflns.percent_possible_obs 100.0 _reflns.pdbx_Rmerge_I_obs 0.091 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 15.6 _reflns.B_iso_Wilson_estimate 41.6 _reflns.pdbx_redundancy 8.000 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns_shell.d_res_high 2.60 _reflns_shell.d_res_low 2.74 _reflns_shell.percent_possible_all 100.0 _reflns_shell.Rmerge_I_obs 0.52 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 4.10 _reflns_shell.pdbx_redundancy 8.1 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 4634 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 _refine.entry_id 1LI7 _refine.ls_number_reflns_obs 32373 _refine.ls_number_reflns_all 32383 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF 2482879.95 _refine.pdbx_data_cutoff_low_absF 0.000000 _refine.ls_d_res_low 19.95 _refine.ls_d_res_high 2.60 _refine.ls_percent_reflns_obs 99.9 _refine.ls_R_factor_obs 0.251 _refine.ls_R_factor_all 0.251 _refine.ls_R_factor_R_work 0.25 _refine.ls_R_factor_R_free 0.29 _refine.ls_R_factor_R_free_error 0.005 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 10.0 _refine.ls_number_reflns_R_free 3231 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 40.2 _refine.solvent_model_details FLAT MODEL _refine.solvent_model_param_ksol 0.317251 _refine.solvent_model_param_bsol 30.4565 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model PDB ENTRY 1LI5 _refine.pdbx_method_to_determine_struct FOURIER SYNTHESIS _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values Engh & Huber _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id X-RAY DIFFRACTION _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine_analyze.entry_id 1LI7 _refine_analyze.Luzzati_coordinate_error_obs 0.37 _refine_analyze.Luzzati_sigma_a_obs 0.38 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.45 _refine_analyze.Luzzati_sigma_a_free 0.44 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id X-RAY DIFFRACTION _refine_hist.pdbx_refine_id X-RAY DIFFRACTION _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 5740 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 16 _refine_hist.number_atoms_solvent 71 _refine_hist.number_atoms_total 5827 _refine_hist.d_res_high 2.60 _refine_hist.d_res_low 19.95 _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 2.60 _refine_ls_shell.d_res_low 2.76 _refine_ls_shell.number_reflns_R_work 4738 _refine_ls_shell.R_factor_R_work 0.32 _refine_ls_shell.percent_reflns_obs 100.0 _refine_ls_shell.R_factor_R_free 0.362 _refine_ls_shell.R_factor_R_free_error 0.016 _refine_ls_shell.percent_reflns_R_free 10.2 _refine_ls_shell.number_reflns_R_free 537 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.pdbx_refine_id X-RAY DIFFRACTION _struct.entry_id 1LI7 _struct.title Crystal Structure of Cysteinyl-tRNA Synthetase with Cysteine Substrate Bound _struct.pdbx_descriptor CYSTEINYL-TRNA SYNTHETASE (E.C.6.1.1.16) _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? _struct_keywords.entry_id 1LI7 _struct_keywords.pdbx_keywords LIGASE _struct_keywords.text TRNA SYNTHETASE, CYSTEINE, E.COLI, LIGASE _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? _database_PDB_matrix.entry_id 1LI7 _atom_sites.entry_id 1LI7 _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type identity operation _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type Structure model _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type Initial release _pdbx_audit_revision_details.description ? _pdbx_validate_main_chain_plane.id 1 _pdbx_validate_main_chain_plane.PDB_model_num 1 _pdbx_validate_main_chain_plane.auth_comp_id MET _pdbx_validate_main_chain_plane.auth_asym_id B _pdbx_validate_main_chain_plane.auth_seq_id 88 _pdbx_validate_main_chain_plane.PDB_ins_code ? _pdbx_validate_main_chain_plane.label_alt_id ? _pdbx_validate_main_chain_plane.improper_torsion_angle 10.28

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