Crystallographic Information File browser    Powered by zincr within Tanzer
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      This Crystallographic Information File browser gives acces to the content of the Cif file
      Data are stored in two ways, SimpleKey - value, or LoopKeys whith lists of values.
      
      First select a Cif file
            give a CifEntry (ie 1qru) it will be dowloaded from  https://files.rcsb.org/download/1qru.cif"
         or get existing files from the server
         or upload a cif file from your computer
      
      Some relevant data are automatically displayed on the main page
      In the left part of the page click on a GlobalKey, a SimpleKey or a LoopKey with subkey 

      Get help about available Cif functions with Cif Help, CifAsym Help, CifEntity Help, etc
      All these functions can be called in command line mode
          or from any other program querying gscope directly
          or through the CafeDesScience (qds Zero Cif Help)
          or as webservice (see Cif Help)
          

      See the 3d structure with the Ngl button
      
      Raymond
      
To get a Cif file :    Give a cif entry    or    Get a file from the server Get a file from the server and press    or    Upload your file Upload your file : first then select the server directory and ... current Cif store/synthetases/2G36.cif


see global keys
Cif Help Cif File Value Cif Text Cif ValuesOf SimpleKeys Cif ListOf Key Cif ListOf SimpleKey Cif ListOf SimpleKeyClass Cif ListOf LoopKey Cif ListOf LoopKeyClass Cif AsymAndEntities Cif _entity ListOfLines CifEntity CifEntity Help CifEntity 2 _entity pdbx_description CifEntity 2 Sequence CifEx Help CifAsym Help CifAsym ListOf LabelAuth CifAsym ListOf Label CifAsym L Auth CifAsym A Label CifAsym Auth_A _entity.id
see simple Cif keys
Cif _entry.id Cif _audit_conform.dict_name Cif _audit_conform.dict_version Cif _audit_conform.dict_location Cif _pdbx_database_related.db_name Cif _pdbx_database_related.db_id Cif _pdbx_database_related.details Cif _pdbx_database_related.content_type Cif _pdbx_database_status.SG_entry Cif _pdbx_database_status.entry_id Cif _pdbx_database_status.deposit_site Cif _pdbx_database_status.process_site Cif _pdbx_database_status.recvd_initial_deposition_date Cif _pdbx_database_status.status_code Cif _pdbx_database_status.status_code_sf Cif _pdbx_database_status.status_code_mr Cif _pdbx_database_status.status_code_cs Cif _pdbx_database_status.pdb_format_compatible Cif _pdbx_database_status.methods_development_category Cif _pdbx_database_status.status_code_nmr_data Cif _audit_author.name Cif _audit_author.pdbx_ordinal Cif _citation.id Cif _citation.title Cif _citation.journal_abbrev Cif _citation.journal_volume Cif _citation.page_first Cif _citation.page_last Cif _citation.year Cif _citation.journal_id_ASTM Cif _citation.country Cif _citation.journal_id_ISSN Cif _citation.journal_id_CSD Cif _citation.book_publisher Cif _citation.pdbx_database_id_PubMed Cif _citation.pdbx_database_id_DOI Cif _cell.entry_id Cif _cell.length_a Cif _cell.length_b Cif _cell.length_c Cif _cell.angle_alpha Cif _cell.angle_beta Cif _cell.angle_gamma Cif _cell.pdbx_unique_axis Cif _cell.Z_PDB Cif _cell.length_a_esd Cif _cell.length_b_esd Cif _cell.length_c_esd Cif _cell.angle_alpha_esd Cif _cell.angle_beta_esd Cif _cell.angle_gamma_esd Cif _symmetry.Int_Tables_number Cif _symmetry.space_group_name_H-M Cif _symmetry.entry_id Cif _symmetry.pdbx_full_space_group_name_H-M Cif _symmetry.cell_setting Cif _symmetry.space_group_name_Hall Cif _entity_name_com.entity_id Cif _entity_name_com.name Cif _entity_poly.entity_id Cif _entity_poly.type Cif _entity_poly.nstd_linkage Cif _entity_poly.nstd_monomer Cif _entity_poly.pdbx_seq_one_letter_code Cif _entity_poly.pdbx_seq_one_letter_code_can Cif _entity_poly.pdbx_strand_id Cif _entity_poly.pdbx_target_identifier Cif _entity_src_gen.entity_id Cif _entity_src_gen.pdbx_src_id Cif _entity_src_gen.pdbx_alt_source_flag Cif _entity_src_gen.pdbx_seq_type Cif _entity_src_gen.pdbx_beg_seq_num Cif _entity_src_gen.pdbx_end_seq_num Cif _entity_src_gen.gene_src_common_name Cif _entity_src_gen.gene_src_genus Cif _entity_src_gen.pdbx_gene_src_gene Cif _entity_src_gen.gene_src_species Cif _entity_src_gen.gene_src_strain Cif _entity_src_gen.gene_src_tissue Cif _entity_src_gen.gene_src_tissue_fraction Cif _entity_src_gen.gene_src_details Cif _entity_src_gen.pdbx_gene_src_fragment Cif _entity_src_gen.pdbx_gene_src_scientific_name Cif _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id Cif _entity_src_gen.pdbx_gene_src_variant Cif _entity_src_gen.pdbx_gene_src_cell_line Cif _entity_src_gen.pdbx_gene_src_atcc Cif _entity_src_gen.pdbx_gene_src_organ Cif _entity_src_gen.pdbx_gene_src_organelle Cif _entity_src_gen.pdbx_gene_src_cell Cif _entity_src_gen.pdbx_gene_src_cellular_location Cif _entity_src_gen.host_org_common_name Cif _entity_src_gen.pdbx_host_org_scientific_name Cif _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id Cif _entity_src_gen.host_org_genus Cif _entity_src_gen.pdbx_host_org_gene Cif _entity_src_gen.pdbx_host_org_organ Cif _entity_src_gen.host_org_species Cif _entity_src_gen.pdbx_host_org_tissue Cif _entity_src_gen.pdbx_host_org_tissue_fraction Cif _entity_src_gen.pdbx_host_org_strain Cif _entity_src_gen.pdbx_host_org_variant Cif _entity_src_gen.pdbx_host_org_cell_line Cif _entity_src_gen.pdbx_host_org_atcc Cif _entity_src_gen.pdbx_host_org_culture_collection Cif _entity_src_gen.pdbx_host_org_cell Cif _entity_src_gen.pdbx_host_org_organelle Cif _entity_src_gen.pdbx_host_org_cellular_location Cif _entity_src_gen.pdbx_host_org_vector_type Cif _entity_src_gen.pdbx_host_org_vector Cif _entity_src_gen.host_org_details Cif _entity_src_gen.expression_system_id Cif _entity_src_gen.plasmid_name Cif _entity_src_gen.plasmid_details Cif _entity_src_gen.pdbx_description Cif _struct_ref.id Cif _struct_ref.db_name Cif _struct_ref.db_code Cif _struct_ref.pdbx_db_accession Cif _struct_ref.entity_id Cif _struct_ref.pdbx_seq_one_letter_code Cif _struct_ref.pdbx_align_begin Cif _struct_ref.pdbx_db_isoform Cif _struct_ref_seq.align_id Cif _struct_ref_seq.ref_id Cif _struct_ref_seq.pdbx_PDB_id_code Cif _struct_ref_seq.pdbx_strand_id Cif _struct_ref_seq.seq_align_beg Cif _struct_ref_seq.pdbx_seq_align_beg_ins_code Cif _struct_ref_seq.seq_align_end Cif _struct_ref_seq.pdbx_seq_align_end_ins_code Cif _struct_ref_seq.pdbx_db_accession Cif _struct_ref_seq.db_align_beg Cif _struct_ref_seq.pdbx_db_align_beg_ins_code Cif _struct_ref_seq.db_align_end Cif _struct_ref_seq.pdbx_db_align_end_ins_code Cif _struct_ref_seq.pdbx_auth_seq_align_beg Cif _struct_ref_seq.pdbx_auth_seq_align_end Cif _exptl.crystals_number Cif _exptl.method Cif _exptl.entry_id Cif _exptl_crystal.id Cif _exptl_crystal.density_percent_sol Cif _exptl_crystal.density_Matthews Cif _exptl_crystal.description Cif _exptl_crystal.density_meas Cif _exptl_crystal.F_000 Cif _exptl_crystal.preparation Cif _exptl_crystal_grow.crystal_id Cif _exptl_crystal_grow.method Cif _exptl_crystal_grow.pH Cif _exptl_crystal_grow.temp Cif _exptl_crystal_grow.pdbx_details Cif _exptl_crystal_grow.temp_details Cif _exptl_crystal_grow.pdbx_pH_range Cif _diffrn.id Cif _diffrn.ambient_temp Cif _diffrn.ambient_temp_details Cif _diffrn.crystal_id Cif _diffrn_detector.diffrn_id Cif _diffrn_detector.detector Cif _diffrn_detector.type Cif _diffrn_detector.details Cif _diffrn_detector.pdbx_collection_date Cif _diffrn_radiation.diffrn_id Cif _diffrn_radiation.pdbx_monochromatic_or_laue_m_l Cif _diffrn_radiation.monochromator Cif _diffrn_radiation.pdbx_diffrn_protocol Cif _diffrn_radiation.wavelength_id Cif _diffrn_radiation.pdbx_scattering_type Cif _diffrn_radiation_wavelength.id Cif _diffrn_radiation_wavelength.wavelength Cif _diffrn_radiation_wavelength.wt Cif _diffrn_source.diffrn_id Cif _diffrn_source.source Cif _diffrn_source.pdbx_synchrotron_beamline Cif _diffrn_source.type Cif _diffrn_source.pdbx_wavelength Cif _diffrn_source.pdbx_wavelength_list Cif _diffrn_source.pdbx_synchrotron_site Cif _reflns.entry_id Cif _reflns.d_resolution_high Cif _reflns.number_obs Cif _reflns.pdbx_Rmerge_I_obs Cif _reflns.pdbx_netI_over_sigmaI Cif _reflns.percent_possible_obs Cif _reflns.B_iso_Wilson_estimate Cif _reflns.observed_criterion_sigma_F Cif _reflns.observed_criterion_sigma_I Cif _reflns.d_resolution_low Cif _reflns.number_all Cif _reflns.pdbx_Rsym_value Cif _reflns.pdbx_redundancy Cif _reflns.R_free_details Cif _reflns.limit_h_max Cif _reflns.limit_h_min Cif _reflns.limit_k_max Cif _reflns.limit_k_min Cif _reflns.limit_l_max Cif _reflns.limit_l_min Cif _reflns.observed_criterion_F_max Cif _reflns.observed_criterion_F_min Cif _reflns.pdbx_chi_squared Cif _reflns.pdbx_scaling_rejects Cif _reflns.pdbx_ordinal Cif _reflns.pdbx_diffrn_id Cif _refine.ls_d_res_high Cif _refine.ls_d_res_low Cif _refine.pdbx_ls_sigma_F Cif _refine.ls_percent_reflns_obs Cif _refine.ls_number_reflns_obs Cif _refine.pdbx_ls_cross_valid_method Cif _refine.pdbx_R_Free_selection_details Cif _refine.details Cif _refine.ls_R_factor_all Cif _refine.ls_R_factor_R_work Cif _refine.ls_R_factor_R_free Cif _refine.ls_percent_reflns_R_free Cif _refine.ls_number_reflns_R_free Cif _refine.B_iso_mean Cif _refine.correlation_coeff_Fo_to_Fc Cif _refine.correlation_coeff_Fo_to_Fc_free Cif _refine.pdbx_overall_ESU_R Cif _refine.pdbx_overall_ESU_R_Free Cif _refine.overall_SU_ML Cif _refine.overall_SU_B Cif _refine.solvent_model_details Cif _refine.pdbx_solvent_vdw_probe_radii Cif _refine.pdbx_solvent_ion_probe_radii Cif _refine.pdbx_solvent_shrinkage_radii Cif _refine.pdbx_method_to_determine_struct Cif _refine.pdbx_stereochemistry_target_values Cif _refine.pdbx_starting_model Cif _refine.entry_id Cif _refine.pdbx_ls_sigma_I Cif _refine.ls_number_reflns_all Cif _refine.ls_R_factor_obs Cif _refine.ls_redundancy_reflns_obs Cif _refine.pdbx_data_cutoff_high_absF Cif _refine.pdbx_data_cutoff_low_absF Cif _refine.ls_number_parameters Cif _refine.ls_number_restraints Cif _refine.ls_R_factor_R_free_error Cif _refine.ls_R_factor_R_free_error_details Cif _refine.pdbx_stereochem_target_val_spec_case Cif _refine.solvent_model_param_bsol Cif _refine.solvent_model_param_ksol Cif _refine.occupancy_max Cif _refine.occupancy_min Cif _refine.pdbx_isotropic_thermal_model Cif _refine.B_iso_min Cif _refine.B_iso_max Cif _refine.overall_SU_R_Cruickshank_DPI Cif _refine.overall_SU_R_free Cif _refine.pdbx_data_cutoff_high_rms_absF Cif _refine.ls_wR_factor_R_free Cif _refine.ls_wR_factor_R_work Cif _refine.overall_FOM_free_R_set Cif _refine.overall_FOM_work_R_set Cif _refine.pdbx_refine_id Cif _refine.pdbx_TLS_residual_ADP_flag Cif _refine.pdbx_diffrn_id Cif _refine.pdbx_overall_phase_error Cif _refine.pdbx_overall_SU_R_free_Cruickshank_DPI Cif _refine.pdbx_overall_SU_R_Blow_DPI Cif _refine.pdbx_overall_SU_R_free_Blow_DPI Cif _refine_hist.pdbx_refine_id Cif _refine_hist.cycle_id Cif _refine_hist.pdbx_number_atoms_protein Cif _refine_hist.pdbx_number_atoms_nucleic_acid Cif _refine_hist.pdbx_number_atoms_ligand Cif _refine_hist.number_atoms_solvent Cif _refine_hist.number_atoms_total Cif _refine_hist.d_res_high Cif _refine_hist.d_res_low Cif _refine_ls_shell.d_res_high Cif _refine_ls_shell.d_res_low Cif _refine_ls_shell.pdbx_total_number_of_bins_used Cif _refine_ls_shell.percent_reflns_obs Cif _refine_ls_shell.number_reflns_R_work Cif _refine_ls_shell.R_factor_all Cif _refine_ls_shell.R_factor_R_work Cif _refine_ls_shell.R_factor_R_free Cif _refine_ls_shell.percent_reflns_R_free Cif _refine_ls_shell.number_reflns_R_free Cif _refine_ls_shell.R_factor_R_free_error Cif _refine_ls_shell.number_reflns_all Cif _refine_ls_shell.number_reflns_obs Cif _refine_ls_shell.redundancy_reflns_obs Cif _refine_ls_shell.pdbx_refine_id Cif _struct.entry_id Cif _struct.title Cif _struct.pdbx_model_details Cif _struct.pdbx_CASP_flag Cif _struct.pdbx_model_type_details Cif _struct_keywords.text Cif _struct_keywords.pdbx_keywords Cif _struct_keywords.entry_id Cif _struct_biol.id Cif _struct_biol.details Cif _struct_biol.pdbx_parent_biol_id Cif _struct_conf_type.id Cif _struct_conf_type.criteria Cif _struct_conf_type.reference Cif _struct_conn_type.id Cif _struct_conn_type.criteria Cif _struct_conn_type.reference Cif _atom_sites.entry_id Cif _pdbx_SG_project.project_name Cif _pdbx_SG_project.full_name_of_center Cif _pdbx_SG_project.id Cif _pdbx_SG_project.initial_of_center Cif _pdbx_struct_assembly.id Cif _pdbx_struct_assembly.details Cif _pdbx_struct_assembly.method_details Cif _pdbx_struct_assembly.oligomeric_details Cif _pdbx_struct_assembly.oligomeric_count Cif _pdbx_struct_assembly_gen.assembly_id Cif _pdbx_struct_assembly_gen.oper_expression Cif _pdbx_struct_assembly_gen.asym_id_list Cif _pdbx_audit_revision_details.ordinal Cif _pdbx_audit_revision_details.revision_ordinal Cif _pdbx_audit_revision_details.data_content_type Cif _pdbx_audit_revision_details.provider Cif _pdbx_audit_revision_details.type Cif _pdbx_audit_revision_details.description Cif _pdbx_audit_revision_details.details Cif _pdbx_refine_tls_group.refine_tls_id Cif _pdbx_refine_tls_group.beg_label_seq_id Cif _pdbx_refine_tls_group.end_label_seq_id Cif _pdbx_refine_tls_group.beg_auth_asym_id Cif _pdbx_refine_tls_group.end_auth_asym_id Cif _pdbx_refine_tls_group.pdbx_refine_id Cif _phasing.method Cif _pdbx_database_remark.id Cif _pdbx_database_remark.text Cif _pdbx_validate_close_contact.id Cif _pdbx_validate_close_contact.PDB_model_num Cif _pdbx_validate_close_contact.auth_atom_id_1 Cif _pdbx_validate_close_contact.auth_asym_id_1 Cif _pdbx_validate_close_contact.auth_comp_id_1 Cif _pdbx_validate_close_contact.auth_seq_id_1 Cif _pdbx_validate_close_contact.PDB_ins_code_1 Cif _pdbx_validate_close_contact.label_alt_id_1 Cif _pdbx_validate_close_contact.auth_atom_id_2 Cif _pdbx_validate_close_contact.auth_asym_id_2 Cif _pdbx_validate_close_contact.auth_comp_id_2 Cif _pdbx_validate_close_contact.auth_seq_id_2 Cif _pdbx_validate_close_contact.PDB_ins_code_2 Cif _pdbx_validate_close_contact.label_alt_id_2 Cif _pdbx_validate_close_contact.dist
see Loop Cif keys
0 Cif _database_2 LoopLength = 3 0 Cif _database_2 ListOfLines 0 Cif _database_2.database_id 0 Cif _database_2.database_code 0 Cif _database_2.pdbx_database_accession 0 Cif _database_2.pdbx_DOI 1 Cif _citation_author LoopLength = 44 1 Cif _citation_author ListOfLines 1 Cif _citation_author.citation_id 1 Cif _citation_author.name 1 Cif _citation_author.ordinal 1 Cif _citation_author.identifier_ORCID 2 Cif _entity LoopLength = 4 2 Cif _entity ListOfLines 2 Cif _entity.id 2 Cif _entity.type 2 Cif _entity.src_method 2 Cif _entity.pdbx_description 2 Cif _entity.formula_weight 2 Cif _entity.pdbx_number_of_molecules 2 Cif _entity.pdbx_ec 2 Cif _entity.pdbx_mutation 2 Cif _entity.pdbx_fragment 2 Cif _entity.details 3 Cif _entity_poly_seq LoopLength = 340 3 Cif _entity_poly_seq ListOfLines 3 Cif _entity_poly_seq.entity_id 3 Cif _entity_poly_seq.num 3 Cif _entity_poly_seq.mon_id 3 Cif _entity_poly_seq.hetero 4 Cif _struct_ref_seq_dif LoopLength = 12 4 Cif _struct_ref_seq_dif ListOfLines 4 Cif _struct_ref_seq_dif.align_id 4 Cif _struct_ref_seq_dif.pdbx_pdb_id_code 4 Cif _struct_ref_seq_dif.mon_id 4 Cif _struct_ref_seq_dif.pdbx_pdb_strand_id 4 Cif _struct_ref_seq_dif.seq_num 4 Cif _struct_ref_seq_dif.pdbx_pdb_ins_code 4 Cif _struct_ref_seq_dif.pdbx_seq_db_name 4 Cif _struct_ref_seq_dif.pdbx_seq_db_accession_code 4 Cif _struct_ref_seq_dif.db_mon_id 4 Cif _struct_ref_seq_dif.pdbx_seq_db_seq_num 4 Cif _struct_ref_seq_dif.details 4 Cif _struct_ref_seq_dif.pdbx_auth_seq_num 4 Cif _struct_ref_seq_dif.pdbx_ordinal 5 Cif _chem_comp LoopLength = 22 5 Cif _chem_comp ListOfLines 5 Cif _chem_comp.id 5 Cif _chem_comp.type 5 Cif _chem_comp.mon_nstd_flag 5 Cif _chem_comp.name 5 Cif _chem_comp.pdbx_synonyms 5 Cif _chem_comp.formula 5 Cif _chem_comp.formula_weight 6 Cif _reflns_shell LoopLength = 9 6 Cif _reflns_shell ListOfLines 6 Cif _reflns_shell.d_res_high 6 Cif _reflns_shell.d_res_low 6 Cif _reflns_shell.number_measured_obs 6 Cif _reflns_shell.number_measured_all 6 Cif _reflns_shell.number_unique_obs 6 Cif _reflns_shell.Rmerge_I_obs 6 Cif _reflns_shell.meanI_over_sigI_obs 6 Cif _reflns_shell.pdbx_Rsym_value 6 Cif _reflns_shell.pdbx_chi_squared 6 Cif _reflns_shell.pdbx_redundancy 6 Cif _reflns_shell.percent_possible_obs 6 Cif _reflns_shell.number_unique_all 6 Cif _reflns_shell.percent_possible_all 6 Cif _reflns_shell.pdbx_ordinal 6 Cif _reflns_shell.pdbx_diffrn_id 7 Cif _refine_ls_restr LoopLength = 24 7 Cif _refine_ls_restr ListOfLines 7 Cif _refine_ls_restr.type 7 Cif _refine_ls_restr.number 7 Cif _refine_ls_restr.dev_ideal 7 Cif _refine_ls_restr.dev_ideal_target 7 Cif _refine_ls_restr.weight 7 Cif _refine_ls_restr.pdbx_refine_id 7 Cif _refine_ls_restr.pdbx_restraint_function 8 Cif _struct_asym LoopLength = 4 8 Cif _struct_asym ListOfLines 8 Cif _struct_asym.id 8 Cif _struct_asym.pdbx_blank_PDB_chainid_flag 8 Cif _struct_asym.pdbx_modified 8 Cif _struct_asym.entity_id 8 Cif _struct_asym.details 9 Cif _struct_conf LoopLength = 19 9 Cif _struct_conf ListOfLines 9 Cif _struct_conf.conf_type_id 9 Cif _struct_conf.id 9 Cif _struct_conf.pdbx_PDB_helix_id 9 Cif _struct_conf.beg_label_comp_id 9 Cif _struct_conf.beg_label_asym_id 9 Cif _struct_conf.beg_label_seq_id 9 Cif _struct_conf.pdbx_beg_PDB_ins_code 9 Cif _struct_conf.end_label_comp_id 9 Cif _struct_conf.end_label_asym_id 9 Cif _struct_conf.end_label_seq_id 9 Cif _struct_conf.pdbx_end_PDB_ins_code 9 Cif _struct_conf.beg_auth_comp_id 9 Cif _struct_conf.beg_auth_asym_id 9 Cif _struct_conf.beg_auth_seq_id 9 Cif _struct_conf.end_auth_comp_id 9 Cif _struct_conf.end_auth_asym_id 9 Cif _struct_conf.end_auth_seq_id 9 Cif _struct_conf.pdbx_PDB_helix_class 9 Cif _struct_conf.details 9 Cif _struct_conf.pdbx_PDB_helix_length 10 Cif _struct_conn LoopLength = 4 10 Cif _struct_conn ListOfLines 10 Cif _struct_conn.id 10 Cif _struct_conn.conn_type_id 10 Cif _struct_conn.pdbx_leaving_atom_flag 10 Cif _struct_conn.pdbx_PDB_id 10 Cif _struct_conn.ptnr1_label_asym_id 10 Cif _struct_conn.ptnr1_label_comp_id 10 Cif _struct_conn.ptnr1_label_seq_id 10 Cif _struct_conn.ptnr1_label_atom_id 10 Cif _struct_conn.pdbx_ptnr1_label_alt_id 10 Cif _struct_conn.pdbx_ptnr1_PDB_ins_code 10 Cif _struct_conn.pdbx_ptnr1_standard_comp_id 10 Cif _struct_conn.ptnr1_symmetry 10 Cif _struct_conn.ptnr2_label_asym_id 10 Cif _struct_conn.ptnr2_label_comp_id 10 Cif _struct_conn.ptnr2_label_seq_id 10 Cif _struct_conn.ptnr2_label_atom_id 10 Cif _struct_conn.pdbx_ptnr2_label_alt_id 10 Cif _struct_conn.pdbx_ptnr2_PDB_ins_code 10 Cif _struct_conn.ptnr1_auth_asym_id 10 Cif _struct_conn.ptnr1_auth_comp_id 10 Cif _struct_conn.ptnr1_auth_seq_id 10 Cif _struct_conn.ptnr2_auth_asym_id 10 Cif _struct_conn.ptnr2_auth_comp_id 10 Cif _struct_conn.ptnr2_auth_seq_id 10 Cif _struct_conn.ptnr2_symmetry 10 Cif _struct_conn.pdbx_ptnr3_label_atom_id 10 Cif _struct_conn.pdbx_ptnr3_label_seq_id 10 Cif _struct_conn.pdbx_ptnr3_label_comp_id 10 Cif _struct_conn.pdbx_ptnr3_label_asym_id 10 Cif _struct_conn.pdbx_ptnr3_label_alt_id 10 Cif _struct_conn.pdbx_ptnr3_PDB_ins_code 10 Cif _struct_conn.details 10 Cif _struct_conn.pdbx_dist_value 10 Cif _struct_conn.pdbx_value_order 10 Cif _struct_conn.pdbx_role 11 Cif _struct_sheet LoopLength = 2 11 Cif _struct_sheet ListOfLines 11 Cif _struct_sheet.id 11 Cif _struct_sheet.type 11 Cif _struct_sheet.number_strands 11 Cif _struct_sheet.details 12 Cif _struct_sheet_order LoopLength = 3 12 Cif _struct_sheet_order ListOfLines 12 Cif _struct_sheet_order.sheet_id 12 Cif _struct_sheet_order.range_id_1 12 Cif _struct_sheet_order.range_id_2 12 Cif _struct_sheet_order.offset 12 Cif _struct_sheet_order.sense 13 Cif _struct_sheet_range LoopLength = 5 13 Cif _struct_sheet_range ListOfLines 13 Cif _struct_sheet_range.sheet_id 13 Cif _struct_sheet_range.id 13 Cif _struct_sheet_range.beg_label_comp_id 13 Cif _struct_sheet_range.beg_label_asym_id 13 Cif _struct_sheet_range.beg_label_seq_id 13 Cif _struct_sheet_range.pdbx_beg_PDB_ins_code 13 Cif _struct_sheet_range.end_label_comp_id 13 Cif _struct_sheet_range.end_label_asym_id 13 Cif _struct_sheet_range.end_label_seq_id 13 Cif _struct_sheet_range.pdbx_end_PDB_ins_code 13 Cif _struct_sheet_range.beg_auth_comp_id 13 Cif _struct_sheet_range.beg_auth_asym_id 13 Cif _struct_sheet_range.beg_auth_seq_id 13 Cif _struct_sheet_range.end_auth_comp_id 13 Cif _struct_sheet_range.end_auth_asym_id 13 Cif _struct_sheet_range.end_auth_seq_id 14 Cif _pdbx_struct_sheet_hbond LoopLength = 3 14 Cif _pdbx_struct_sheet_hbond ListOfLines 14 Cif _pdbx_struct_sheet_hbond.sheet_id 14 Cif _pdbx_struct_sheet_hbond.range_id_1 14 Cif _pdbx_struct_sheet_hbond.range_id_2 14 Cif _pdbx_struct_sheet_hbond.range_1_label_atom_id 14 Cif _pdbx_struct_sheet_hbond.range_1_label_comp_id 14 Cif _pdbx_struct_sheet_hbond.range_1_label_asym_id 14 Cif _pdbx_struct_sheet_hbond.range_1_label_seq_id 14 Cif _pdbx_struct_sheet_hbond.range_1_PDB_ins_code 14 Cif _pdbx_struct_sheet_hbond.range_1_auth_atom_id 14 Cif _pdbx_struct_sheet_hbond.range_1_auth_comp_id 14 Cif _pdbx_struct_sheet_hbond.range_1_auth_asym_id 14 Cif _pdbx_struct_sheet_hbond.range_1_auth_seq_id 14 Cif _pdbx_struct_sheet_hbond.range_2_label_atom_id 14 Cif _pdbx_struct_sheet_hbond.range_2_label_comp_id 14 Cif _pdbx_struct_sheet_hbond.range_2_label_asym_id 14 Cif _pdbx_struct_sheet_hbond.range_2_label_seq_id 14 Cif _pdbx_struct_sheet_hbond.range_2_PDB_ins_code 14 Cif _pdbx_struct_sheet_hbond.range_2_auth_atom_id 14 Cif _pdbx_struct_sheet_hbond.range_2_auth_comp_id 14 Cif _pdbx_struct_sheet_hbond.range_2_auth_asym_id 14 Cif _pdbx_struct_sheet_hbond.range_2_auth_seq_id 15 Cif _struct_site LoopLength = 2 15 Cif _struct_site ListOfLines 15 Cif _struct_site.id 15 Cif _struct_site.pdbx_evidence_code 15 Cif _struct_site.pdbx_auth_asym_id 15 Cif _struct_site.pdbx_auth_comp_id 15 Cif _struct_site.pdbx_auth_seq_id 15 Cif _struct_site.pdbx_auth_ins_code 15 Cif _struct_site.pdbx_num_residues 15 Cif _struct_site.details 16 Cif _struct_site_gen LoopLength = 20 16 Cif _struct_site_gen ListOfLines 16 Cif _struct_site_gen.id 16 Cif _struct_site_gen.site_id 16 Cif _struct_site_gen.pdbx_num_res 16 Cif _struct_site_gen.label_comp_id 16 Cif _struct_site_gen.label_asym_id 16 Cif _struct_site_gen.label_seq_id 16 Cif _struct_site_gen.pdbx_auth_ins_code 16 Cif _struct_site_gen.auth_comp_id 16 Cif _struct_site_gen.auth_asym_id 16 Cif _struct_site_gen.auth_seq_id 16 Cif _struct_site_gen.label_atom_id 16 Cif _struct_site_gen.label_alt_id 16 Cif _struct_site_gen.symmetry 16 Cif _struct_site_gen.details 17 Cif _atom_type LoopLength = 5 17 Cif _atom_type ListOfLines 17 Cif _atom_type.symbol 18 Cif _atom_site LoopLength = 2642 18 Cif _atom_site ListOfLines 18 Cif _atom_site.group_PDB 18 Cif _atom_site.id 18 Cif _atom_site.type_symbol 18 Cif _atom_site.label_atom_id 18 Cif _atom_site.label_alt_id 18 Cif _atom_site.label_comp_id 18 Cif _atom_site.label_asym_id 18 Cif _atom_site.label_entity_id 18 Cif _atom_site.label_seq_id 18 Cif _atom_site.pdbx_PDB_ins_code 18 Cif _atom_site.Cartn_x 18 Cif _atom_site.Cartn_y 18 Cif _atom_site.Cartn_z 18 Cif _atom_site.occupancy 18 Cif _atom_site.B_iso_or_equiv 18 Cif _atom_site.pdbx_formal_charge 18 Cif _atom_site.auth_seq_id 18 Cif _atom_site.auth_comp_id 18 Cif _atom_site.auth_asym_id 18 Cif _atom_site.auth_atom_id 18 Cif _atom_site.pdbx_PDB_model_num 19 Cif _pdbx_poly_seq_scheme LoopLength = 340 19 Cif _pdbx_poly_seq_scheme ListOfLines 19 Cif _pdbx_poly_seq_scheme.asym_id 19 Cif _pdbx_poly_seq_scheme.entity_id 19 Cif _pdbx_poly_seq_scheme.seq_id 19 Cif _pdbx_poly_seq_scheme.mon_id 19 Cif _pdbx_poly_seq_scheme.ndb_seq_num 19 Cif _pdbx_poly_seq_scheme.pdb_seq_num 19 Cif _pdbx_poly_seq_scheme.auth_seq_num 19 Cif _pdbx_poly_seq_scheme.pdb_mon_id 19 Cif _pdbx_poly_seq_scheme.auth_mon_id 19 Cif _pdbx_poly_seq_scheme.pdb_strand_id 19 Cif _pdbx_poly_seq_scheme.pdb_ins_code 19 Cif _pdbx_poly_seq_scheme.hetero 20 Cif _pdbx_nonpoly_scheme LoopLength = 58 20 Cif _pdbx_nonpoly_scheme ListOfLines 20 Cif _pdbx_nonpoly_scheme.asym_id 20 Cif _pdbx_nonpoly_scheme.entity_id 20 Cif _pdbx_nonpoly_scheme.mon_id 20 Cif _pdbx_nonpoly_scheme.ndb_seq_num 20 Cif _pdbx_nonpoly_scheme.pdb_seq_num 20 Cif _pdbx_nonpoly_scheme.auth_seq_num 20 Cif _pdbx_nonpoly_scheme.pdb_mon_id 20 Cif _pdbx_nonpoly_scheme.auth_mon_id 20 Cif _pdbx_nonpoly_scheme.pdb_strand_id 20 Cif _pdbx_nonpoly_scheme.pdb_ins_code 21 Cif _pdbx_struct_assembly_prop LoopLength = 3 21 Cif _pdbx_struct_assembly_prop ListOfLines 21 Cif _pdbx_struct_assembly_prop.biol_id 21 Cif _pdbx_struct_assembly_prop.type 21 Cif _pdbx_struct_assembly_prop.value 21 Cif _pdbx_struct_assembly_prop.details 22 Cif _pdbx_struct_oper_list LoopLength = 11 22 Cif _pdbx_struct_oper_list ListOfLines 22 Cif _pdbx_struct_oper_list.id 22 Cif _pdbx_struct_oper_list.type 22 Cif _pdbx_struct_oper_list.name 22 Cif _pdbx_struct_oper_list.symmetry_operation 23 Cif _pdbx_struct_conn_angle LoopLength = 24 23 Cif _pdbx_struct_conn_angle ListOfLines 23 Cif _pdbx_struct_conn_angle.id 23 Cif _pdbx_struct_conn_angle.ptnr1_label_atom_id 23 Cif _pdbx_struct_conn_angle.ptnr1_label_alt_id 23 Cif _pdbx_struct_conn_angle.ptnr1_label_asym_id 23 Cif _pdbx_struct_conn_angle.ptnr1_label_comp_id 23 Cif _pdbx_struct_conn_angle.ptnr1_label_seq_id 23 Cif _pdbx_struct_conn_angle.ptnr1_auth_atom_id 23 Cif _pdbx_struct_conn_angle.ptnr1_auth_asym_id 23 Cif _pdbx_struct_conn_angle.ptnr1_auth_comp_id 23 Cif _pdbx_struct_conn_angle.ptnr1_auth_seq_id 23 Cif _pdbx_struct_conn_angle.ptnr1_PDB_ins_code 23 Cif _pdbx_struct_conn_angle.ptnr1_symmetry 23 Cif _pdbx_struct_conn_angle.ptnr2_label_atom_id 23 Cif _pdbx_struct_conn_angle.ptnr2_label_alt_id 23 Cif _pdbx_struct_conn_angle.ptnr2_label_asym_id 23 Cif _pdbx_struct_conn_angle.ptnr2_label_comp_id 23 Cif _pdbx_struct_conn_angle.ptnr2_label_seq_id 23 Cif _pdbx_struct_conn_angle.ptnr2_auth_atom_id 23 Cif _pdbx_struct_conn_angle.ptnr2_auth_asym_id 23 Cif _pdbx_struct_conn_angle.ptnr2_auth_comp_id 23 Cif _pdbx_struct_conn_angle.ptnr2_auth_seq_id 23 Cif _pdbx_struct_conn_angle.ptnr2_PDB_ins_code 23 Cif _pdbx_struct_conn_angle.ptnr2_symmetry 23 Cif _pdbx_struct_conn_angle.ptnr3_label_atom_id 23 Cif _pdbx_struct_conn_angle.ptnr3_label_alt_id 23 Cif _pdbx_struct_conn_angle.ptnr3_label_asym_id 23 Cif _pdbx_struct_conn_angle.ptnr3_label_comp_id 23 Cif _pdbx_struct_conn_angle.ptnr3_label_seq_id 23 Cif _pdbx_struct_conn_angle.ptnr3_auth_atom_id 23 Cif _pdbx_struct_conn_angle.ptnr3_auth_asym_id 23 Cif _pdbx_struct_conn_angle.ptnr3_auth_comp_id 23 Cif _pdbx_struct_conn_angle.ptnr3_auth_seq_id 23 Cif _pdbx_struct_conn_angle.ptnr3_PDB_ins_code 23 Cif _pdbx_struct_conn_angle.ptnr3_symmetry 23 Cif _pdbx_struct_conn_angle.value 23 Cif _pdbx_struct_conn_angle.value_esd 24 Cif _pdbx_audit_revision_history LoopLength = 5 24 Cif _pdbx_audit_revision_history ListOfLines 24 Cif _pdbx_audit_revision_history.ordinal 24 Cif _pdbx_audit_revision_history.data_content_type 24 Cif _pdbx_audit_revision_history.major_revision 24 Cif _pdbx_audit_revision_history.minor_revision 24 Cif _pdbx_audit_revision_history.revision_date 25 Cif _pdbx_audit_revision_group LoopLength = 7 25 Cif _pdbx_audit_revision_group ListOfLines 25 Cif _pdbx_audit_revision_group.ordinal 25 Cif _pdbx_audit_revision_group.revision_ordinal 25 Cif _pdbx_audit_revision_group.data_content_type 25 Cif _pdbx_audit_revision_group.group 26 Cif _pdbx_audit_revision_category LoopLength = 6 26 Cif _pdbx_audit_revision_category ListOfLines 26 Cif _pdbx_audit_revision_category.ordinal 26 Cif _pdbx_audit_revision_category.revision_ordinal 26 Cif _pdbx_audit_revision_category.data_content_type 26 Cif _pdbx_audit_revision_category.category 27 Cif _pdbx_audit_revision_item LoopLength = 25 27 Cif _pdbx_audit_revision_item ListOfLines 27 Cif _pdbx_audit_revision_item.ordinal 27 Cif _pdbx_audit_revision_item.revision_ordinal 27 Cif _pdbx_audit_revision_item.data_content_type 27 Cif _pdbx_audit_revision_item.item 28 Cif _pdbx_refine_tls LoopLength = 18 28 Cif _pdbx_refine_tls ListOfLines 28 Cif _pdbx_refine_tls.id 28 Cif _pdbx_refine_tls.details 28 Cif _pdbx_refine_tls.method 28 Cif _pdbx_refine_tls.origin_x 28 Cif _pdbx_refine_tls.origin_y 28 Cif _pdbx_refine_tls.origin_z 29 Cif _software LoopLength = 5 29 Cif _software ListOfLines 29 Cif _software.name 29 Cif _software.version 29 Cif _software.date 29 Cif _software.type 29 Cif _software.contact_author 29 Cif _software.contact_author_email 29 Cif _software.classification 29 Cif _software.location 29 Cif _software.language 29 Cif _software.citation_id 29 Cif _software.pdbx_ordinal 30 Cif _pdbx_validate_torsion LoopLength = 6 30 Cif _pdbx_validate_torsion ListOfLines 30 Cif _pdbx_validate_torsion.id 30 Cif _pdbx_validate_torsion.PDB_model_num 30 Cif _pdbx_validate_torsion.auth_comp_id 30 Cif _pdbx_validate_torsion.auth_asym_id 30 Cif _pdbx_validate_torsion.auth_seq_id 30 Cif _pdbx_validate_torsion.PDB_ins_code 30 Cif _pdbx_validate_torsion.label_alt_id 30 Cif _pdbx_validate_torsion.phi 30 Cif _pdbx_validate_torsion.psi 31 Cif _pdbx_unobs_or_zero_occ_atoms LoopLength = 56 31 Cif _pdbx_unobs_or_zero_occ_atoms ListOfLines 31 Cif _pdbx_unobs_or_zero_occ_atoms.id 31 Cif _pdbx_unobs_or_zero_occ_atoms.PDB_model_num 31 Cif _pdbx_unobs_or_zero_occ_atoms.polymer_flag 31 Cif _pdbx_unobs_or_zero_occ_atoms.occupancy_flag 31 Cif _pdbx_unobs_or_zero_occ_atoms.auth_asym_id 31 Cif _pdbx_unobs_or_zero_occ_atoms.auth_comp_id 31 Cif _pdbx_unobs_or_zero_occ_atoms.auth_seq_id 31 Cif _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code 31 Cif _pdbx_unobs_or_zero_occ_atoms.auth_atom_id 31 Cif _pdbx_unobs_or_zero_occ_atoms.label_alt_id 31 Cif _pdbx_unobs_or_zero_occ_atoms.label_asym_id 31 Cif _pdbx_unobs_or_zero_occ_atoms.label_comp_id 31 Cif _pdbx_unobs_or_zero_occ_atoms.label_seq_id 31 Cif _pdbx_unobs_or_zero_occ_atoms.label_atom_id 32 Cif _pdbx_unobs_or_zero_occ_residues LoopLength = 18 32 Cif _pdbx_unobs_or_zero_occ_residues ListOfLines 32 Cif _pdbx_unobs_or_zero_occ_residues.id 32 Cif _pdbx_unobs_or_zero_occ_residues.PDB_model_num 32 Cif _pdbx_unobs_or_zero_occ_residues.polymer_flag 32 Cif _pdbx_unobs_or_zero_occ_residues.occupancy_flag 32 Cif _pdbx_unobs_or_zero_occ_residues.auth_asym_id 32 Cif _pdbx_unobs_or_zero_occ_residues.auth_comp_id 32 Cif _pdbx_unobs_or_zero_occ_residues.auth_seq_id 32 Cif _pdbx_unobs_or_zero_occ_residues.PDB_ins_code 32 Cif _pdbx_unobs_or_zero_occ_residues.label_asym_id 32 Cif _pdbx_unobs_or_zero_occ_residues.label_comp_id 32 Cif _pdbx_unobs_or_zero_occ_residues.label_seq_id 33 Cif _pdbx_entity_nonpoly LoopLength = 3 33 Cif _pdbx_entity_nonpoly ListOfLines 33 Cif _pdbx_entity_nonpoly.entity_id 33 Cif _pdbx_entity_nonpoly.name 33 Cif _pdbx_entity_nonpoly.comp_id 34 Cif _pdbx_struct_assembly_auth_evidence LoopLength = 2 34 Cif _pdbx_struct_assembly_auth_evidence ListOfLines 34 Cif _pdbx_struct_assembly_auth_evidence.id 34 Cif _pdbx_struct_assembly_auth_evidence.assembly_id 34 Cif _pdbx_struct_assembly_auth_evidence.experimental_support 34 Cif _pdbx_struct_assembly_auth_evidence.details
store/synthetases/2G36.cif Crystal structure of Tryptophanyl-tRNA synthetase (EC 6.1.1.2) (Tryptophan-tRNA ligase)(TrpRS) (tm0492) from THERMOTOGA MARITIMA at 2.50 A resolution About organisms entity 1 gene_src_taxid 2336 gene_src_Name Thermotoga maritima pdbx_org_TaxId 562 pdbx_org_Name Escherichia coli entity 1 gene_host_taxid 562 gene_host_Name Escherichia coli pdbx_org_TaxId 562 pdbx_org_Name Escherichia coli LabAsym AutAsym Entity A A 1 polymer man Tryptophanyl-tRNA B A 2 non-polymer syn IRON/SULFUR C A 3 non-polymer syn TRYPTOPHAN D A 4 water nat water ValuesOf SimpleKeys _entry.id 2G36 _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.365 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id 282365 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified _pdbx_database_status.SG_entry Y _pdbx_database_status.entry_id 2G36 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2006-02-17 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? _audit_author.name Joint Center for Structural Genomics (JCSG) _audit_author.pdbx_ordinal 1 _citation.id primary _citation.title Structure of a tryptophanyl-tRNA synthetase containing an iron-sulfur cluster. _citation.journal_abbrev Acta Crystallogr.,Sect.F _citation.journal_volume 66 _citation.page_first 1326 _citation.page_last 1334 _citation.year 2010 _citation.journal_id_ASTM ? _citation.country DK _citation.journal_id_ISSN 1744-3091 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 20944229 _citation.pdbx_database_id_DOI 10.1107/S1744309110037619 _cell.entry_id 2G36 _cell.length_a 122.890 _cell.length_b 152.730 _cell.length_c 53.070 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.pdbx_unique_axis ? _cell.Z_PDB 8 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_H-M C 2 2 21 _symmetry.entry_id 2G36 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? _entity_name_com.entity_id 1 _entity_name_com.name Tryptophan-tRNA ligase, TrpRS _entity_poly.entity_id 1 _entity_poly.type polypeptide(L) _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code MGSDKIHHHHHHMRILSGMRPTGKLHIGHLVGALENWVKLQEEGNECFYFVADWHALTTHYDDVSKLKEYTRDLVRGFLA CGIDPEKSVIFVQSGVKEHAELALLFSMIVSVSRLERVPTYKEIKSELNYKDLSTAGFLIYPVLQAADILIYKAEGVPVG EDQVYHIELTREIARRFNYLYDEVFPEPEAILSRVPKLPGTDGRKMSKSYGNIINLEISEKELEQTILRMMTDPARVRRS DPGNPENCPVWKYHQAFDISEEESKWVWEGCTTASIGCVDCKKLLLKNMKRKLAPIWENFRKIDEDPHYVDDVIMEGTKK AREVAAKTMEEVRRAMNLMF _entity_poly.pdbx_seq_one_letter_code_can MGSDKIHHHHHHMRILSGMRPTGKLHIGHLVGALENWVKLQEEGNECFYFVADWHALTTHYDDVSKLKEYTRDLVRGFLA CGIDPEKSVIFVQSGVKEHAELALLFSMIVSVSRLERVPTYKEIKSELNYKDLSTAGFLIYPVLQAADILIYKAEGVPVG EDQVYHIELTREIARRFNYLYDEVFPEPEAILSRVPKLPGTDGRKMSKSYGNIINLEISEKELEQTILRMMTDPARVRRS DPGNPENCPVWKYHQAFDISEEESKWVWEGCTTASIGCVDCKKLLLKNMKRKLAPIWENFRKIDEDPHYVDDVIMEGTKK AREVAAKTMEEVRRAMNLMF _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier 282365 _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Thermotoga _entity_src_gen.pdbx_gene_src_gene trpS _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name Thermotoga maritima _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 2336 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name Escherichia coli _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code SYW_THEMA _struct_ref.pdbx_db_accession Q9WYW2 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code MRILSGMRPTGKLHIGHLVGALENWVKLQEEGNECFYFVADWHALTTHYDDVSKLKEYTRDLVRGFLACGIDPEKSVIFV QSGVKEHAELALLFSMIVSVSRLERVPTYKEIKSELNYKDLSTAGFLIYPVLQAADILIYKAEGVPVGEDQVYHIELTRE IARRFNYLYDEVFPEPEAILSRVPKLPGTDGRKMSKSYGNIINLEISEKELEQTILRMMTDPARVRRSDPGNPENCPVWK YHQAFDISEEESKWVWEGCTTASIGCVDCKKLLLKNMKRKLAPIWENFRKIDEDPHYVDDVIMEGTKKAREVAAKTMEEV RRAMNLMF _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2G36 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 13 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 340 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9WYW2 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 328 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 328 _exptl.crystals_number 1 _exptl.method X-RAY DIFFRACTION _exptl.entry_id 2G36 _exptl_crystal.id 1 _exptl_crystal.density_percent_sol 63.17 _exptl_crystal.density_Matthews 3.37 _exptl_crystal.description ? _exptl_crystal.density_meas ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method VAPOR DIFFUSION,SITTING DROP,NANODROP _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.temp 277 _exptl_crystal_grow.pdbx_details 12.5% PEG-3000, 0.25M MgCl2, 0.1M Cacodylate pH 6.5, VAPOR DIFFUSION,SITTING DROP,NANODROP, temperature 277K _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range . _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type ADSC QUANTUM 315 _diffrn_detector.details ? _diffrn_detector.pdbx_collection_date 2005-12-15 _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator Double Crystal Si(111) _diffrn_radiation.pdbx_diffrn_protocol SINGLE WAVELENGTH _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_scattering_type x-ray _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.00 _diffrn_radiation_wavelength.wt 1.0 _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.pdbx_synchrotron_beamline 8.2.2 _diffrn_source.type ALS BEAMLINE 8.2.2 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.00 _diffrn_source.pdbx_synchrotron_site ALS _reflns.entry_id 2G36 _reflns.d_resolution_high 2.500 _reflns.number_obs 17636 _reflns.pdbx_Rmerge_I_obs 0.078 _reflns.pdbx_netI_over_sigmaI 8.820 _reflns.percent_possible_obs 91.400 _reflns.B_iso_Wilson_estimate 49.406 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.d_resolution_low 29.64 _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_redundancy 1.93 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 _refine.ls_d_res_high 2.500 _refine.ls_d_res_low 29.64 _refine.pdbx_ls_sigma_F 0.00 _refine.ls_percent_reflns_obs 99.280 _refine.ls_number_reflns_obs 17623 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details (1) HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. (2) IN THE ACTIVE SITE, L-TRYPTOPHAN WAS MODELLED BASED ON ELECTRON DENSITY. (3) A [4FE-4S] IS COORDINATED TO THE SIDE CHAINS OF CYS 236,259,266 AND 269. BASED ON ELECTRON DENSITY AND ITS GEOMETRY, IRON SULFUR CLUSTER IS VERY CONCLUSIVE. X-RAY FLUORESCENCE EXPERIMENTS CONFIRMED THE PRESENCE OF IRON. (4) THE RESIDUES OF A113 TO A119 WERE NOT VISIBLE IN THE ELECTRON DENSITY MAPS. _refine.ls_R_factor_all 0.197 _refine.ls_R_factor_R_work 0.194 _refine.ls_R_factor_R_free 0.256 _refine.ls_percent_reflns_R_free 5.100 _refine.ls_number_reflns_R_free 894 _refine.B_iso_mean 35.567 _refine.correlation_coeff_Fo_to_Fc 0.950 _refine.correlation_coeff_Fo_to_Fc_free 0.921 _refine.pdbx_overall_ESU_R 0.324 _refine.pdbx_overall_ESU_R_Free 0.259 _refine.overall_SU_ML 0.196 _refine.overall_SU_B 19.016 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_method_to_determine_struct MOLECULAR REPLACEMENT _refine.pdbx_stereochemistry_target_values MAXIMUM LIKELIHOOD _refine.pdbx_starting_model 1yi8B _refine.entry_id 2G36 _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all ? _refine.ls_R_factor_obs 0.19724 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id X-RAY DIFFRACTION _refine.pdbx_TLS_residual_ADP_flag LIKELY RESIDUAL _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine_hist.pdbx_refine_id X-RAY DIFFRACTION _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2547 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 23 _refine_hist.number_atoms_solvent 56 _refine_hist.number_atoms_total 2626 _refine_hist.d_res_high 2.500 _refine_hist.d_res_low 29.64 _refine_ls_shell.d_res_high 2.500 _refine_ls_shell.d_res_low 2.565 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 98.910 _refine_ls_shell.number_reflns_R_work 1213 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.327 _refine_ls_shell.R_factor_R_free 0.463 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 61 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs 1274 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id X-RAY DIFFRACTION _struct.entry_id 2G36 _struct.title Crystal structure of Tryptophanyl-tRNA synthetase (EC 6.1.1.2) (Tryptophan-tRNA ligase)(TrpRS) (tm0492) from THERMOTOGA MARITIMA at 2.50 A resolution _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? _struct_keywords.text tm0492, Tryptophanyl-tRNA synthetase (EC 6.1.1.2) (Tryptophan-tRNA ligase)(TrpRS), Structural Genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI, LIGASE _struct_keywords.pdbx_keywords LIGASE _struct_keywords.entry_id 2G36 _struct_biol.id 1 _struct_biol.details SIZE EXCLUSION CHROMATOGRAPHY WITH STATIC LIGHT SCATTERING SUPPORTS THE ASSIGNMENT OF A DIMER AS A BIOLOGICALLY SIGNIFICANT OLIGIMERIZATION STATE. _struct_biol.pdbx_parent_biol_id ? _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? _atom_sites.entry_id 2G36 _pdbx_SG_project.project_name PSI, Protein Structure Initiative _pdbx_SG_project.full_name_of_center Joint Center for Structural Genomics _pdbx_SG_project.id 1 _pdbx_SG_project.initial_of_center JCSG _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type Structure model _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type Initial release _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.selection_details _phasing.method MR _pdbx_database_remark.id 300 _pdbx_database_remark.text BIOMOLECULE: 1 THIS ENTRY CONTAINS THE CRYSTALLOGRAPHIC ASYMMETRIC UNIT WHICH CONSISTS OF 1 CHAIN(S). SEE REMARK 350 FOR INFORMATION ON GENERATING THE BIOLOGICAL MOLECULE(S). SIZE EXCLUSION CHROMATOGRAPHY WITH STATIC LIGHT SCATTERING SUPPORTS THE ASSIGNMENT OF A DIMER AS A BIOLOGICALLY SIGNIFICANT OLIGIMERIZATION STATE. _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 OH _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 TYR _pdbx_validate_close_contact.auth_seq_id_1 129 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 N _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 TRP _pdbx_validate_close_contact.auth_seq_id_2 401 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.11

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