Crystallographic Information File browser    Powered by zincr within Tanzer
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      This Crystallographic Information File browser gives acces to the content of the Cif file
      Data are stored in two ways, SimpleKey - value, or LoopKeys whith lists of values.
      
      First select a Cif file
            give a CifEntry (ie 1qru) it will be dowloaded from  https://files.rcsb.org/download/1qru.cif"
         or get existing files from the server
         or upload a cif file from your computer
      
      Some relevant data are automatically displayed on the main page
      In the left part of the page click on a GlobalKey, a SimpleKey or a LoopKey with subkey 

      Get help about available Cif functions with Cif Help, CifAsym Help, CifEntity Help, etc
      All these functions can be called in command line mode
          or from any other program querying gscope directly
          or through the CafeDesScience (qds Zero Cif Help)
          or as webservice (see Cif Help)
          

      See the 3d structure with the Ngl button
      
      Raymond
      
To get a Cif file :    Give a cif entry    or    Get a file from the server Get a file from the server and press    or    Upload your file Upload your file : first then select the server directory and ... current Cif store/synthetases/4Q6G.cif


see global keys
Cif Help Cif File Value Cif Text Cif ValuesOf SimpleKeys Cif ListOf Key Cif ListOf SimpleKey Cif ListOf SimpleKeyClass Cif ListOf LoopKey Cif ListOf LoopKeyClass Cif AsymAndEntities Cif _entity ListOfLines CifEntity CifEntity Help CifEntity 2 _entity pdbx_description CifEntity 2 Sequence CifEx Help CifAsym Help CifAsym ListOf LabelAuth CifAsym ListOf Label CifAsym L Auth CifAsym A Label CifAsym Auth_A _entity.id
see simple Cif keys
Cif _entry.id Cif _audit_conform.dict_name Cif _audit_conform.dict_version Cif _audit_conform.dict_location Cif _pdbx_database_status.status_code Cif _pdbx_database_status.entry_id Cif _pdbx_database_status.recvd_initial_deposition_date Cif _pdbx_database_status.deposit_site Cif _pdbx_database_status.process_site Cif _pdbx_database_status.status_code_sf Cif _pdbx_database_status.status_code_mr Cif _pdbx_database_status.SG_entry Cif _pdbx_database_status.status_code_cs Cif _pdbx_database_status.methods_development_category Cif _pdbx_database_status.pdb_format_compatible Cif _citation.id Cif _citation.title Cif _citation.journal_abbrev Cif _citation.journal_volume Cif _citation.page_first Cif _citation.page_last Cif _citation.year Cif _citation.journal_id_ASTM Cif _citation.country Cif _citation.journal_id_ISSN Cif _citation.journal_id_CSD Cif _citation.book_publisher Cif _citation.pdbx_database_id_PubMed Cif _citation.pdbx_database_id_DOI Cif _cell.entry_id Cif _cell.length_a Cif _cell.length_b Cif _cell.length_c Cif _cell.angle_alpha Cif _cell.angle_beta Cif _cell.angle_gamma Cif _cell.Z_PDB Cif _cell.pdbx_unique_axis Cif _cell.length_a_esd Cif _cell.length_b_esd Cif _cell.length_c_esd Cif _cell.angle_alpha_esd Cif _cell.angle_beta_esd Cif _cell.angle_gamma_esd Cif _symmetry.entry_id Cif _symmetry.space_group_name_H-M Cif _symmetry.pdbx_full_space_group_name_H-M Cif _symmetry.cell_setting Cif _symmetry.Int_Tables_number Cif _symmetry.space_group_name_Hall Cif _entity_name_com.entity_id Cif _entity_name_com.name Cif _entity_poly.entity_id Cif _entity_poly.type Cif _entity_poly.nstd_linkage Cif _entity_poly.nstd_monomer Cif _entity_poly.pdbx_seq_one_letter_code Cif _entity_poly.pdbx_seq_one_letter_code_can Cif _entity_poly.pdbx_strand_id Cif _entity_poly.pdbx_target_identifier Cif _entity_src_gen.entity_id Cif _entity_src_gen.pdbx_src_id Cif _entity_src_gen.pdbx_alt_source_flag Cif _entity_src_gen.pdbx_seq_type Cif _entity_src_gen.pdbx_beg_seq_num Cif _entity_src_gen.pdbx_end_seq_num Cif _entity_src_gen.gene_src_common_name Cif _entity_src_gen.gene_src_genus Cif _entity_src_gen.pdbx_gene_src_gene Cif _entity_src_gen.gene_src_species Cif _entity_src_gen.gene_src_strain Cif _entity_src_gen.gene_src_tissue Cif _entity_src_gen.gene_src_tissue_fraction Cif _entity_src_gen.gene_src_details Cif _entity_src_gen.pdbx_gene_src_fragment Cif _entity_src_gen.pdbx_gene_src_scientific_name Cif _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id Cif _entity_src_gen.pdbx_gene_src_variant Cif _entity_src_gen.pdbx_gene_src_cell_line Cif _entity_src_gen.pdbx_gene_src_atcc Cif _entity_src_gen.pdbx_gene_src_organ Cif _entity_src_gen.pdbx_gene_src_organelle Cif _entity_src_gen.pdbx_gene_src_cell Cif _entity_src_gen.pdbx_gene_src_cellular_location Cif _entity_src_gen.host_org_common_name Cif _entity_src_gen.pdbx_host_org_scientific_name Cif _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id Cif _entity_src_gen.host_org_genus Cif _entity_src_gen.pdbx_host_org_gene Cif _entity_src_gen.pdbx_host_org_organ Cif _entity_src_gen.host_org_species Cif _entity_src_gen.pdbx_host_org_tissue Cif _entity_src_gen.pdbx_host_org_tissue_fraction Cif _entity_src_gen.pdbx_host_org_strain Cif _entity_src_gen.pdbx_host_org_variant Cif _entity_src_gen.pdbx_host_org_cell_line Cif _entity_src_gen.pdbx_host_org_atcc Cif _entity_src_gen.pdbx_host_org_culture_collection Cif _entity_src_gen.pdbx_host_org_cell Cif _entity_src_gen.pdbx_host_org_organelle Cif _entity_src_gen.pdbx_host_org_cellular_location Cif _entity_src_gen.pdbx_host_org_vector_type Cif _entity_src_gen.pdbx_host_org_vector Cif _entity_src_gen.host_org_details Cif _entity_src_gen.expression_system_id Cif _entity_src_gen.plasmid_name Cif _entity_src_gen.plasmid_details Cif _entity_src_gen.pdbx_description Cif _struct_ref.id Cif _struct_ref.db_name Cif _struct_ref.db_code Cif _struct_ref.pdbx_db_accession Cif _struct_ref.entity_id Cif _struct_ref.pdbx_seq_one_letter_code Cif _struct_ref.pdbx_align_begin Cif _struct_ref.pdbx_db_isoform Cif _struct_ref_seq.align_id Cif _struct_ref_seq.ref_id Cif _struct_ref_seq.pdbx_PDB_id_code Cif _struct_ref_seq.pdbx_strand_id Cif _struct_ref_seq.seq_align_beg Cif _struct_ref_seq.pdbx_seq_align_beg_ins_code Cif _struct_ref_seq.seq_align_end Cif _struct_ref_seq.pdbx_seq_align_end_ins_code Cif _struct_ref_seq.pdbx_db_accession Cif _struct_ref_seq.db_align_beg Cif _struct_ref_seq.pdbx_db_align_beg_ins_code Cif _struct_ref_seq.db_align_end Cif _struct_ref_seq.pdbx_db_align_end_ins_code Cif _struct_ref_seq.pdbx_auth_seq_align_beg Cif _struct_ref_seq.pdbx_auth_seq_align_end Cif _exptl.entry_id Cif _exptl.method Cif _exptl.crystals_number Cif _exptl_crystal.id Cif _exptl_crystal.density_meas Cif _exptl_crystal.density_Matthews Cif _exptl_crystal.density_percent_sol Cif _exptl_crystal.description Cif _exptl_crystal.F_000 Cif _exptl_crystal.preparation Cif _exptl_crystal_grow.crystal_id Cif _exptl_crystal_grow.method Cif _exptl_crystal_grow.temp Cif _exptl_crystal_grow.temp_details Cif _exptl_crystal_grow.pH Cif _exptl_crystal_grow.pdbx_pH_range Cif _exptl_crystal_grow.pdbx_details Cif _diffrn.id Cif _diffrn.ambient_temp Cif _diffrn.ambient_temp_details Cif _diffrn.crystal_id Cif _diffrn_detector.diffrn_id Cif _diffrn_detector.detector Cif _diffrn_detector.type Cif _diffrn_detector.pdbx_collection_date Cif _diffrn_detector.details Cif _diffrn_radiation.diffrn_id Cif _diffrn_radiation.wavelength_id Cif _diffrn_radiation.pdbx_monochromatic_or_laue_m_l Cif _diffrn_radiation.monochromator Cif _diffrn_radiation.pdbx_diffrn_protocol Cif _diffrn_radiation.pdbx_scattering_type Cif _diffrn_radiation_wavelength.id Cif _diffrn_radiation_wavelength.wavelength Cif _diffrn_radiation_wavelength.wt Cif _diffrn_source.diffrn_id Cif _diffrn_source.source Cif _diffrn_source.type Cif _diffrn_source.pdbx_synchrotron_site Cif _diffrn_source.pdbx_synchrotron_beamline Cif _diffrn_source.pdbx_wavelength Cif _diffrn_source.pdbx_wavelength_list Cif _reflns.pdbx_diffrn_id Cif _reflns.pdbx_ordinal Cif _reflns.entry_id Cif _reflns.observed_criterion_sigma_I Cif _reflns.observed_criterion_sigma_F Cif _reflns.d_resolution_low Cif _reflns.d_resolution_high Cif _reflns.number_obs Cif _reflns.number_all Cif _reflns.percent_possible_obs Cif _reflns.pdbx_Rmerge_I_obs Cif _reflns.pdbx_Rsym_value Cif _reflns.pdbx_netI_over_sigmaI Cif _reflns.B_iso_Wilson_estimate Cif _reflns.pdbx_redundancy Cif _reflns.R_free_details Cif _reflns.limit_h_max Cif _reflns.limit_h_min Cif _reflns.limit_k_max Cif _reflns.limit_k_min Cif _reflns.limit_l_max Cif _reflns.limit_l_min Cif _reflns.observed_criterion_F_max Cif _reflns.observed_criterion_F_min Cif _reflns.pdbx_chi_squared Cif _reflns.pdbx_scaling_rejects Cif _refine.pdbx_refine_id Cif _refine.entry_id Cif _refine.pdbx_diffrn_id Cif _refine.pdbx_TLS_residual_ADP_flag Cif _refine.ls_number_reflns_obs Cif _refine.ls_number_reflns_all Cif _refine.pdbx_ls_sigma_I Cif _refine.pdbx_ls_sigma_F Cif _refine.pdbx_data_cutoff_high_absF Cif _refine.pdbx_data_cutoff_low_absF Cif _refine.pdbx_data_cutoff_high_rms_absF Cif _refine.ls_d_res_low Cif _refine.ls_d_res_high Cif _refine.ls_percent_reflns_obs Cif _refine.ls_R_factor_obs Cif _refine.ls_R_factor_all Cif _refine.ls_R_factor_R_work Cif _refine.ls_R_factor_R_free Cif _refine.ls_R_factor_R_free_error Cif _refine.ls_R_factor_R_free_error_details Cif _refine.ls_percent_reflns_R_free Cif _refine.ls_number_reflns_R_free Cif _refine.ls_number_parameters Cif _refine.ls_number_restraints Cif _refine.occupancy_min Cif _refine.occupancy_max Cif _refine.correlation_coeff_Fo_to_Fc Cif _refine.correlation_coeff_Fo_to_Fc_free Cif _refine.B_iso_mean Cif _refine.solvent_model_details Cif _refine.solvent_model_param_ksol Cif _refine.solvent_model_param_bsol Cif _refine.pdbx_solvent_vdw_probe_radii Cif _refine.pdbx_solvent_ion_probe_radii Cif _refine.pdbx_solvent_shrinkage_radii Cif _refine.pdbx_ls_cross_valid_method Cif _refine.details Cif _refine.pdbx_starting_model Cif _refine.pdbx_method_to_determine_struct Cif _refine.pdbx_isotropic_thermal_model Cif _refine.pdbx_stereochemistry_target_values Cif _refine.pdbx_stereochem_target_val_spec_case Cif _refine.pdbx_R_Free_selection_details Cif _refine.pdbx_overall_ESU_R Cif _refine.pdbx_overall_ESU_R_Free Cif _refine.overall_SU_ML Cif _refine.pdbx_overall_phase_error Cif _refine.overall_SU_B Cif _refine.overall_SU_R_Cruickshank_DPI Cif _refine.pdbx_overall_SU_R_free_Cruickshank_DPI Cif _refine.pdbx_overall_SU_R_Blow_DPI Cif _refine.pdbx_overall_SU_R_free_Blow_DPI Cif _refine.ls_redundancy_reflns_obs Cif _refine.B_iso_min Cif _refine.B_iso_max Cif _refine.overall_SU_R_free Cif _refine.ls_wR_factor_R_free Cif _refine.ls_wR_factor_R_work Cif _refine.overall_FOM_free_R_set Cif _refine.overall_FOM_work_R_set Cif _refine_hist.pdbx_refine_id Cif _refine_hist.cycle_id Cif _refine_hist.pdbx_number_atoms_protein Cif _refine_hist.pdbx_number_atoms_nucleic_acid Cif _refine_hist.pdbx_number_atoms_ligand Cif _refine_hist.number_atoms_solvent Cif _refine_hist.number_atoms_total Cif _refine_hist.d_res_high Cif _refine_hist.d_res_low Cif _refine_ls_shell.pdbx_refine_id Cif _refine_ls_shell.pdbx_total_number_of_bins_used Cif _refine_ls_shell.d_res_high Cif _refine_ls_shell.d_res_low Cif _refine_ls_shell.number_reflns_R_work Cif _refine_ls_shell.R_factor_R_work Cif _refine_ls_shell.percent_reflns_obs Cif _refine_ls_shell.R_factor_R_free Cif _refine_ls_shell.R_factor_R_free_error Cif _refine_ls_shell.percent_reflns_R_free Cif _refine_ls_shell.number_reflns_R_free Cif _refine_ls_shell.number_reflns_all Cif _refine_ls_shell.R_factor_all Cif _refine_ls_shell.redundancy_reflns_obs Cif _refine_ls_shell.number_reflns_obs Cif _pdbx_refine.pdbx_refine_id Cif _pdbx_refine.entry_id Cif _pdbx_refine.R_factor_all_no_cutoff Cif _pdbx_refine.R_factor_obs_no_cutoff Cif _pdbx_refine.free_R_factor_no_cutoff Cif _pdbx_refine.free_R_error_no_cutoff Cif _pdbx_refine.free_R_val_test_set_size_perc_no_cutoff Cif _pdbx_refine.free_R_val_test_set_ct_no_cutoff Cif _pdbx_refine.R_factor_all_4sig_cutoff Cif _pdbx_refine.R_factor_obs_4sig_cutoff Cif _pdbx_refine.free_R_factor_4sig_cutoff Cif _pdbx_refine.free_R_val_test_set_size_perc_4sig_cutoff Cif _pdbx_refine.free_R_val_test_set_ct_4sig_cutoff Cif _pdbx_refine.number_reflns_obs_4sig_cutoff Cif _struct.entry_id Cif _struct.title Cif _struct.pdbx_descriptor Cif _struct.pdbx_model_details Cif _struct.pdbx_CASP_flag Cif _struct.pdbx_model_type_details Cif _struct_keywords.entry_id Cif _struct_keywords.pdbx_keywords Cif _struct_keywords.text Cif _struct_biol.id Cif _struct_biol.details Cif _struct_conf_type.id Cif _struct_conf_type.criteria Cif _struct_conf_type.reference Cif _database_PDB_matrix.entry_id Cif _atom_sites.entry_id Cif _pdbx_struct_assembly.id Cif _pdbx_struct_assembly.details Cif _pdbx_struct_assembly.method_details Cif _pdbx_struct_assembly.oligomeric_details Cif _pdbx_struct_assembly.oligomeric_count Cif _pdbx_struct_assembly_gen.assembly_id Cif _pdbx_struct_assembly_gen.oper_expression Cif _pdbx_struct_assembly_gen.asym_id_list Cif _pdbx_struct_oper_list.id Cif _pdbx_struct_oper_list.type Cif _pdbx_struct_oper_list.name Cif _pdbx_struct_oper_list.symmetry_operation Cif _pdbx_audit_revision_details.ordinal Cif _pdbx_audit_revision_details.revision_ordinal Cif _pdbx_audit_revision_details.data_content_type Cif _pdbx_audit_revision_details.provider Cif _pdbx_audit_revision_details.type Cif _pdbx_audit_revision_details.description Cif _pdbx_entry_details.entry_id Cif _pdbx_entry_details.nonpolymer_details Cif _pdbx_entry_details.sequence_details Cif _pdbx_entry_details.compound_details Cif _pdbx_entry_details.source_details
see Loop Cif keys
0 Cif _database_2 LoopLength = 3 0 Cif _database_2 ListOfLines 0 Cif _database_2.database_id 0 Cif _database_2.database_code 1 Cif _audit_author LoopLength = 3 1 Cif _audit_author ListOfLines 1 Cif _audit_author.name 1 Cif _audit_author.pdbx_ordinal 2 Cif _citation_author LoopLength = 10 2 Cif _citation_author ListOfLines 2 Cif _citation_author.citation_id 2 Cif _citation_author.name 2 Cif _citation_author.ordinal 3 Cif _entity LoopLength = 5 3 Cif _entity ListOfLines 3 Cif _entity.id 3 Cif _entity.type 3 Cif _entity.src_method 3 Cif _entity.pdbx_description 3 Cif _entity.formula_weight 3 Cif _entity.pdbx_number_of_molecules 3 Cif _entity.pdbx_ec 3 Cif _entity.pdbx_mutation 3 Cif _entity.pdbx_fragment 3 Cif _entity.details 4 Cif _entity_poly_seq LoopLength = 267 4 Cif _entity_poly_seq ListOfLines 4 Cif _entity_poly_seq.entity_id 4 Cif _entity_poly_seq.num 4 Cif _entity_poly_seq.mon_id 4 Cif _entity_poly_seq.hetero 5 Cif _struct_ref_seq_dif LoopLength = 6 5 Cif _struct_ref_seq_dif ListOfLines 5 Cif _struct_ref_seq_dif.align_id 5 Cif _struct_ref_seq_dif.pdbx_pdb_id_code 5 Cif _struct_ref_seq_dif.mon_id 5 Cif _struct_ref_seq_dif.pdbx_pdb_strand_id 5 Cif _struct_ref_seq_dif.seq_num 5 Cif _struct_ref_seq_dif.pdbx_pdb_ins_code 5 Cif _struct_ref_seq_dif.pdbx_seq_db_name 5 Cif _struct_ref_seq_dif.pdbx_seq_db_accession_code 5 Cif _struct_ref_seq_dif.db_mon_id 5 Cif _struct_ref_seq_dif.pdbx_seq_db_seq_num 5 Cif _struct_ref_seq_dif.details 5 Cif _struct_ref_seq_dif.pdbx_auth_seq_num 5 Cif _struct_ref_seq_dif.pdbx_ordinal 6 Cif _chem_comp LoopLength = 24 6 Cif _chem_comp ListOfLines 6 Cif _chem_comp.id 6 Cif _chem_comp.type 6 Cif _chem_comp.mon_nstd_flag 6 Cif _chem_comp.name 6 Cif _chem_comp.pdbx_synonyms 6 Cif _chem_comp.formula 6 Cif _chem_comp.formula_weight 7 Cif _reflns_shell LoopLength = 10 7 Cif _reflns_shell ListOfLines 7 Cif _reflns_shell.pdbx_diffrn_id 7 Cif _reflns_shell.pdbx_ordinal 7 Cif _reflns_shell.d_res_high 7 Cif _reflns_shell.d_res_low 7 Cif _reflns_shell.percent_possible_all 7 Cif _reflns_shell.Rmerge_I_obs 7 Cif _reflns_shell.pdbx_Rsym_value 7 Cif _reflns_shell.meanI_over_sigI_obs 7 Cif _reflns_shell.pdbx_redundancy 7 Cif _reflns_shell.percent_possible_obs 7 Cif _reflns_shell.number_unique_all 7 Cif _reflns_shell.number_measured_all 7 Cif _reflns_shell.number_measured_obs 7 Cif _reflns_shell.number_unique_obs 7 Cif _reflns_shell.pdbx_chi_squared 8 Cif _refine_ls_restr LoopLength = 38 8 Cif _refine_ls_restr ListOfLines 8 Cif _refine_ls_restr.type 8 Cif _refine_ls_restr.dev_ideal 8 Cif _refine_ls_restr.dev_ideal_target 8 Cif _refine_ls_restr.weight 8 Cif _refine_ls_restr.number 8 Cif _refine_ls_restr.pdbx_refine_id 8 Cif _refine_ls_restr.pdbx_restraint_function 9 Cif _struct_asym LoopLength = 10 9 Cif _struct_asym ListOfLines 9 Cif _struct_asym.id 9 Cif _struct_asym.pdbx_blank_PDB_chainid_flag 9 Cif _struct_asym.pdbx_modified 9 Cif _struct_asym.entity_id 9 Cif _struct_asym.details 10 Cif _struct_conf LoopLength = 10 10 Cif _struct_conf ListOfLines 10 Cif _struct_conf.conf_type_id 10 Cif _struct_conf.id 10 Cif _struct_conf.pdbx_PDB_helix_id 10 Cif _struct_conf.beg_label_comp_id 10 Cif _struct_conf.beg_label_asym_id 10 Cif _struct_conf.beg_label_seq_id 10 Cif _struct_conf.pdbx_beg_PDB_ins_code 10 Cif _struct_conf.end_label_comp_id 10 Cif _struct_conf.end_label_asym_id 10 Cif _struct_conf.end_label_seq_id 10 Cif _struct_conf.pdbx_end_PDB_ins_code 10 Cif _struct_conf.beg_auth_comp_id 10 Cif _struct_conf.beg_auth_asym_id 10 Cif _struct_conf.beg_auth_seq_id 10 Cif _struct_conf.end_auth_comp_id 10 Cif _struct_conf.end_auth_asym_id 10 Cif _struct_conf.end_auth_seq_id 10 Cif _struct_conf.pdbx_PDB_helix_class 10 Cif _struct_conf.details 10 Cif _struct_conf.pdbx_PDB_helix_length 11 Cif _struct_mon_prot_cis LoopLength = 2 11 Cif _struct_mon_prot_cis ListOfLines 11 Cif _struct_mon_prot_cis.pdbx_id 11 Cif _struct_mon_prot_cis.label_comp_id 11 Cif _struct_mon_prot_cis.label_seq_id 11 Cif _struct_mon_prot_cis.label_asym_id 11 Cif _struct_mon_prot_cis.label_alt_id 11 Cif _struct_mon_prot_cis.pdbx_PDB_ins_code 11 Cif _struct_mon_prot_cis.auth_comp_id 11 Cif _struct_mon_prot_cis.auth_seq_id 11 Cif _struct_mon_prot_cis.auth_asym_id 11 Cif _struct_mon_prot_cis.pdbx_label_comp_id_2 11 Cif _struct_mon_prot_cis.pdbx_label_seq_id_2 11 Cif _struct_mon_prot_cis.pdbx_label_asym_id_2 11 Cif _struct_mon_prot_cis.pdbx_PDB_ins_code_2 11 Cif _struct_mon_prot_cis.pdbx_auth_comp_id_2 11 Cif _struct_mon_prot_cis.pdbx_auth_seq_id_2 11 Cif _struct_mon_prot_cis.pdbx_auth_asym_id_2 11 Cif _struct_mon_prot_cis.pdbx_PDB_model_num 11 Cif _struct_mon_prot_cis.pdbx_omega_angle 12 Cif _struct_sheet LoopLength = 3 12 Cif _struct_sheet ListOfLines 12 Cif _struct_sheet.id 12 Cif _struct_sheet.type 12 Cif _struct_sheet.number_strands 12 Cif _struct_sheet.details 13 Cif _struct_sheet_order LoopLength = 8 13 Cif _struct_sheet_order ListOfLines 13 Cif _struct_sheet_order.sheet_id 13 Cif _struct_sheet_order.range_id_1 13 Cif _struct_sheet_order.range_id_2 13 Cif _struct_sheet_order.offset 13 Cif _struct_sheet_order.sense 14 Cif _struct_sheet_range LoopLength = 11 14 Cif _struct_sheet_range ListOfLines 14 Cif _struct_sheet_range.sheet_id 14 Cif _struct_sheet_range.id 14 Cif _struct_sheet_range.beg_label_comp_id 14 Cif _struct_sheet_range.beg_label_asym_id 14 Cif _struct_sheet_range.beg_label_seq_id 14 Cif _struct_sheet_range.pdbx_beg_PDB_ins_code 14 Cif _struct_sheet_range.end_label_comp_id 14 Cif _struct_sheet_range.end_label_asym_id 14 Cif _struct_sheet_range.end_label_seq_id 14 Cif _struct_sheet_range.pdbx_end_PDB_ins_code 14 Cif _struct_sheet_range.beg_auth_comp_id 14 Cif _struct_sheet_range.beg_auth_asym_id 14 Cif _struct_sheet_range.beg_auth_seq_id 14 Cif _struct_sheet_range.end_auth_comp_id 14 Cif _struct_sheet_range.end_auth_asym_id 14 Cif _struct_sheet_range.end_auth_seq_id 15 Cif _pdbx_struct_sheet_hbond LoopLength = 8 15 Cif _pdbx_struct_sheet_hbond ListOfLines 15 Cif _pdbx_struct_sheet_hbond.sheet_id 15 Cif _pdbx_struct_sheet_hbond.range_id_1 15 Cif _pdbx_struct_sheet_hbond.range_id_2 15 Cif _pdbx_struct_sheet_hbond.range_1_label_atom_id 15 Cif _pdbx_struct_sheet_hbond.range_1_label_comp_id 15 Cif _pdbx_struct_sheet_hbond.range_1_label_asym_id 15 Cif _pdbx_struct_sheet_hbond.range_1_label_seq_id 15 Cif _pdbx_struct_sheet_hbond.range_1_PDB_ins_code 15 Cif _pdbx_struct_sheet_hbond.range_1_auth_atom_id 15 Cif _pdbx_struct_sheet_hbond.range_1_auth_comp_id 15 Cif _pdbx_struct_sheet_hbond.range_1_auth_asym_id 15 Cif _pdbx_struct_sheet_hbond.range_1_auth_seq_id 15 Cif _pdbx_struct_sheet_hbond.range_2_label_atom_id 15 Cif _pdbx_struct_sheet_hbond.range_2_label_comp_id 15 Cif _pdbx_struct_sheet_hbond.range_2_label_asym_id 15 Cif _pdbx_struct_sheet_hbond.range_2_label_seq_id 15 Cif _pdbx_struct_sheet_hbond.range_2_PDB_ins_code 15 Cif _pdbx_struct_sheet_hbond.range_2_auth_atom_id 15 Cif _pdbx_struct_sheet_hbond.range_2_auth_comp_id 15 Cif _pdbx_struct_sheet_hbond.range_2_auth_asym_id 15 Cif _pdbx_struct_sheet_hbond.range_2_auth_seq_id 16 Cif _struct_site LoopLength = 8 16 Cif _struct_site ListOfLines 16 Cif _struct_site.id 16 Cif _struct_site.pdbx_evidence_code 16 Cif _struct_site.pdbx_auth_asym_id 16 Cif _struct_site.pdbx_auth_comp_id 16 Cif _struct_site.pdbx_auth_seq_id 16 Cif _struct_site.pdbx_auth_ins_code 16 Cif _struct_site.pdbx_num_residues 16 Cif _struct_site.details 17 Cif _struct_site_gen LoopLength = 65 17 Cif _struct_site_gen ListOfLines 17 Cif _struct_site_gen.id 17 Cif _struct_site_gen.site_id 17 Cif _struct_site_gen.pdbx_num_res 17 Cif _struct_site_gen.label_comp_id 17 Cif _struct_site_gen.label_asym_id 17 Cif _struct_site_gen.label_seq_id 17 Cif _struct_site_gen.pdbx_auth_ins_code 17 Cif _struct_site_gen.auth_comp_id 17 Cif _struct_site_gen.auth_asym_id 17 Cif _struct_site_gen.auth_seq_id 17 Cif _struct_site_gen.label_atom_id 17 Cif _struct_site_gen.label_alt_id 17 Cif _struct_site_gen.symmetry 17 Cif _struct_site_gen.details 18 Cif _atom_type LoopLength = 5 18 Cif _atom_type ListOfLines 18 Cif _atom_type.symbol 19 Cif _atom_site LoopLength = 2394 19 Cif _atom_site ListOfLines 19 Cif _atom_site.group_PDB 19 Cif _atom_site.id 19 Cif _atom_site.type_symbol 19 Cif _atom_site.label_atom_id 19 Cif _atom_site.label_alt_id 19 Cif _atom_site.label_comp_id 19 Cif _atom_site.label_asym_id 19 Cif _atom_site.label_entity_id 19 Cif _atom_site.label_seq_id 19 Cif _atom_site.pdbx_PDB_ins_code 19 Cif _atom_site.Cartn_x 19 Cif _atom_site.Cartn_y 19 Cif _atom_site.Cartn_z 19 Cif _atom_site.occupancy 19 Cif _atom_site.B_iso_or_equiv 19 Cif _atom_site.pdbx_formal_charge 19 Cif _atom_site.auth_seq_id 19 Cif _atom_site.auth_comp_id 19 Cif _atom_site.auth_asym_id 19 Cif _atom_site.auth_atom_id 19 Cif _atom_site.pdbx_PDB_model_num 20 Cif _pdbx_poly_seq_scheme LoopLength = 267 20 Cif _pdbx_poly_seq_scheme ListOfLines 20 Cif _pdbx_poly_seq_scheme.asym_id 20 Cif _pdbx_poly_seq_scheme.entity_id 20 Cif _pdbx_poly_seq_scheme.seq_id 20 Cif _pdbx_poly_seq_scheme.mon_id 20 Cif _pdbx_poly_seq_scheme.ndb_seq_num 20 Cif _pdbx_poly_seq_scheme.pdb_seq_num 20 Cif _pdbx_poly_seq_scheme.auth_seq_num 20 Cif _pdbx_poly_seq_scheme.pdb_mon_id 20 Cif _pdbx_poly_seq_scheme.auth_mon_id 20 Cif _pdbx_poly_seq_scheme.pdb_strand_id 20 Cif _pdbx_poly_seq_scheme.pdb_ins_code 20 Cif _pdbx_poly_seq_scheme.hetero 21 Cif _pdbx_audit_revision_history LoopLength = 3 21 Cif _pdbx_audit_revision_history ListOfLines 21 Cif _pdbx_audit_revision_history.ordinal 21 Cif _pdbx_audit_revision_history.data_content_type 21 Cif _pdbx_audit_revision_history.major_revision 21 Cif _pdbx_audit_revision_history.minor_revision 21 Cif _pdbx_audit_revision_history.revision_date 22 Cif _pdbx_audit_revision_group LoopLength = 2 22 Cif _pdbx_audit_revision_group ListOfLines 22 Cif _pdbx_audit_revision_group.ordinal 22 Cif _pdbx_audit_revision_group.revision_ordinal 22 Cif _pdbx_audit_revision_group.data_content_type 22 Cif _pdbx_audit_revision_group.group 23 Cif _software LoopLength = 5 23 Cif _software ListOfLines 23 Cif _software.name 23 Cif _software.classification 23 Cif _software.version 23 Cif _software.citation_id 23 Cif _software.pdbx_ordinal 24 Cif _pdbx_validate_torsion LoopLength = 6 24 Cif _pdbx_validate_torsion ListOfLines 24 Cif _pdbx_validate_torsion.id 24 Cif _pdbx_validate_torsion.PDB_model_num 24 Cif _pdbx_validate_torsion.auth_comp_id 24 Cif _pdbx_validate_torsion.auth_asym_id 24 Cif _pdbx_validate_torsion.auth_seq_id 24 Cif _pdbx_validate_torsion.PDB_ins_code 24 Cif _pdbx_validate_torsion.label_alt_id 24 Cif _pdbx_validate_torsion.phi 24 Cif _pdbx_validate_torsion.psi 25 Cif _pdbx_entity_nonpoly LoopLength = 4 25 Cif _pdbx_entity_nonpoly ListOfLines 25 Cif _pdbx_entity_nonpoly.entity_id 25 Cif _pdbx_entity_nonpoly.name 25 Cif _pdbx_entity_nonpoly.comp_id 26 Cif _pdbx_nonpoly_scheme LoopLength = 114 26 Cif _pdbx_nonpoly_scheme ListOfLines 26 Cif _pdbx_nonpoly_scheme.asym_id 26 Cif _pdbx_nonpoly_scheme.entity_id 26 Cif _pdbx_nonpoly_scheme.mon_id 26 Cif _pdbx_nonpoly_scheme.ndb_seq_num 26 Cif _pdbx_nonpoly_scheme.pdb_seq_num 26 Cif _pdbx_nonpoly_scheme.auth_seq_num 26 Cif _pdbx_nonpoly_scheme.pdb_mon_id 26 Cif _pdbx_nonpoly_scheme.auth_mon_id 26 Cif _pdbx_nonpoly_scheme.pdb_strand_id 26 Cif _pdbx_nonpoly_scheme.pdb_ins_code
store/synthetases/4Q6G.cif Crystal Structure of the C-terminal domain of AcKRS-1 bound with N-acetyl-lysine and ADPNP About organisms entity 1 gene_src_taxid 192952 gene_src_Name Methanosarcina mazei pdbx_org_TaxId 562 pdbx_org_Name Escherichia coli entity 1 gene_host_taxid 562 gene_host_Name Escherichia coli pdbx_org_TaxId 562 pdbx_org_Name Escherichia coli LabAsym AutAsym Entity A A 1 polymer man Pyrrolysine--tRNA B A 2 non-polymer syn PHOSPHOAMINOPHOSPHONIC C A 3 non-polymer syn 1,2-ETHANEDIOL D A 3 non-polymer syn 1,2-ETHANEDIOL E A 3 non-polymer syn 1,2-ETHANEDIOL F A 3 non-polymer syn 1,2-ETHANEDIOL G A 3 non-polymer syn 1,2-ETHANEDIOL H A 3 non-polymer syn 1,2-ETHANEDIOL I A 4 non-polymer syn N(6)-ACETYLLYSINE J A 5 water nat water ValuesOf SimpleKeys _entry.id 4Q6G _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.281 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4Q6G _pdbx_database_status.recvd_initial_deposition_date 2014-04-22 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _citation.id primary _citation.title Polyspecific pyrrolysyl-tRNA synthetases from directed evolution. _citation.journal_abbrev Proc.Natl.Acad.Sci.USA _citation.journal_volume 111 _citation.page_first 16724 _citation.page_last 16729 _citation.year 2014 _citation.journal_id_ASTM PNASA6 _citation.country US _citation.journal_id_ISSN 0027-8424 _citation.journal_id_CSD 0040 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 25385624 _citation.pdbx_database_id_DOI 10.1073/pnas.1419737111 _cell.entry_id 4Q6G _cell.length_a 105.031 _cell.length_b 105.031 _cell.length_c 70.731 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? _symmetry.entry_id 4Q6G _symmetry.space_group_name_H-M P 64 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 172 _symmetry.space_group_name_Hall ? _entity_name_com.entity_id 1 _entity_name_com.name AcKRS-1, Pyrrolysine--tRNA(Pyl) ligase, Pyrrolysyl-tRNA synthetase, PylRS _entity_poly.entity_id 1 _entity_poly.type polypeptide(L) _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code PALTKSQTDRLEVLLNPKDEISLNSGKPFRELESELLSRRKKDLQQIYAEERENYLGKLEREITRFFVDRGFLEIKSPIL IPLEYIERMGIDNDTELSKQIFRVDKNFCLRPMVAPNIFNYARKLDRALPDPIKIFEIGPCYRKESDGKEHLEEFTMLNF FQMGSGCTRENLESIITDFLNHLGIDFKIVGDSCSVYGDTLDVMHGDLELSSAVVGPIPLDREWGIDKPWIGAGFGLERL LKVKHDFKNIKRAARSESYYNGISTNL _entity_poly.pdbx_seq_one_letter_code_can PALTKSQTDRLEVLLNPKDEISLNSGKPFRELESELLSRRKKDLQQIYAEERENYLGKLEREITRFFVDRGFLEIKSPIL IPLEYIERMGIDNDTELSKQIFRVDKNFCLRPMVAPNIFNYARKLDRALPDPIKIFEIGPCYRKESDGKEHLEEFTMLNF FQMGSGCTRENLESIITDFLNHLGIDFKIVGDSCSVYGDTLDVMHGDLELSSAVVGPIPLDREWGIDKPWIGAGFGLERL LKVKHDFKNIKRAARSESYYNGISTNL _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene pylS, MM_1445 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name Methanosarcina mazei _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 192952 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name Escherichia coli _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code PYLS_METMA _struct_ref.pdbx_db_accession Q8PWY1 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code PALTKSQTDRLEVLLNPKDEISLNSGKPFRELESELLSRRKKDLQQIYAEERENYLGKLEREITRFFVDRGFLEIKSPIL IPLEYIERMGIDNDTELSKQIFRVDKNFCLRPMLAPNLYNYLRKLDRALPDPIKIFEIGPCYRKESDGKEHLEEFTMLNF CQMGSGCTRENLESIITDFLNHLGIDFKIVGDSCMVYGDTLDVMHGDLELSSAVVGPIPLDREWGIDKPWIGAGFGLERL LKVKHDFKNIKRAARSESYYNGISTNL _struct_ref.pdbx_align_begin 188 _struct_ref.pdbx_db_isoform ? _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4Q6G _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 267 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q8PWY1 _struct_ref_seq.db_align_beg 188 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 454 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 188 _struct_ref_seq.pdbx_auth_seq_align_end 454 _exptl.entry_id 4Q6G _exptl.method X-RAY DIFFRACTION _exptl.crystals_number 1 _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.66 _exptl_crystal.density_percent_sol 66.35 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method VAPOR DIFFUSION, SITTING DROP _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.0 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details 50 mM Tris, pH 8.0, 23% PEG2000 MME, VAPOR DIFFUSION, SITTING DROP, temperature 293K _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type ADSC QUANTUM 315r _diffrn_detector.pdbx_collection_date 2008-11-23 _diffrn_detector.details ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator Rosenbaum-Rock double crystal Si(111) _diffrn_radiation.pdbx_diffrn_protocol SINGLE WAVELENGTH _diffrn_radiation.pdbx_scattering_type x-ray _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0809 _diffrn_radiation_wavelength.wt 1.0 _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type NSLS BEAMLINE X29A _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X29A _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.0809 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 4Q6G _reflns.observed_criterion_sigma_I 2.6 _reflns.observed_criterion_sigma_F 2.6 _reflns.d_resolution_low 90.909 _reflns.d_resolution_high 2.248 _reflns.number_obs 21010 _reflns.number_all 21278 _reflns.percent_possible_obs 98.7 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.048 _reflns.pdbx_netI_over_sigmaI 41.2 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 7.5 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _refine.pdbx_refine_id X-RAY DIFFRACTION _refine.entry_id 4Q6G _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 19912 _refine.ls_number_reflns_all 21010 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F . _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 90.909 _refine.ls_d_res_high 2.25 _refine.ls_percent_reflns_obs 98.66 _refine.ls_R_factor_obs 0.18737 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.18593 _refine.ls_R_factor_R_free 0.21443 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 1079 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.962 _refine.correlation_coeff_Fo_to_Fc_free 0.952 _refine.B_iso_mean 60.752 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS _refine.pdbx_starting_model PDB ENTRY 2Q7G _refine.pdbx_method_to_determine_struct MOLECULAR REPLACEMENT _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values MAXIMUM LIKELIHOOD _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.206 _refine.pdbx_overall_ESU_R_Free 0.171 _refine.overall_SU_ML 0.117 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 4.679 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine_hist.pdbx_refine_id X-RAY DIFFRACTION _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2167 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 68 _refine_hist.number_atoms_solvent 106 _refine_hist.number_atoms_total 2341 _refine_hist.d_res_high 2.25 _refine_hist.d_res_low 90.909 _refine_ls_shell.pdbx_refine_id X-RAY DIFFRACTION _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.248 _refine_ls_shell.d_res_low 2.307 _refine_ls_shell.number_reflns_R_work 1320 _refine_ls_shell.R_factor_R_work 0.260 _refine_ls_shell.percent_reflns_obs 88.39 _refine_ls_shell.R_factor_R_free 0.297 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 73 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_obs ? _pdbx_refine.pdbx_refine_id X-RAY DIFFRACTION _pdbx_refine.entry_id 4Q6G _pdbx_refine.R_factor_all_no_cutoff ? _pdbx_refine.R_factor_obs_no_cutoff ? _pdbx_refine.free_R_factor_no_cutoff ? _pdbx_refine.free_R_error_no_cutoff ? _pdbx_refine.free_R_val_test_set_size_perc_no_cutoff ? _pdbx_refine.free_R_val_test_set_ct_no_cutoff ? _pdbx_refine.R_factor_all_4sig_cutoff ? _pdbx_refine.R_factor_obs_4sig_cutoff ? _pdbx_refine.free_R_factor_4sig_cutoff ? _pdbx_refine.free_R_val_test_set_size_perc_4sig_cutoff ? _pdbx_refine.free_R_val_test_set_ct_4sig_cutoff ? _pdbx_refine.number_reflns_obs_4sig_cutoff ? _struct.entry_id 4Q6G _struct.title Crystal Structure of the C-terminal domain of AcKRS-1 bound with N-acetyl-lysine and ADPNP _struct.pdbx_descriptor Pyrrolysine--tRNA ligase (E.C.6.1.1.26) _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? _struct_keywords.entry_id 4Q6G _struct_keywords.pdbx_keywords LIGASE _struct_keywords.text tRNA synthetase, tRNA, amino acids, LIGASE _struct_biol.id 1 _struct_biol.details ? _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? _database_PDB_matrix.entry_id 4Q6G _atom_sites.entry_id 4Q6G _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type identity operation _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type Structure model _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type Initial release _pdbx_audit_revision_details.description ? _pdbx_entry_details.entry_id 4Q6G _pdbx_entry_details.nonpolymer_details BIOCHEMICAL EVIDENCE SUGGESTS THAT THE ACETYL END OF LIGAND D ALY 2005 MAY NOT BE AS WELL-ORDERED AS THE REST OF THE LIGAND. _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ?

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